FFCP PHASE1:Hg19::chr11:56457700..56457749,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-191bp_to_ENST00000530434_5end | |association_with_transcript=-191bp_to_ENST00000530434_5end | ||
|cluster_id=chr11:56457700..56457749,+ | |||
|coexpression_cluster_id=C248 | |||
|description=CAGE_peak_1_at_ENST00000530434_5end | |description=CAGE_peak_1_at_ENST00000530434_5end | ||
|id=chr11:56457700..56457749,+ | |id=chr11:56457700..56457749,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.23e-15!42;CL:0000860!4.66e-13!45;CL:0000839!6.80e-10!70;CL:0000557!1.71e-09!71;CL:0000766!3.19e-09!76;CL:0002009!6.34e-09!65;CL:0000763!2.00e-08!112;CL:0000049!2.00e-08!112;CL:0002194!3.14e-08!63;CL:0000576!3.14e-08!63;CL:0000040!3.14e-08!63;CL:0000559!3.14e-08!63;CL:0000738!6.82e-08!140;CL:0002031!1.64e-07!124;CL:0000037!7.85e-07!172;CL:0000566!7.85e-07!172 | |ontology_enrichment_celltype=CL:0002057!4.23e-15!42;CL:0000860!4.66e-13!45;CL:0000839!6.80e-10!70;CL:0000557!1.71e-09!71;CL:0000766!3.19e-09!76;CL:0002009!6.34e-09!65;CL:0000763!2.00e-08!112;CL:0000049!2.00e-08!112;CL:0002194!3.14e-08!63;CL:0000576!3.14e-08!63;CL:0000040!3.14e-08!63;CL:0000559!3.14e-08!63;CL:0000738!6.82e-08!140;CL:0002031!1.64e-07!124;CL:0000037!7.85e-07!172;CL:0000566!7.85e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.23e-23;33!CL:0002057;5.23e-23;33!CL:0000473;4.58e-19;39!CL:0000234;4.58e-19;39!CL:0000576;5.61e-15;48!CL:0000766;1.16e-11;69!CL:0000197;1.10e-07;6!CL:0000098;1.10e-07;6!CL:0002167;1.10e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.75e-29,48;CL:0000234,3.75e-29,48;CL:0000860,2.19e-28,42;CL:0002057,2.19e-28,42;CL:0000839,1.37e-24,66;CL:0000557,4.05e-24,67;CL:0000766,1.97e-22,72;CL:0002009,3.99e-22,61;CL:0002194,1.26e-20,59;CL:0000576,1.26e-20,59;CL:0000040,1.26e-20,59;CL:0000559,1.26e-20,59;CL:0000763,3.10e-20,108;CL:0000049,3.10e-20,108;CL:0000738,5.77e-16,136;CL:0002031,3.91e-15,120;CL:0000037,3.86e-14,168;CL:0002032,1.07e-13,161;CL:0000837,1.07e-13,161;CL:0000988,1.81e-12,177;CL:0002087,2.17e-10,115;CL:0000197,1.00e-07,6;CL:0000098,1.00e-07,6;CL:0002167,1.00e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;3.71e-20;42!CL:0000049;2.16e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.26e-09!80;UBERON:0001474!7.04e-08!86;UBERON:0004765!5.34e-07!101;UBERON:0001434!5.34e-07!101 | |ontology_enrichment_uberon=UBERON:0002371!3.26e-09!80;UBERON:0001474!7.04e-08!86;UBERON:0004765!5.34e-07!101;UBERON:0001434!5.34e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.83e-07;9!UBERON:0001557;1.83e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.11e-22,76;UBERON:0001474,3.00e-19,82;UBERON:0004765,2.21e-18,90;UBERON:0002405,4.00e-18,93;UBERON:0001434,4.60e-15,100;UBERON:0002390,1.71e-14,98;UBERON:0003061,1.71e-14,98;UBERON:0002193,1.50e-13,108;UBERON:0002204,1.23e-09,167;UBERON:0001737,1.50e-07,9 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.704772020479856,0,0,1.74467704820074,0,0,0.783556884599516,0,0,0,0.527533956456907,0,0.662794751455832,19.4974292471015,10.8485015044316,18.2577522596843,10.2465887746006,0,0,0,0.286235987131057,0.273748850145768,0.376627918784408,0,0,0.0787107813136792,0.393364276848904,1.15148819429164,4.33485145285013,0,0,0,0.154934401160603,0.142169232487422,1.17440175733939,0,0.200544447470142,0,0,0,0,2.18097358169347,7.17964293008738,4.85168122375632,2.32429036905685,2.87817521615278,4.64559556342655,3.16461631554365,3.58624989140741,4.49316236788312,2.41321976515633,0,1.35426486594342,1.50593871634084,4.09359225086769,2.9214052977861,2.44867113896722,2.56743221660875,5.75403413219137,3.62836430205388,2.79249120670285,3.83602275479425,2.03146467040009,5.6738522469114,4.9825779919646,2.26123798731069,5.21482918420201,3.25783267057675,1.21079900526674,4.78760926783834,4.1140110367315,7.6051903072299,8.07896339867165,7.75736988380991,4.83013113929929,5.40636814229423,7.87555374815693,1.42506371870624,7.35991705636633,8.21988691940853,1.75996244461323,2.18455444504853,0,2.13365111283254,1.60158394814405,1.14950487990897,0.661044872784862,0.954053754535364,0,0,0,3.96513985737078,0.560508562981536,4.47752944117631,0,0,0.205601498999509,8.3593247695339,0.977766799900771,1.89379122293893,7.79306913631645,4.67923918917729,6.77593587192126,6.86755073209225,5.95768500283034,5.25174410875268,4.1618991219161,3.94650971048823,2.76350017785848,8.11448640058147,4.00373720537563,6.95606153033254,4.18142095219907,5.66546713487831,1.14966148080576,2.06176467289578,5.31341353240956,0.637130828648193,3.25541726928209,1.90090408889675,0.903450714466637,2.55973222308837,0,0.710331756132051,0,0.201606743224732,0.267440195783507,0,0,0.670700859703636,4.85877735005415,0,0,0.289693037921647,0.795285947051099,0,0.189069634328136,0.221729397462564,0.175669571386252,0,0,0,0,0.174129737299267,0,0.238490624305342,3.43196946468077,2.22874500797739,0,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,3.87780264148325,0,0,0.12663051166458,2.1185468930115,0,0,0,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0,0,0.70296429550139,0.312160076830321,0,0.149448680551801,0,0,0,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0.226864366320042,0.179389635688862,0.213557388818567,0,0,0.309157587715317,0.257640540045629,0.37223371266318,2.02531598689519,0.389748020644795,0,0.368199594569197,9.21382523867228,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0.310983165046111,4.28945446488568,5.83963774521328,0,0,0,0.464367928031979,0,2.12952240071719,3.37169380156203,2.6511213287183,1.54411561825352,1.52515610864684,1.89816495288877,2.29213223872279,4.51309369788296,3.46272441251751,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.245976877086227,3.43135620597051,0.219500570817251,0,0,0.0925884451585296,0.325808305310325,0,0,3.94163376915261,8.21860859650752,0.144366447761074,7.87075371380238,4.94660795809955,0,0.858486162094873,0,0,0,0.93733833986777,5.87937448696008,5.81277898693785,0.0895585227028483,0.290633938513962,0,0,5.19485760678034,4.76854665743776,5.18831832301061,3.53478813593864,4.57184838903617,0,1.17217447210047,0,0,8.70994867747361,16.0062802273124,0,0,0.2933531432838,0.387815147273333,0,4.22651376278,0,1.04007436911366,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0,1.74306691720059,0.199945982364114,10.9461402577071,11.5519131029389,10.5416969741516,0,0,12.8373214536647,0.144781306667579,0.205476322550383,0,0.224170287987055,0.197030760201927,0,0,0,0,0,0,0,0.749007023947182,0,0,0.49076596687656,0,0.271265023699736,8.94274704582471,7.13715955188647,9.61984731707001,7.26276772954822,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0,0.783204629850962,0,0,0,0.106727557803444,0,0,0,1.24053903909388,2.14846762603287,0,0.384417447767103,0.511707249066704,0.160853921143607,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.348631135379878,0,0.601519410909855,0.0920809889358963,0,0.182091168006717,0,0,0.231046011313244,0,0,0.422206515571503,0,0,0,0,0,0,0.254876273045038,0,0,4.16593765627276,2.61435451024901,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0,0.214840489736547,0.145016693914229,0.255679882248303,0.178064071293475,0.495854746082934,0.192190067365106,0.765676274967505,0.4046311234222,0,0,0.6970372701606,0.616067160352178,0,0.869932992075073,0.18532421910392,0.143124886741991,0.372158369359667,0,0.190630193923825,0.255897791311334,0.42793898803392,0.318203247925937,0.78494864019923,0,0.274537029736055,0,0.404364963146632,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,10.4943160327461,0.608731130888112,0,0.281695602532241,5.59304273595801,7.17217999395784,0,0,0.211107635297664,0,0,0,0.288666338176536,0,0,0.282431402330337,0,0,0,0.22972340020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| ||
|short_description=p1@ENST00000530434 | |short_description=p1@ENST00000530434 | ||
}} | }} |
Latest revision as of 22:51, 23 July 2015
Short description: | p1@ENST00000530434 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000530434_5end |
Coexpression cluster: | C248_iPS_Aortic_Hep2_amygdala_acute_medial_Myoblast |
Association with transcript: | -191bp_to_ENST00000530434_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.75e-29 | 48 |
phagocyte | 3.75e-29 | 48 |
classical monocyte | 2.19e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.19e-28 | 42 |
myeloid lineage restricted progenitor cell | 1.37e-24 | 66 |
granulocyte monocyte progenitor cell | 4.05e-24 | 67 |
myeloid leukocyte | 1.97e-22 | 72 |
macrophage dendritic cell progenitor | 3.99e-22 | 61 |
monopoietic cell | 1.26e-20 | 59 |
monocyte | 1.26e-20 | 59 |
monoblast | 1.26e-20 | 59 |
promonocyte | 1.26e-20 | 59 |
myeloid cell | 3.10e-20 | 108 |
common myeloid progenitor | 3.10e-20 | 108 |
leukocyte | 5.77e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 3.91e-15 | 120 |
hematopoietic stem cell | 3.86e-14 | 168 |
hematopoietic oligopotent progenitor cell | 1.07e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.07e-13 | 161 |
hematopoietic cell | 1.81e-12 | 177 |
nongranular leukocyte | 2.17e-10 | 115 |
receptor cell | 1.00e-07 | 6 |
sensory epithelial cell | 1.00e-07 | 6 |
olfactory epithelial cell | 1.00e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.11e-22 | 76 |
bone element | 3.00e-19 | 82 |
skeletal element | 2.21e-18 | 90 |
immune system | 4.00e-18 | 93 |
skeletal system | 4.60e-15 | 100 |
hematopoietic system | 1.71e-14 | 98 |
blood island | 1.71e-14 | 98 |
hemolymphoid system | 1.50e-13 | 108 |
musculoskeletal system | 1.23e-09 | 167 |
larynx | 1.50e-07 | 9 |