FFCP PHASE1:Hg19::chr11:2159872..2159877,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-137bp_to_BC017277_5end | |association_with_transcript=-137bp_to_BC017277_5end | ||
|cluster_id=chr11:2159872..2159877,+ | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_18_at_BC017277_5end | |description=CAGE_peak_18_at_BC017277_5end | ||
|id=chr11:2159872..2159877,+ | |id=chr11:2159872..2159877,+ | ||
|ontology_enrichment_celltype=CL:0002541!4.83e-10!3;CL:0002536!2.15e-07!2;CL:0002575!5.62e-07!2 | |ontology_enrichment_celltype=CL:0002541!4.83e-10!3;CL:0002536!2.15e-07!2;CL:0002575!5.62e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.89e-33;19!CL:0002536;8.19e-21;2!CL:0002541;1.00e-14;3!CL:0002537;3.98e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.29e-33,19;CL:0002536,6.37e-21,2;CL:0002541,9.39e-15,3;CL:0002537,3.98e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.12e-11;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.02e-24!14;UBERON:0000158!1.02e-24!14;UBERON:0000478!4.78e-19!24;UBERON:0003124!1.77e-15!7;UBERON:0000305!4.22e-11!7;UBERON:0000476!4.83e-10!3;UBERON:0000920!4.83e-10!3;UBERON:0004871!1.18e-09!8;UBERON:0001987!1.77e-07!4;UBERON:0004340!1.77e-07!4;UBERON:0004923!4.11e-07!57 | |ontology_enrichment_uberon=UBERON:0005631!1.02e-24!14;UBERON:0000158!1.02e-24!14;UBERON:0000478!4.78e-19!24;UBERON:0003124!1.77e-15!7;UBERON:0000305!4.22e-11!7;UBERON:0000476!4.83e-10!3;UBERON:0000920!4.83e-10!3;UBERON:0004871!1.18e-09!8;UBERON:0001987!1.77e-07!4;UBERON:0004340!1.77e-07!4;UBERON:0004923!4.11e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.22e-36;10!UBERON:0000158;5.22e-36;10!UBERON:0000478;5.28e-33;24!UBERON:0000305;3.08e-23;7!UBERON:0003124;1.00e-14;3!UBERON:0000920;1.00e-14;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.54e-35,14;UBERON:0000158,7.54e-35,14;UBERON:0000478,4.47e-33,24;UBERON:0000305,2.67e-23,7;UBERON:0004871,1.99e-20,8;UBERON:0000920,9.39e-15,3;UBERON:0003124,7.36e-14,7;UBERON:0004923,7.43e-07,66 | |||
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| ||
|short_description=p18@BC017277 | |short_description=p18@BC017277 | ||
}} | }} |
Latest revision as of 21:03, 23 July 2015
Short description: | p18@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -137bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.29e-33 | 19 |
amniotic epithelial cell | 6.37e-21 | 2 |
chorionic membrane mesenchymal stem cell | 9.39e-15 | 3 |
amnion mesenchymal stem cell | 3.98e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.54e-35 | 14 |
membranous layer | 7.54e-35 | 14 |
extraembryonic structure | 4.47e-33 | 24 |
amnion | 2.67e-23 | 7 |
somatic layer of lateral plate mesoderm | 1.99e-20 | 8 |
egg chorion | 9.39e-15 | 3 |
chorion | 7.36e-14 | 7 |
organ component layer | 7.43e-07 | 66 |