FFCP PHASE1:Hg19::chr11:27159306..27159310,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:27159306..27159310,- | |||
|description=CAGE_peak_at_chr11:27159306..27159310,- | |description=CAGE_peak_at_chr11:27159306..27159310,- | ||
|id=chr11:27159306..27159310,- | |id=chr11:27159306..27159310,- | ||
|ontology_enrichment_celltype=CL:0000039!8.15e-08!7;CL:0000586!8.15e-08!7;CL:0000064!1.12e-07!3;CL:0005012!1.12e-07!3;CL:0000067!1.12e-07!3;CL:0002304!1.12e-07!3 | |ontology_enrichment_celltype=CL:0000039!8.15e-08!7;CL:0000586!8.15e-08!7;CL:0000064!1.12e-07!3;CL:0005012!1.12e-07!3;CL:0000067!1.12e-07!3;CL:0002304!1.12e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;6.73e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,6.73e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.05e-29;1!UBERON:0003056;9.43e-11;3 | |||
|ontology_enrichment_disease=DOID:305!1.87e-13!106;DOID:0050687!4.18e-13!143;DOID:14566!2.36e-08!239;DOID:162!1.56e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:3119;6.09e-19;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,7.78e-19,14 | |||
|ontology_enrichment_uberon=UBERON:0001778!1.12e-07!3;UBERON:0001775!1.12e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.05e-29;1!UBERON:0001785;2.05e-29;1!UBERON:0002464;2.05e-29;1!UBERON:0004904;2.05e-29;1!UBERON:0001021;2.05e-29;1!UBERON:0006562;1.91e-15;2!UBERON:0003714;1.91e-15;2!UBERON:0005162;1.91e-15;2!UBERON:0000122;1.91e-15;2!UBERON:0000945;4.79e-07;5!UBERON:0010039;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.33e-29,1;UBERON:0001785,1.33e-29,1;UBERON:0002464,1.33e-29,1;UBERON:0004904,1.33e-29,1;UBERON:0001021,1.33e-29,1;UBERON:0003902,1.33e-29,1;UBERON:0005425,1.33e-29,1;UBERON:0003714,1.54e-15,2;UBERON:0005162,1.54e-15,2;UBERON:0000122,1.54e-15,2;UBERON:0001781,1.96e-08,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0.341380344856499,0,0,1.03423011972439,0,0,0,0,0,0.110579259931225,0,0,0,0.278847488557207,0,0,0,0.0897576444097721,0.217294743844016,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0.728341138602278,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0.176512253383001,0,0,0,0,0.586654148204409,0,0,0.19980960958213,3.16998917739033,0,1.02956998717179,0,0.248505071130865,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.492137407573744,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0,0,0.276697269872462,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,1.42769420259154,0.490738592505128,0,0,0,0,0,0,0,0.60511520611056,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,1.14986184875636,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.170426809518315,0,0.22910686854405,0,0.955538938977433,0.335566295393377,0,0.121917924982269,0,0,0,0,0,0,0.118920090777569,0,0.329821550236287,0,0,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0.473314686579554,0.0679914901909147,0,0,0.371995018166751,0,0,0.126166424835079,0.218531143927391,0.126698501011437,0.101988829741982,0,0.0918948995348449,0.752122617877125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:27159306..27159310,- | |short_description=p@chr11:27159306..27159310,- | ||
}} | }} |
Latest revision as of 21:17, 23 July 2015
Short description: | p@chr11:27159306..27159310, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:27159306..27159310, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 6.73e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.33e-29 | 1 |
cranial nerve | 1.33e-29 | 1 |
nerve trunk | 1.33e-29 | 1 |
nerve connecting eye with brain | 1.33e-29 | 1 |
nerve | 1.33e-29 | 1 |
retinal neural layer | 1.33e-29 | 1 |
presumptive neural retina | 1.33e-29 | 1 |
neural tissue | 1.54e-15 | 2 |
multi cell component structure | 1.54e-15 | 2 |
neuron projection bundle | 1.54e-15 | 2 |
layer of retina | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 7.78e-19 | 14 |