FFCP PHASE1:Hg19::chr11:59057020..59057028,-: Difference between revisions
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|id=chr11:59057020..59057028,-
|short_description=p1@ENST00000532980
|description=CAGE_peak_1_at_ENST00000532980_5end
|association_with_transcript=-61bp_to_ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-61bp_to_ENST00000532980_5end | |||
|cluster_id=chr11:59057020..59057028,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_1_at_ENST00000532980_5end | |||
|id=chr11:59057020..59057028,- | |||
|ontology_enrichment_celltype=CL:0002057!2.40e-57!42;CL:0002194!1.80e-53!63;CL:0000576!1.80e-53!63;CL:0000040!1.80e-53!63;CL:0000559!1.80e-53!63;CL:0000860!3.87e-53!45;CL:0002009!1.20e-51!65;CL:0000839!1.56e-47!70;CL:0000557!8.83e-47!71;CL:0000766!1.32e-46!76;CL:0000738!1.66e-36!140;CL:0002087!2.13e-36!119;CL:0000763!3.43e-34!112;CL:0000049!3.43e-34!112;CL:0002031!2.17e-32!124;CL:0000037!4.39e-32!172;CL:0000566!4.39e-32!172;CL:0000988!6.88e-30!182;CL:0002032!8.08e-28!165;CL:0000837!8.08e-28!165;CL:0002393!3.04e-17!9;CL:0002397!3.04e-17!9;CL:0000784!6.25e-15!3;CL:0000134!3.22e-11!358;CL:0002320!7.60e-11!365;CL:0000219!1.56e-09!390;CL:0000048!5.81e-08!430;CL:0000723!9.71e-08!436;CL:0000034!1.88e-07!444;CL:0002619!7.83e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.27e-39;33!CL:0002057;2.27e-39;33!CL:0000473;1.20e-28;39!CL:0000234;1.20e-28;39!CL:0000576;2.03e-22;48!CL:0000766;1.31e-09;69!CL:0000784;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.21e-34,42;CL:0002057,3.21e-34,42;CL:0000473,6.75e-30,48;CL:0000234,6.75e-30,48;CL:0002194,7.76e-24,59;CL:0000576,7.76e-24,59;CL:0000040,7.76e-24,59;CL:0000559,7.76e-24,59;CL:0002009,4.71e-23,61;CL:0000839,2.67e-21,66;CL:0000557,5.58e-21,67;CL:0000766,1.64e-19,72;CL:0000738,2.78e-15,136;CL:0002087,6.15e-15,115;CL:0002031,2.70e-14,120;CL:0000763,6.86e-13,108;CL:0000049,6.86e-13,108;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177;CL:0002032,1.66e-10,161;CL:0000837,1.66e-10,161;CL:0000784,2.79e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.86e-26;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.83e-41!80;UBERON:0001474!1.50e-37!86;UBERON:0002390!1.84e-35!102;UBERON:0003061!1.84e-35!102;UBERON:0002193!1.07e-31!112;UBERON:0004765!4.89e-31!101;UBERON:0001434!4.89e-31!101;UBERON:0002405!8.92e-31!115;UBERON:0002204!3.28e-16!167;UBERON:0003081!1.90e-15!216;UBERON:0002384!2.45e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.80e-18,76;UBERON:0001474,4.23e-17,82;UBERON:0004765,1.50e-15,90;UBERON:0002405,4.89e-15,93;UBERON:0002390,3.00e-14,98;UBERON:0003061,3.00e-14,98;UBERON:0001434,5.88e-14,100;UBERON:0002193,6.86e-13,108;UBERON:0002204,3.89e-08,167 | |||
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|short_description=p1@ENST00000532980 | |||
}} | }} |
Latest revision as of 23:10, 23 July 2015
Short description: | p1@ENST00000532980 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000532980_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -61bp_to_ENST00000532980_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.21e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.21e-34 | 42 |
defensive cell | 6.75e-30 | 48 |
phagocyte | 6.75e-30 | 48 |
monopoietic cell | 7.76e-24 | 59 |
monocyte | 7.76e-24 | 59 |
monoblast | 7.76e-24 | 59 |
promonocyte | 7.76e-24 | 59 |
macrophage dendritic cell progenitor | 4.71e-23 | 61 |
myeloid lineage restricted progenitor cell | 2.67e-21 | 66 |
granulocyte monocyte progenitor cell | 5.58e-21 | 67 |
myeloid leukocyte | 1.64e-19 | 72 |
leukocyte | 2.78e-15 | 136 |
nongranular leukocyte | 6.15e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.70e-14 | 120 |
myeloid cell | 6.86e-13 | 108 |
common myeloid progenitor | 6.86e-13 | 108 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.66e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-10 | 161 |
plasmacytoid dendritic cell | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.80e-18 | 76 |
bone element | 4.23e-17 | 82 |
skeletal element | 1.50e-15 | 90 |
immune system | 4.89e-15 | 93 |
hematopoietic system | 3.00e-14 | 98 |
blood island | 3.00e-14 | 98 |
skeletal system | 5.88e-14 | 100 |
hemolymphoid system | 6.86e-13 | 108 |
musculoskeletal system | 3.89e-08 | 167 |