FFCP PHASE1:Hg19::chr11:29358219..29358226,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:29358219..29358226,- | |||
|description=CAGE_peak_at_chr11:29358219..29358226,- | |description=CAGE_peak_at_chr11:29358219..29358226,- | ||
|id=chr11:29358219..29358226,- | |id=chr11:29358219..29358226,- | ||
|ontology_enrichment_celltype=CL:0000359!1.94e-30!32;CL:0000192!1.50e-24!42;CL:0000514!1.50e-24!42;CL:0000055!4.42e-19!180;CL:0000187!5.67e-18!54;CL:0002595!3.01e-17!5;CL:0000680!9.14e-17!57;CL:0000056!9.14e-17!57;CL:0000355!9.14e-17!57;CL:0002539!1.60e-16!10;CL:0000183!4.97e-16!59;CL:0000393!1.11e-15!60;CL:0000211!1.11e-15!60;CL:0000222!3.58e-08!119;CL:0002589!4.51e-08!2;CL:0000057!4.85e-08!75;CL:0002593!1.16e-07!2;CL:0000048!1.93e-07!430;CL:0000723!3.47e-07!436;CL:0000034!7.39e-07!444 | |ontology_enrichment_celltype=CL:0000359!1.94e-30!32;CL:0000192!1.50e-24!42;CL:0000514!1.50e-24!42;CL:0000055!4.42e-19!180;CL:0000187!5.67e-18!54;CL:0002595!3.01e-17!5;CL:0000680!9.14e-17!57;CL:0000056!9.14e-17!57;CL:0000355!9.14e-17!57;CL:0002539!1.60e-16!10;CL:0000183!4.97e-16!59;CL:0000393!1.11e-15!60;CL:0000211!1.11e-15!60;CL:0000222!3.58e-08!119;CL:0002589!4.51e-08!2;CL:0000057!4.85e-08!75;CL:0002593!1.16e-07!2;CL:0000048!1.93e-07!430;CL:0000723!3.47e-07!436;CL:0000034!7.39e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.62e-38;32!CL:0002539;1.38e-26;10!CL:0000192;2.97e-26;43!CL:0002595;1.05e-19;5!CL:0000187;2.11e-13;55!CL:0000511;1.25e-11;1!CL:0002625;1.25e-11;1!CL:0002566;1.25e-11;1!CL:0000216;1.25e-11;1!CL:0000393;1.19e-09;61!CL:0000211;1.19e-09;61 | |ontology_enrichment_celltype_v019=CL:0000359;4.62e-38;32!CL:0002539;1.38e-26;10!CL:0000192;2.97e-26;43!CL:0002595;1.05e-19;5!CL:0000187;2.11e-13;55!CL:0000511;1.25e-11;1!CL:0002625;1.25e-11;1!CL:0002566;1.25e-11;1!CL:0000216;1.25e-11;1!CL:0000393;1.19e-09;61!CL:0000211;1.19e-09;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.78e-38,32;CL:0000192,4.04e-28,43;CL:0000514,4.04e-28,43;CL:0002539,1.57e-26,10;CL:0000187,1.17e-21,55;CL:0000680,1.84e-20,58;CL:0000056,1.84e-20,58;CL:0000355,1.84e-20,58;CL:0002595,1.02e-19,5;CL:0000393,2.22e-19,61;CL:0000211,2.22e-19,61;CL:0000511,9.61e-12,1;CL:0002625,9.61e-12,1;CL:0000216,9.61e-12,1;CL:0002566,1.63e-11,1;CL:0000222,8.59e-11,121;CL:0002321,3.88e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;2.97e-26;43!CL:0000355;4.26e-10;58 | |ontology_enrichment_development_v019=CL:0000514;2.97e-26;43!CL:0000355;4.26e-10;58 | ||
|ontology_enrichment_disease=DOID:2394!3.08e-10!14 | |ontology_enrichment_disease=DOID:2394!3.08e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:3571;3.27e-12;1!DOID:3350;9.96e-07;2 | |ontology_enrichment_disease_v019=DOID:3571;3.27e-12;1!DOID:3350;9.96e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3571,3.27e-12,1;DOID:3350,9.96e-07,2 | |||
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|short_description=p@chr11:29358219..29358226,- | |short_description=p@chr11:29358219..29358226,- | ||
}} | }} |
Latest revision as of 21:23, 23 July 2015
Short description: | p@chr11:29358219..29358226, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:29358219..29358226, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.78e-38 | 32 |
smooth muscle cell | 4.04e-28 | 43 |
smooth muscle myoblast | 4.04e-28 | 43 |
aortic smooth muscle cell | 1.57e-26 | 10 |
muscle cell | 1.17e-21 | 55 |
muscle precursor cell | 1.84e-20 | 58 |
myoblast | 1.84e-20 | 58 |
multi-potent skeletal muscle stem cell | 1.84e-20 | 58 |
smooth muscle cell of the subclavian artery | 1.02e-19 | 5 |
electrically responsive cell | 2.22e-19 | 61 |
electrically active cell | 2.22e-19 | 61 |
androgen binding protein secreting cell | 9.61e-12 | 1 |
seminiferous tubule epithelial cell | 9.61e-12 | 1 |
Sertoli cell | 9.61e-12 | 1 |
dark melanocyte | 1.63e-11 | 1 |
mesodermal cell | 8.59e-11 | 121 |
embryonic cell | 3.88e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 3.27e-12 | 1 |
mesenchymal cell neoplasm | 9.96e-07 | 2 |