FFCP PHASE1:Hg19::chr11:1918296..1918324,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1918296..1918324,+ | |||
|coexpression_cluster_id=C430 | |coexpression_cluster_id=C430 | ||
|description=CAGE_peak_at_chr11:1918296..1918324,+ | |description=CAGE_peak_at_chr11:1918296..1918324,+ | ||
|id=chr11:1918296..1918324,+ | |id=chr11:1918296..1918324,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.05e-16!172;CL:0000566!1.05e-16!172;CL:0000763!1.23e-16!112;CL:0000049!1.23e-16!112;CL:0000766!2.91e-15!76;CL:0000988!8.53e-15!182;CL:0000839!6.31e-14!70;CL:0000557!1.36e-13!71;CL:0002194!3.75e-13!63;CL:0000576!3.75e-13!63;CL:0000040!3.75e-13!63;CL:0000559!3.75e-13!63;CL:0002032!5.40e-13!165;CL:0000837!5.40e-13!165;CL:0000738!1.33e-12!140;CL:0002009!1.78e-12!65;CL:0002057!2.06e-11!42;CL:0002087!2.30e-10!119;CL:0000860!3.20e-10!45;CL:0002393!4.19e-10!9;CL:0002397!4.19e-10!9;CL:0002031!2.28e-09!124 | |ontology_enrichment_celltype=CL:0000037!1.05e-16!172;CL:0000566!1.05e-16!172;CL:0000763!1.23e-16!112;CL:0000049!1.23e-16!112;CL:0000766!2.91e-15!76;CL:0000988!8.53e-15!182;CL:0000839!6.31e-14!70;CL:0000557!1.36e-13!71;CL:0002194!3.75e-13!63;CL:0000576!3.75e-13!63;CL:0000040!3.75e-13!63;CL:0000559!3.75e-13!63;CL:0002032!5.40e-13!165;CL:0000837!5.40e-13!165;CL:0000738!1.33e-12!140;CL:0002009!1.78e-12!65;CL:0002057!2.06e-11!42;CL:0002087!2.30e-10!119;CL:0000860!3.20e-10!45;CL:0002393!4.19e-10!9;CL:0002397!4.19e-10!9;CL:0002031!2.28e-09!124 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.56e-15;3!CL:0002619;2.55e-15;3!CL:0000763;3.79e-09;100!CL:0000235;9.00e-08;6!CL:0002393;9.89e-08;6!CL:0002397;9.89e-08;6!CL:0000576;2.57e-07;48!CL:0000766;4.29e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.33e-24,108;CL:0000049,3.33e-24,108;CL:0000037,6.13e-21,168;CL:0000988,1.55e-19,177;CL:0000784,8.49e-16,3;CL:0002032,9.68e-16,161;CL:0000837,9.68e-16,161;CL:0002619,1.46e-15,3;CL:0000766,6.89e-15,72;CL:0002194,1.72e-14,59;CL:0000576,1.72e-14,59;CL:0000040,1.72e-14,59;CL:0000559,1.72e-14,59;CL:0000839,1.77e-14,66;CL:0000557,3.25e-14,67;CL:0002009,6.42e-14,61;CL:0000738,1.67e-10,136;CL:0000473,1.12e-09,48;CL:0000234,1.12e-09,48;CL:0002393,1.06e-08,9;CL:0002397,1.06e-08,9;CL:0002087,5.25e-08,115;CL:0000235,1.14e-07,6;CL:0002031,1.59e-07,120;CL:0000134,3.89e-07,354;CL:0002320,7.22e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000049;2.74e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8692;1.25e-11;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.00e-11,31;DOID:1240,5.47e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.29e-33!115;UBERON:0002390!1.50e-15!102;UBERON:0003061!1.50e-15!102;UBERON:0001049!1.45e-14!57;UBERON:0005068!1.45e-14!57;UBERON:0006241!1.45e-14!57;UBERON:0007135!1.45e-14!57;UBERON:0002193!9.31e-14!112;UBERON:0003080!1.13e-13!42;UBERON:0002780!1.12e-12!41;UBERON:0001890!1.12e-12!41;UBERON:0006240!1.12e-12!41;UBERON:0002616!1.53e-12!59;UBERON:0002371!4.83e-12!80;UBERON:0001893!1.50e-10!34;UBERON:0001474!1.57e-10!86;UBERON:0000955!3.89e-10!69;UBERON:0006238!3.89e-10!69;UBERON:0002791!8.05e-10!33;UBERON:0005743!1.37e-09!86;UBERON:0001017!1.37e-09!82;UBERON:0002020!3.41e-09!34;UBERON:0003528!3.41e-09!34;UBERON:0003075!4.55e-09!86;UBERON:0007284!4.55e-09!86;UBERON:0001869!8.99e-09!32;UBERON:0002405!1.94e-08!115;UBERON:0002346!2.77e-08!90;UBERON:0003056!2.83e-08!61;UBERON:0004765!3.50e-08!101;UBERON:0001434!3.50e-08!101;UBERON:0000073!7.23e-08!94;UBERON:0001016!7.23e-08!94;UBERON:0002420!5.91e-07!9;UBERON:0007245!5.91e-07!9;UBERON:0010009!5.91e-07!9;UBERON:0010011!5.91e-07!9;UBERON:0000454!5.91e-07!9;UBERON:0009663!8.21e-07!7;UBERON:0002308!8.89e-07!9;UBERON:0000125!8.89e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!1.29e-33!115;UBERON:0002390!1.50e-15!102;UBERON:0003061!1.50e-15!102;UBERON:0001049!1.45e-14!57;UBERON:0005068!1.45e-14!57;UBERON:0006241!1.45e-14!57;UBERON:0007135!1.45e-14!57;UBERON:0002193!9.31e-14!112;UBERON:0003080!1.13e-13!42;UBERON:0002780!1.12e-12!41;UBERON:0001890!1.12e-12!41;UBERON:0006240!1.12e-12!41;UBERON:0002616!1.53e-12!59;UBERON:0002371!4.83e-12!80;UBERON:0001893!1.50e-10!34;UBERON:0001474!1.57e-10!86;UBERON:0000955!3.89e-10!69;UBERON:0006238!3.89e-10!69;UBERON:0002791!8.05e-10!33;UBERON:0005743!1.37e-09!86;UBERON:0001017!1.37e-09!82;UBERON:0002020!3.41e-09!34;UBERON:0003528!3.41e-09!34;UBERON:0003075!4.55e-09!86;UBERON:0007284!4.55e-09!86;UBERON:0001869!8.99e-09!32;UBERON:0002405!1.94e-08!115;UBERON:0002346!2.77e-08!90;UBERON:0003056!2.83e-08!61;UBERON:0004765!3.50e-08!101;UBERON:0001434!3.50e-08!101;UBERON:0000073!7.23e-08!94;UBERON:0001016!7.23e-08!94;UBERON:0002420!5.91e-07!9;UBERON:0007245!5.91e-07!9;UBERON:0010009!5.91e-07!9;UBERON:0010011!5.91e-07!9;UBERON:0000454!5.91e-07!9;UBERON:0009663!8.21e-07!7;UBERON:0002308!8.89e-07!9;UBERON:0000125!8.89e-07!9 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.50e-14,76;UBERON:0001474,1.05e-12,82;UBERON:0002390,2.04e-11,98;UBERON:0003061,2.04e-11,98;UBERON:0004765,2.91e-11,90;UBERON:0002405,8.73e-11,93;UBERON:0002193,5.18e-10,108;UBERON:0001434,8.74e-10,100 | |||
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| ||
|short_description=p@chr11:1918296..1918324,+ | |short_description=p@chr11:1918296..1918324,+ | ||
}} | }} |
Latest revision as of 20:47, 23 July 2015
Short description: | p@chr11:1918296..1918324, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1918296..1918324, + |
Coexpression cluster: | C430_acute_giant_chronic_CD34_CD133_melanoma_skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.33e-24 | 108 |
common myeloid progenitor | 3.33e-24 | 108 |
hematopoietic stem cell | 6.13e-21 | 168 |
hematopoietic cell | 1.55e-19 | 177 |
plasmacytoid dendritic cell | 8.49e-16 | 3 |
hematopoietic oligopotent progenitor cell | 9.68e-16 | 161 |
hematopoietic multipotent progenitor cell | 9.68e-16 | 161 |
adult endothelial progenitor cell | 1.46e-15 | 3 |
myeloid leukocyte | 6.89e-15 | 72 |
monopoietic cell | 1.72e-14 | 59 |
monocyte | 1.72e-14 | 59 |
monoblast | 1.72e-14 | 59 |
promonocyte | 1.72e-14 | 59 |
myeloid lineage restricted progenitor cell | 1.77e-14 | 66 |
granulocyte monocyte progenitor cell | 3.25e-14 | 67 |
macrophage dendritic cell progenitor | 6.42e-14 | 61 |
leukocyte | 1.67e-10 | 136 |
defensive cell | 1.12e-09 | 48 |
phagocyte | 1.12e-09 | 48 |
intermediate monocyte | 1.06e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.06e-08 | 9 |
nongranular leukocyte | 5.25e-08 | 115 |
macrophage | 1.14e-07 | 6 |
hematopoietic lineage restricted progenitor cell | 1.59e-07 | 120 |
mesenchymal cell | 3.89e-07 | 354 |
connective tissue cell | 7.22e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.50e-14 | 76 |
bone element | 1.05e-12 | 82 |
hematopoietic system | 2.04e-11 | 98 |
blood island | 2.04e-11 | 98 |
skeletal element | 2.91e-11 | 90 |
immune system | 8.73e-11 | 93 |
hemolymphoid system | 5.18e-10 | 108 |
skeletal system | 8.74e-10 | 100 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.00e-11 | 31 |
leukemia | 5.47e-09 | 39 |