FFCP PHASE1:Hg19::chr11:46934513..46934519,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:46934513..46934519,+
|short_description=p@chr11:46934513..46934519,+
|description=CAGE_peak_at_chr11:46934513..46934519,+
|association_with_transcript=NA
...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:46934513..46934519,+ | |||
|description=CAGE_peak_at_chr11:46934513..46934519,+ | |||
|id=chr11:46934513..46934519,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.29e-15!254;CL:0002202!1.24e-14!9;CL:0002632!1.24e-14!9;CL:0002368!4.02e-13!13;CL:0002328!3.80e-12!3;CL:0002076!3.60e-11!43;CL:0000223!1.09e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000307;2.83e-66;3!CL:0002202;5.43e-23;9!CL:0002632;5.43e-23;9!CL:0002368;2.73e-16;13!CL:0000333;2.80e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.35e-66,3;CL:0000069,3.35e-66,3;CL:0000307,3.35e-66,3;CL:0000377,3.35e-66,3;CL:0002202,5.74e-23,9;CL:0002632,5.74e-23,9;CL:0002368,2.84e-16,13 | |||
|ontology_enrichment_development_v019=CL:0000377;2.83e-66;3 | |||
|ontology_enrichment_disease=DOID:1749!1.02e-18!14;DOID:305!1.77e-15!106;DOID:0050687!2.92e-14!143;DOID:162!1.95e-09!235;DOID:14566!4.48e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:169;1.27e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0004815!3.80e-12!3;UBERON:0002031!3.80e-12!3;UBERON:0002185!3.35e-09!4;UBERON:0007196!3.94e-09!14;UBERON:0001558!3.94e-09!14;UBERON:0003343!2.10e-08!4;UBERON:0004785!2.10e-08!4;UBERON:0000344!4.13e-07!12;UBERON:0003729!8.48e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003126;3.40e-29;7!UBERON:0001005;3.40e-29;7!UBERON:0007196;2.85e-14;15!UBERON:0001558;2.85e-14;15!UBERON:0000013;2.80e-11;5!UBERON:0002410;2.80e-11;5!UBERON:0000072;3.52e-07;37!UBERON:0005178;3.53e-07;34!UBERON:0002224;3.53e-07;34!UBERON:0000010;7.69e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.65e-29,7;UBERON:0001005,3.65e-29,7;UBERON:0007196,2.94e-14,15;UBERON:0001558,2.94e-14,15;UBERON:0000013,2.66e-11,5;UBERON:0002410,2.66e-11,5;UBERON:0005178,7.16e-07,34;UBERON:0002224,7.16e-07,34;UBERON:0000010,7.48e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68120910214315,4.3556393944529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.74988244777264,0.909894705249887,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0.107824811396682,4.71797825567689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.366857197043358,0.693153996902029,0,0,0,0,0,0,0,0.655087670040387,0.147856086217045,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0.630832124175395,0.327796715891087,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0,0,0,0.569822880276821,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68120910214315,4.3556393944529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.74988244777264,0.909894705249887,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0.107824811396682,4.71797825567689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.366857197043358,0.693153996902029,0,0,0,0,0,0,0,0.655087670040387,0.147856086217045,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0.630832124175395,0.327796715891087,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0,0,0,0.569822880276821,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:46934513..46934519,+ | |||
}} | }} |
Latest revision as of 22:31, 23 July 2015
Short description: | p@chr11:46934513..46934519, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:46934513..46934519, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.35e-66 | 3 |
branched duct epithelial cell | 3.35e-66 | 3 |
tracheal epithelial cell | 3.35e-66 | 3 |
tracheoblast | 3.35e-66 | 3 |
epithelial cell of tracheobronchial tree | 5.74e-23 | 9 |
epithelial cell of lower respiratory tract | 5.74e-23 | 9 |
respiratory epithelial cell | 2.84e-16 | 13 |
Ontology term | p-value | n |
---|---|---|
trachea | 3.65e-29 | 7 |
respiratory airway | 3.65e-29 | 7 |
tracheobronchial tree | 2.94e-14 | 15 |
lower respiratory tract | 2.94e-14 | 15 |
sympathetic nervous system | 2.66e-11 | 5 |
autonomic nervous system | 2.66e-11 | 5 |
thoracic cavity element | 7.16e-07 | 34 |
thoracic cavity | 7.16e-07 | 34 |
peripheral nervous system | 7.48e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.22e-09 | 6 |