FFCP PHASE1:Hg19::chr11:2402173..2402177,-: Difference between revisions
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|id=chr11:2402173..2402177,-
|short_description=p@chr11:2402173..2402177,-
|description=CAGE_peak_at_chr11:2402173..2402177,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:2402173..2402177,- | |||
|coexpression_cluster_id=C2120 | |||
|description=CAGE_peak_at_chr11:2402173..2402177,- | |||
|id=chr11:2402173..2402177,- | |||
|ontology_enrichment_celltype=CL:0000766!3.43e-20!76;CL:0000839!2.01e-17!70;CL:0000557!4.45e-17!71;CL:0000738!1.67e-15!140;CL:0002194!1.58e-13!63;CL:0000576!1.58e-13!63;CL:0000040!1.58e-13!63;CL:0000559!1.58e-13!63;CL:0002031!5.15e-13!124;CL:0002009!6.17e-13!65;CL:0002087!1.23e-11!119;CL:0000763!3.38e-11!112;CL:0000049!3.38e-11!112;CL:0000037!8.65e-11!172;CL:0000566!8.65e-11!172;CL:0002032!4.94e-10!165;CL:0000837!4.94e-10!165;CL:0000988!1.12e-09!182;CL:0002057!9.98e-09!42;CL:0002274!1.09e-08!5;CL:0000457!1.09e-08!5;CL:0002191!1.09e-08!5;CL:0000097!1.09e-08!5;CL:0000831!1.09e-08!5;CL:0002028!1.09e-08!5;CL:0000623!1.21e-08!3;CL:0000825!1.21e-08!3;CL:0000767!1.67e-08!3;CL:0002619!2.04e-08!3;CL:0000860!6.40e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.18e-28;5!CL:0002567;4.02e-21;3!CL:0000163;5.29e-16;9!CL:0000473;3.80e-13;39!CL:0000234;3.80e-13;39!CL:0000766;2.51e-11;69!CL:0000860;1.06e-10;33!CL:0002057;1.06e-10;33!CL:0000763;3.89e-08;100!CL:0000148;5.42e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.53e-28,5;CL:0002028,2.53e-28,5;CL:0002567,3.28e-21,3;CL:0000766,4.42e-20,72;CL:0000839,8.98e-18,66;CL:0000557,1.68e-17,67;CL:0000163,4.66e-16,9;CL:0000763,3.73e-13,108;CL:0000049,3.73e-13,108;CL:0000473,2.77e-11,48;CL:0000234,2.77e-11,48;CL:0000738,2.87e-10,136;CL:0002031,1.76e-09,120;CL:0000860,3.49e-09,42;CL:0002057,3.49e-09,42;CL:0002194,5.63e-09,59;CL:0000576,5.63e-09,59;CL:0000040,5.63e-09,59;CL:0000559,5.63e-09,59;CL:0002009,1.12e-08,61;CL:0002032,1.58e-08,161;CL:0000837,1.58e-08,161;CL:0000037,3.94e-08,168;CL:0000988,1.15e-07,177;CL:0000148,5.11e-07,10;CL:0000541,5.11e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;2.70e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.95e-15!112;UBERON:0002405!1.29e-14!115;UBERON:0002371!2.28e-14!80;UBERON:0002390!8.02e-14!102;UBERON:0003061!8.02e-14!102;UBERON:0001474!6.94e-13!86;UBERON:0004765!5.64e-10!101;UBERON:0001434!5.64e-10!101;UBERON:0001049!2.48e-08!57;UBERON:0005068!2.48e-08!57;UBERON:0006241!2.48e-08!57;UBERON:0007135!2.48e-08!57;UBERON:0007023!3.79e-08!115;UBERON:0003076!7.70e-07!15;UBERON:0003057!7.70e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.28e-15,76;UBERON:0001474,3.35e-14,82;UBERON:0004765,6.98e-13,90;UBERON:0002405,1.91e-12,93;UBERON:0002390,8.92e-12,98;UBERON:0003061,8.92e-12,98;UBERON:0001434,1.58e-11,100;UBERON:0002193,1.28e-10,108 | |||
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| ||
|short_description=p@chr11:2402173..2402177,- | |||
}} | }} |
Latest revision as of 21:11, 23 July 2015
Short description: | p@chr11:2402173..2402177, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2402173..2402177, - |
Coexpression cluster: | C2120_CD14_Mast_Neutrophils_CD4_Natural_CD8_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.53e-28 | 5 |
basophil mast progenitor cell | 2.53e-28 | 5 |
light melanocyte | 3.28e-21 | 3 |
myeloid leukocyte | 4.42e-20 | 72 |
myeloid lineage restricted progenitor cell | 8.98e-18 | 66 |
granulocyte monocyte progenitor cell | 1.68e-17 | 67 |
endocrine cell | 4.66e-16 | 9 |
myeloid cell | 3.73e-13 | 108 |
common myeloid progenitor | 3.73e-13 | 108 |
defensive cell | 2.77e-11 | 48 |
phagocyte | 2.77e-11 | 48 |
leukocyte | 2.87e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 1.76e-09 | 120 |
classical monocyte | 3.49e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.49e-09 | 42 |
monopoietic cell | 5.63e-09 | 59 |
monocyte | 5.63e-09 | 59 |
monoblast | 5.63e-09 | 59 |
promonocyte | 5.63e-09 | 59 |
macrophage dendritic cell progenitor | 1.12e-08 | 61 |
hematopoietic oligopotent progenitor cell | 1.58e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.58e-08 | 161 |
hematopoietic stem cell | 3.94e-08 | 168 |
hematopoietic cell | 1.15e-07 | 177 |
melanocyte | 5.11e-07 | 10 |
melanoblast | 5.11e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.28e-15 | 76 |
bone element | 3.35e-14 | 82 |
skeletal element | 6.98e-13 | 90 |
immune system | 1.91e-12 | 93 |
hematopoietic system | 8.92e-12 | 98 |
blood island | 8.92e-12 | 98 |
skeletal system | 1.58e-11 | 100 |
hemolymphoid system | 1.28e-10 | 108 |