FFCP PHASE1:Hg19::chr11:208684..208695,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:208684..208695,- to FFCP PHASE1:Hg19::chr11:208684..208695,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:208684..208695,- | |||
|description=CAGE_peak_at_chr11:208684..208695,- | |||
|id=chr11:208684..208695,- | |||
|ontology_enrichment_celltype=CL:0000738!3.63e-15!140;CL:0002031!2.22e-13!124;CL:0002087!6.93e-13!119;CL:0000037!9.75e-11!172;CL:0000566!9.75e-11!172;CL:0002032!1.41e-10!165;CL:0000837!1.41e-10!165;CL:0000988!1.33e-09!182;CL:0000766!6.15e-08!76;CL:0000557!7.96e-08!71;CL:0002009!4.98e-07!65;CL:0000542!6.83e-07!53;CL:0000051!6.83e-07!53;CL:0000839!7.08e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000346;5.16e-28;3!CL:1000428;5.16e-28;3!CL:0002559;4.49e-17;5!CL:0000623;5.46e-13;3!CL:0000895;2.28e-10;1!CL:0000791;2.56e-08;18!CL:0000789;2.56e-08;18!CL:0002419;2.56e-08;18!CL:0000097;3.78e-08;5!CL:0000624;6.28e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,3.27e-28,3;CL:1000428,3.27e-28,3;CL:0002559,3.42e-17,5;CL:0000623,4.03e-13,3;CL:0000825,4.03e-13,3;CL:0000810,3.96e-10,1;CL:0000895,3.96e-10,1;CL:0002436,3.96e-10,1;CL:0002427,3.96e-10,1;CL:0002428,3.96e-10,1;CL:0002429,3.96e-10,1;CL:0002433,3.96e-10,1;CL:0002431,3.96e-10,1;CL:0002432,3.96e-10,1;CL:0000738,5.35e-09,136;CL:0000791,2.94e-08,18;CL:0000789,2.94e-08,18;CL:0002420,2.94e-08,18;CL:0002419,2.94e-08,18;CL:0000790,2.94e-08,18;CL:0000097,5.61e-08,5;CL:0002028,5.61e-08,5;CL:0000037,6.92e-07,168;CL:0000624,9.53e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002427;2.28e-10;1!CL:0000790;2.56e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.38e-08!102;UBERON:0003061!8.38e-08!102;UBERON:0002405!1.64e-07!115;UBERON:0002193!1.75e-07!112;UBERON:0001474!6.75e-07!86;UBERON:0002371!9.47e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;5.16e-28;3!UBERON:0001992;5.16e-28;3!UBERON:0002073;4.49e-17;5!UBERON:0000996;2.28e-10;1!UBERON:0002067;9.85e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,3.27e-28,3;UBERON:0001992,3.27e-28,3;UBERON:0002073,3.42e-17,5;UBERON:0005086,3.42e-17,5;UBERON:0000996,1.89e-10,1;UBERON:0002067,8.49e-10,9;UBERON:0004016,8.49e-10,9;UBERON:0010083,8.49e-10,9 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0,0,0.305653622991805,0.246301768349837,0.236132343941038,0.393364276848904,0,0.464448369948228,0.919421224478927,0.6024118375565,0,0.232401601740905,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0.727752183563449,0,0,0,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0.545812300115692,0.898893937780338,0,0,1.27867425159808,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0.65156653411535,0.605399502633369,0.368277635987565,0,0.633765858935825,0.425208599930087,0.628975936525128,0.673971786878971,0.150176892841506,0.803627933485401,0.570025487482497,0.19891667719909,0.365328307529268,0,0.546138611262131,0.889509253863555,0.853460445133014,0,0,0,0.954053754535364,0.569212969109448,0,0,1.32171328579026,0,0.263384084775077,0.590129310341499,0.393010762749165,1.02800749499755,0,0,0.473447805734733,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0.384273959177026,0,0.164437904603676,0,0,0.296573126324121,0.267540828089713,0,0.113309342697566,1.14966148080576,0.34362744548263,0,0,0,0.950452044448374,0,0,0,0.473554504088034,0,2.21767417547206,0.802320587350522,1.88271725047639,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.327447688744282,0.364295288292542,0,0,0.348259474598534,0,0,0,0.371457501329565,0,0,0,0,0.419499436209906,0.550236083880135,0,0.516833518338658,0.35576626268671,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0.949265659568129,0.183201743930407,2.63560834872127,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0.300476117813194,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0,1.56449532329816,1.28648187638577,2.76269842704961,0,0.721879481669586,0.118306800039844,0,0.241011029883482,0,0,0.237270619111097,0.269662616320329,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0,0.277765335475589,0,0,0,0,0.234817388471643,0.144366447761074,0.462985512576611,0,0,1.71697232418975,0.246217006087397,0,0.445893486866185,0,0,0.283550194484773,0,0,0,0,0.088048434013226,1.03664057770386,0.864719720501769,1.2624243342638,0.063497894292169,0,0,0,0,0,0.285826432630578,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0.428933980974443,0,0.823240336780769,0,0,0,0.301439377059586,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0,0.336255431980582,1.77327684181734,0.431255149719035,1.28343036279748,0,0,0,0,0,0,0,1.24324654030811,0,0.500170521059677,0,0.207970861530807,0,0,0.234282829985426,0,0,0,0,0.553107505625109,0.173767228936166,0,0,0,0.431428401637234,1.60091336705167,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0.160853921143607,0,0,0.177561725313127,0.246381468041427,0.519254429183621,0,0.241718899183244,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0.902399225814824,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0,0.15350367472613,0.275673144969061,0,0.290033387828457,0,0.178064071293475,0.165284915360978,0,0.127612712494584,0.4046311234222,0,0,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0.42793898803392,0.318203247925937,0,0.359744915166629,0.54907405947211,0.117812402345686,0.202182481573316,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0.196498082026242,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,2.37937552888281,0.106824071127473,0,0,0.185803175125719,0.28853842595289,0.213425530045242,0,0,0.383010740264733,0,0,0,0.228234679033192,0.156679895773023,0,0,0.1605880751037,0,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0.334330152832435,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0.222617410045812,0.16480387422676,0,0.398495976502139,0,0,0,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0,0.185536196323703,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.179515288819544,0,0,0.641183153813036,0.533034776018635,0,0,0,0,0,0.503464760927528,0,0.158936578980379,0.421996129056054,0.163232808159148,0.282706142867882,0,0.995261931078505,0,0.611030144933625,0,0,0,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0.189559738885464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| 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| ||
|short_description=p@chr11:208684..208695,- | |||
}} | }} |
Latest revision as of 20:58, 23 July 2015
Short description: | p@chr11:208684..208695, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:208684..208695, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 3.27e-28 | 3 |
stem cell of epidermis | 3.27e-28 | 3 |
hair follicle cell | 3.42e-17 | 5 |
natural killer cell | 4.03e-13 | 3 |
pro-NK cell | 4.03e-13 | 3 |
CD4-positive, alpha-beta thymocyte | 3.96e-10 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.96e-10 | 1 |
mature CD4 single-positive thymocyte | 3.96e-10 | 1 |
resting double-positive thymocyte | 3.96e-10 | 1 |
double-positive blast | 3.96e-10 | 1 |
CD69-positive double-positive thymocyte | 3.96e-10 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 3.96e-10 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.96e-10 | 1 |
CD24-positive, CD4 single-positive thymocyte | 3.96e-10 | 1 |
leukocyte | 5.35e-09 | 136 |
mature alpha-beta T cell | 2.94e-08 | 18 |
alpha-beta T cell | 2.94e-08 | 18 |
immature T cell | 2.94e-08 | 18 |
mature T cell | 2.94e-08 | 18 |
immature alpha-beta T cell | 2.94e-08 | 18 |
mast cell | 5.61e-08 | 5 |
basophil mast progenitor cell | 5.61e-08 | 5 |
hematopoietic stem cell | 6.92e-07 | 168 |
CD4-positive, alpha-beta T cell | 9.53e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 3.27e-28 | 3 |
papillary layer of dermis | 3.27e-28 | 3 |
hair follicle | 3.42e-17 | 5 |
hair follicle placode | 3.42e-17 | 5 |
vagina | 1.89e-10 | 1 |
dermis | 8.49e-10 | 9 |
dermatome | 8.49e-10 | 9 |
future dermis | 8.49e-10 | 9 |