FFCP PHASE1:Hg19::chr11:47379989..47380003,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:47379989..47380003,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_at_chr11:47379989..47380003,+ | |description=CAGE_peak_at_chr11:47379989..47380003,+ | ||
|id=chr11:47379989..47380003,+ | |id=chr11:47379989..47380003,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.66e-65!42;CL:0000860!2.50e-60!45;CL:0000763!1.87e-50!112;CL:0000049!1.87e-50!112;CL:0000766!1.15e-43!76;CL:0002194!2.84e-42!63;CL:0000576!2.84e-42!63;CL:0000040!2.84e-42!63;CL:0000559!2.84e-42!63;CL:0002009!1.05e-40!65;CL:0000037!5.27e-40!172;CL:0000566!5.27e-40!172;CL:0000839!1.41e-39!70;CL:0000557!6.78e-39!71;CL:0000988!4.59e-37!182;CL:0002032!9.51e-37!165;CL:0000837!9.51e-37!165;CL:0000738!1.39e-29!140;CL:0002087!3.77e-29!119;CL:0002031!4.08e-24!124;CL:0000134!3.17e-12!358;CL:0002320!9.75e-12!365;CL:0000775!3.08e-10!3;CL:0000219!5.02e-10!390;CL:0000842!1.14e-09!3;CL:0000048!5.34e-08!430;CL:0000723!1.03e-07!436;CL:0000034!2.40e-07!444;CL:0000224!2.44e-07!4 | |ontology_enrichment_celltype=CL:0002057!2.66e-65!42;CL:0000860!2.50e-60!45;CL:0000763!1.87e-50!112;CL:0000049!1.87e-50!112;CL:0000766!1.15e-43!76;CL:0002194!2.84e-42!63;CL:0000576!2.84e-42!63;CL:0000040!2.84e-42!63;CL:0000559!2.84e-42!63;CL:0002009!1.05e-40!65;CL:0000037!5.27e-40!172;CL:0000566!5.27e-40!172;CL:0000839!1.41e-39!70;CL:0000557!6.78e-39!71;CL:0000988!4.59e-37!182;CL:0002032!9.51e-37!165;CL:0000837!9.51e-37!165;CL:0000738!1.39e-29!140;CL:0002087!3.77e-29!119;CL:0002031!4.08e-24!124;CL:0000134!3.17e-12!358;CL:0002320!9.75e-12!365;CL:0000775!3.08e-10!3;CL:0000219!5.02e-10!390;CL:0000842!1.14e-09!3;CL:0000048!5.34e-08!430;CL:0000723!1.03e-07!436;CL:0000034!2.40e-07!444;CL:0000224!2.44e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.02e-45;33!CL:0002057;7.02e-45;33!CL:0000473;2.89e-33;39!CL:0000234;2.89e-33;39!CL:0000576;6.38e-29;48!CL:0000766;1.60e-20;69!CL:0000775;1.04e-14;3!CL:0000226;2.11e-14;3!CL:0000842;2.11e-14;3!CL:0000763;4.50e-12;100!CL:0002087;2.88e-10;104!CL:0000738;1.64e-09;136!CL:0002393;7.82e-08;6!CL:0002397;7.82e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.47e-51,42;CL:0002057,8.47e-51,42;CL:0000473,3.44e-44,48;CL:0000234,3.44e-44,48;CL:0000766,5.94e-37,72;CL:0002194,6.28e-35,59;CL:0000576,6.28e-35,59;CL:0000040,6.28e-35,59;CL:0000559,6.28e-35,59;CL:0002009,9.86e-34,61;CL:0000839,4.70e-31,66;CL:0000557,1.45e-30,67;CL:0000763,5.83e-24,108;CL:0000049,5.83e-24,108;CL:0000738,1.10e-23,136;CL:0002087,2.85e-22,115;CL:0000037,1.04e-18,168;CL:0000988,1.24e-17,177;CL:0002031,3.38e-16,120;CL:0002032,2.62e-15,161;CL:0000837,2.62e-15,161;CL:0000775,1.08e-14,3;CL:0000226,2.96e-14,3;CL:0000842,2.96e-14,3;CL:0000134,1.87e-07,354;CL:0002320,2.97e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;9.12e-35;42!UBERON:0005425;3.28e-11;1!CL:0000049;6.32e-08;108 | |||
|ontology_enrichment_disease=DOID:8692!4.14e-10!31;DOID:1240!1.60e-07!39;DOID:2531!2.87e-07!51;DOID:0060083!2.87e-07!51 | |ontology_enrichment_disease=DOID:8692!4.14e-10!31;DOID:1240!1.60e-07!39;DOID:2531!2.87e-07!51;DOID:0060083!2.87e-07!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.65e-33!80;UBERON:0002390!8.64e-32!102;UBERON:0003061!8.64e-32!102;UBERON:0001474!1.52e-30!86;UBERON:0002193!6.62e-30!112;UBERON:0004765!1.14e-24!101;UBERON:0001434!1.14e-24!101;UBERON:0002405!3.96e-22!115;UBERON:0002204!1.84e-11!167;UBERON:0002384!4.50e-11!375;UBERON:0003081!1.17e-10!216 | |ontology_enrichment_uberon=UBERON:0002371!1.65e-33!80;UBERON:0002390!8.64e-32!102;UBERON:0003061!8.64e-32!102;UBERON:0001474!1.52e-30!86;UBERON:0002193!6.62e-30!112;UBERON:0004765!1.14e-24!101;UBERON:0001434!1.14e-24!101;UBERON:0002405!3.96e-22!115;UBERON:0002204!1.84e-11!167;UBERON:0002384!4.50e-11!375;UBERON:0003081!1.17e-10!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.28e-11;1!UBERON:0001785;3.28e-11;1!UBERON:0002464;3.28e-11;1!UBERON:0004904;3.28e-11;1!UBERON:0001021;3.28e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.73e-27,76;UBERON:0002390,1.63e-26,98;UBERON:0003061,1.63e-26,98;UBERON:0001474,1.20e-24,82;UBERON:0002193,7.37e-24,108;UBERON:0004765,2.77e-22,90;UBERON:0002405,1.68e-21,93;UBERON:0001434,7.42e-20,100;UBERON:0003081,1.43e-11,203;UBERON:0000941,2.18e-11,1;UBERON:0001785,2.18e-11,1;UBERON:0002464,2.18e-11,1;UBERON:0004904,2.18e-11,1;UBERON:0001021,2.18e-11,1;UBERON:0003902,2.18e-11,1;UBERON:0005425,2.18e-11,1;UBERON:0002204,5.16e-11,167;UBERON:0002384,5.58e-07,371 | |||
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|short_description=p@chr11:47379989..47380003,+ | |short_description=p@chr11:47379989..47380003,+ | ||
}} | }} |
Latest revision as of 22:36, 23 July 2015
Short description: | p@chr11:47379989..47380003, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:47379989..47380003, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.47e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.47e-51 | 42 |
defensive cell | 3.44e-44 | 48 |
phagocyte | 3.44e-44 | 48 |
myeloid leukocyte | 5.94e-37 | 72 |
monopoietic cell | 6.28e-35 | 59 |
monocyte | 6.28e-35 | 59 |
monoblast | 6.28e-35 | 59 |
promonocyte | 6.28e-35 | 59 |
macrophage dendritic cell progenitor | 9.86e-34 | 61 |
myeloid lineage restricted progenitor cell | 4.70e-31 | 66 |
granulocyte monocyte progenitor cell | 1.45e-30 | 67 |
myeloid cell | 5.83e-24 | 108 |
common myeloid progenitor | 5.83e-24 | 108 |
leukocyte | 1.10e-23 | 136 |
nongranular leukocyte | 2.85e-22 | 115 |
hematopoietic stem cell | 1.04e-18 | 168 |
hematopoietic cell | 1.24e-17 | 177 |
hematopoietic lineage restricted progenitor cell | 3.38e-16 | 120 |
hematopoietic oligopotent progenitor cell | 2.62e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.62e-15 | 161 |
neutrophil | 1.08e-14 | 3 |
single nucleate cell | 2.96e-14 | 3 |
mononuclear cell | 2.96e-14 | 3 |
mesenchymal cell | 1.87e-07 | 354 |
connective tissue cell | 2.97e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.73e-27 | 76 |
hematopoietic system | 1.63e-26 | 98 |
blood island | 1.63e-26 | 98 |
bone element | 1.20e-24 | 82 |
hemolymphoid system | 7.37e-24 | 108 |
skeletal element | 2.77e-22 | 90 |
immune system | 1.68e-21 | 93 |
skeletal system | 7.42e-20 | 100 |
lateral plate mesoderm | 1.43e-11 | 203 |
cranial nerve II | 2.18e-11 | 1 |
cranial nerve | 2.18e-11 | 1 |
nerve trunk | 2.18e-11 | 1 |
nerve connecting eye with brain | 2.18e-11 | 1 |
nerve | 2.18e-11 | 1 |
retinal neural layer | 2.18e-11 | 1 |
presumptive neural retina | 2.18e-11 | 1 |
musculoskeletal system | 5.16e-11 | 167 |
connective tissue | 5.58e-07 | 371 |