FFCP PHASE1:Hg19::chr11:59051831..59051840,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-325bp_to_ENST00000399003_5end | |association_with_transcript=-325bp_to_ENST00000399003_5end | ||
|cluster_id=chr11:59051831..59051840,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_1_at_ENST00000399003_5end | |description=CAGE_peak_1_at_ENST00000399003_5end | ||
|id=chr11:59051831..59051840,- | |id=chr11:59051831..59051840,- | ||
|ontology_enrichment_celltype=CL:0000945!3.10e-34!24;CL:0000826!3.10e-34!24;CL:0000236!2.84e-18!14;CL:0000738!1.15e-17!140;CL:0000784!1.70e-17!3;CL:0000542!2.56e-16!53;CL:0000051!2.56e-16!53;CL:0002087!4.43e-16!119;CL:0000037!9.83e-15!172;CL:0000566!9.83e-15!172;CL:0000838!2.53e-14!52;CL:0002031!1.05e-13!124;CL:0000988!1.28e-13!182;CL:0002032!1.89e-11!165;CL:0000837!1.89e-11!165 | |ontology_enrichment_celltype=CL:0000945!3.10e-34!24;CL:0000826!3.10e-34!24;CL:0000236!2.84e-18!14;CL:0000738!1.15e-17!140;CL:0000784!1.70e-17!3;CL:0000542!2.56e-16!53;CL:0000051!2.56e-16!53;CL:0002087!4.43e-16!119;CL:0000037!9.83e-15!172;CL:0000566!9.83e-15!172;CL:0000838!2.53e-14!52;CL:0002031!1.05e-13!124;CL:0000988!1.28e-13!182;CL:0002032!1.89e-11!165;CL:0000837!1.89e-11!165 | ||
|ontology_enrichment_celltype_v019=CL:0000784;4.71e-75;3!CL:0000236;1.29e-30;13!CL:0000451;3.79e-21;10!CL:0000945;7.43e-17;24!CL:0000542;3.65e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,4.72e-75,3;CL:0000236,1.60e-28,14;CL:0000451,3.79e-21,10;CL:0000945,6.98e-17,24;CL:0000826,6.98e-17,24;CL:0000738,6.88e-09,136;CL:0000838,4.99e-08,52;CL:0000542,6.96e-08,53;CL:0000051,6.96e-08,53;CL:0000037,3.48e-07,168;CL:0000988,8.17e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0001045;8.64e-26;1!CL:0000051;3.65e-08;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.28e-08!10 | |ontology_enrichment_disease=DOID:0060058!2.28e-08!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.09e-15!3;UBERON:0004854!1.09e-15!3;UBERON:0009034!1.09e-15!3;UBERON:0002095!1.09e-15!3;UBERON:0004782!1.09e-15!3;UBERON:0003281!1.09e-15!3;UBERON:0009664!1.09e-15!3;UBERON:0002296!1.09e-15!3;UBERON:0005602!1.09e-15!3;UBERON:0001179!1.09e-15!3;UBERON:0006293!1.09e-15!3;UBERON:0002193!4.45e-07!112;UBERON:0004177!5.34e-07!7;UBERON:0002390!6.94e-07!102;UBERON:0003061!6.94e-07!102;UBERON:0001154!8.21e-07!1;UBERON:0001153!8.21e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;8.64e-26;1!UBERON:0001153;8.64e-26;1!UBERON:0009854;8.64e-26;1!UBERON:0009856;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.26e-25,1;UBERON:0001153,1.26e-25,1;UBERON:0001045,1.26e-25,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.46480320348181,0.426507697462265,0.293600439334847,0,0,0.217010870715852,0,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0.689491361473237,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0.889509253863555,0,1.60158394814405,0.574752439954483,1.32208974556972,0.954053754535364,2.27685187643779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67773748054957,7.43593384014166,6.3147775226026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.322289439867886,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404112318087525,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.46480320348181,0.426507697462265,0.293600439334847,0,0,0.217010870715852,0,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0.689491361473237,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0.889509253863555,0,1.60158394814405,0.574752439954483,1.32208974556972,0.954053754535364,2.27685187643779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67773748054957,7.43593384014166,6.3147775226026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.322289439867886,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404112318087525,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p1@ENST00000399003 | |short_description=p1@ENST00000399003 | ||
}} | }} |
Latest revision as of 23:09, 23 July 2015
Short description: | p1@ENST00000399003 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000399003_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | -325bp_to_ENST00000399003_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 4.72e-75 | 3 |
B cell | 1.60e-28 | 14 |
dendritic cell | 3.79e-21 | 10 |
lymphocyte of B lineage | 6.98e-17 | 24 |
pro-B cell | 6.98e-17 | 24 |
leukocyte | 6.88e-09 | 136 |
lymphoid lineage restricted progenitor cell | 4.99e-08 | 52 |
lymphocyte | 6.96e-08 | 53 |
common lymphoid progenitor | 6.96e-08 | 53 |
hematopoietic stem cell | 3.48e-07 | 168 |
hematopoietic cell | 8.17e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.26e-25 | 1 |
caecum | 1.26e-25 | 1 |
midgut | 1.26e-25 | 1 |