FFCP PHASE1:Hg19::chr11:29207409..29207435,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:29207409..29207435,+ | |||
|coexpression_cluster_id=C91 | |coexpression_cluster_id=C91 | ||
|description=CAGE_peak_at_chr11:29207409..29207435,+ | |description=CAGE_peak_at_chr11:29207409..29207435,+ | ||
|id=chr11:29207409..29207435,+ | |id=chr11:29207409..29207435,+ | ||
|ontology_enrichment_celltype=CL:1000306;3.35e-66;4!CL:0002547;3.35e-66;4!CL:0002539;6.13e-08;10 | |ontology_enrichment_celltype=CL:1000306!1.22e-12!4;CL:0002547!1.22e-12!4;CL:0000055!4.06e-11!180;CL:0000359!2.40e-09!32;CL:0000057!5.69e-09!75;CL:0002620!1.55e-07!23;CL:0000192!7.88e-07!42;CL:0000514!7.88e-07!42;CL:0002561!9.67e-07!1 | ||
| | |ontology_enrichment_celltype_v019=CL:1000306;3.35e-66;4!CL:0002547;3.35e-66;4!CL:0002539;6.13e-08;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:1000306,3.35e-66,4;CL:0002547,3.35e-66,4;CL:0002539,6.13e-08,10 | ||
|ontology_enrichment_uberon=UBERON:0004797;3.35e-66;4!UBERON:0000415;3.35e-66;4!UBERON:0007240;3.35e-66;4!UBERON:0005742;3.35e-66;4!UBERON:0005734;3.35e-66;4!UBERON:0004664;3.35e-66;4!UBERON:0004663;3.35e-66;4!UBERON:0000947;3.84e-29;21!UBERON:0010191;3.84e-29;21!UBERON:0004573;1.59e-17;33!UBERON:0004571;1.59e-17;33!UBERON:0001637;2.88e-14;42!UBERON:0003509;2.88e-14;42!UBERON:0004572;2.88e-14;42!UBERON:0007500;4.58e-09;56!UBERON:0001981;4.58e-09;56!UBERON:0004537;4.58e-09;56!UBERON:0000055;3.68e-08;65!UBERON:0004237;6.13e-08;10!UBERON:0004695;6.13e-08;10!UBERON:0002111;6.13e-08;10!UBERON:0004178;6.13e-08;10!UBERON:0002049;5.14e-07;75!UBERON:0007798;5.14e-07;75 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!8.10e-10!5;DOID:450!8.10e-10!5;DOID:66!8.10e-10!5;DOID:423!8.10e-10!5;DOID:0080000!8.10e-10!5;DOID:11722!8.10e-10!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000415!1.22e-12!4;UBERON:0007240!1.22e-12!4;UBERON:0005742!1.22e-12!4;UBERON:0005734!1.22e-12!4;UBERON:0004664!1.22e-12!4;UBERON:0004663!1.22e-12!4;UBERON:0004573!1.43e-11!33;UBERON:0004571!1.43e-11!33;UBERON:0001637!7.54e-11!42;UBERON:0003509!7.54e-11!42;UBERON:0004572!7.54e-11!42;UBERON:0001981!1.60e-08!60;UBERON:0007500!1.60e-08!60;UBERON:0004537!1.60e-08!60;UBERON:0006965!1.60e-08!60;UBERON:0004872!8.09e-08!84;UBERON:0002049!3.53e-07!79;UBERON:0007798!3.53e-07!79;UBERON:0000055!3.84e-07!69;UBERON:0005933!9.67e-07!1;UBERON:0005942!9.67e-07!1;UBERON:0005932!9.67e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;3.35e-66;4!UBERON:0000415;3.35e-66;4!UBERON:0007240;3.35e-66;4!UBERON:0005742;3.35e-66;4!UBERON:0005734;3.35e-66;4!UBERON:0004664;3.35e-66;4!UBERON:0004663;3.35e-66;4!UBERON:0000947;3.84e-29;21!UBERON:0010191;3.84e-29;21!UBERON:0004573;1.59e-17;33!UBERON:0004571;1.59e-17;33!UBERON:0001637;2.88e-14;42!UBERON:0003509;2.88e-14;42!UBERON:0004572;2.88e-14;42!UBERON:0007500;4.58e-09;56!UBERON:0001981;4.58e-09;56!UBERON:0004537;4.58e-09;56!UBERON:0000055;3.68e-08;65!UBERON:0004237;6.13e-08;10!UBERON:0004695;6.13e-08;10!UBERON:0002111;6.13e-08;10!UBERON:0004178;6.13e-08;10!UBERON:0002049;5.14e-07;75!UBERON:0007798;5.14e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,3.35e-66,4;UBERON:0007240,3.35e-66,4;UBERON:0005742,3.35e-66,4;UBERON:0005734,3.35e-66,4;UBERON:0004664,3.35e-66,4;UBERON:0004663,3.35e-66,4;UBERON:0004797,1.80e-38,7;UBERON:0000947,3.84e-29,21;UBERON:0010191,3.84e-29,21;UBERON:0004573,5.33e-19,33;UBERON:0004571,5.33e-19,33;UBERON:0001637,3.52e-15,42;UBERON:0003509,3.52e-15,42;UBERON:0004572,3.52e-15,42;UBERON:0007500,3.99e-11,59;UBERON:0001981,3.99e-11,59;UBERON:0004537,3.99e-11,59;UBERON:0006965,3.99e-11,59;UBERON:0000055,8.58e-10,68;UBERON:0002049,1.14e-08,78;UBERON:0007798,1.14e-08,78;UBERON:0004872,3.31e-08,83;UBERON:0004237,6.13e-08,10;UBERON:0004695,6.13e-08,10;UBERON:0002111,6.13e-08,10;UBERON:0004178,6.13e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01697543935533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,4.36950296683622,1.43418310374407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0.515281080091258,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0.405820753925408,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,0,0,0,0.15543720058278,0.147855149989634,0.477890301491107,0,0.621051827505038,0,0,0,0.450772826991655,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01697543935533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,4.36950296683622,1.43418310374407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0.515281080091258,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0.405820753925408,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,0,0,0,0.15543720058278,0.147855149989634,0.477890301491107,0,0.621051827505038,0,0,0,0.450772826991655,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:29207409..29207435,+ | |short_description=p@chr11:29207409..29207435,+ | ||
}} | }} |
Latest revision as of 21:22, 23 July 2015
Short description: | p@chr11:29207409..29207435, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:29207409..29207435, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 3.35e-66 | 4 |
fibroblast of the aortic adventitia | 3.35e-66 | 4 |
aortic smooth muscle cell | 6.13e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
artery wall | 3.35e-66 | 4 |
tunica adventitia of artery | 3.35e-66 | 4 |
adventitia | 3.35e-66 | 4 |
tunica adventitia of blood vessel | 3.35e-66 | 4 |
aorta tunica adventitia | 3.35e-66 | 4 |
aorta wall | 3.35e-66 | 4 |
blood vessel layer | 1.80e-38 | 7 |
aorta | 3.84e-29 | 21 |
aortic system | 3.84e-29 | 21 |
systemic artery | 5.33e-19 | 33 |
systemic arterial system | 5.33e-19 | 33 |
artery | 3.52e-15 | 42 |
arterial blood vessel | 3.52e-15 | 42 |
arterial system | 3.52e-15 | 42 |
epithelial tube open at both ends | 3.99e-11 | 59 |
blood vessel | 3.99e-11 | 59 |
blood vasculature | 3.99e-11 | 59 |
vascular cord | 3.99e-11 | 59 |
vessel | 8.58e-10 | 68 |
vasculature | 1.14e-08 | 78 |
vascular system | 1.14e-08 | 78 |
splanchnic layer of lateral plate mesoderm | 3.31e-08 | 83 |
blood vessel smooth muscle | 6.13e-08 | 10 |
arterial system smooth muscle | 6.13e-08 | 10 |
artery smooth muscle tissue | 6.13e-08 | 10 |
aorta smooth muscle tissue | 6.13e-08 | 10 |