FFCP PHASE1:Hg19::chr11:1918273..1918293,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1918273..1918293,+ | |||
|coexpression_cluster_id=C430 | |||
|description=CAGE_peak_at_chr11:1918273..1918293,+ | |description=CAGE_peak_at_chr11:1918273..1918293,+ | ||
|id=chr11:1918273..1918293,+ | |id=chr11:1918273..1918293,+ | ||
|ontology_enrichment_celltype=CL:0000763!1.76e-22!112;CL:0000049!1.76e-22!112;CL:0000037!1.95e-21!172;CL:0000566!1.95e-21!172;CL:0000557!1.18e-20!71;CL:0002009!4.59e-20!65;CL:0000988!4.92e-19!182;CL:0000766!1.26e-18!76;CL:0000839!1.37e-18!70;CL:0002194!1.98e-18!63;CL:0000576!1.98e-18!63;CL:0000040!1.98e-18!63;CL:0000559!1.98e-18!63;CL:0002032!1.38e-17!165;CL:0000837!1.38e-17!165;CL:0000738!1.92e-16!140;CL:0002031!4.47e-14!124;CL:0002087!6.32e-14!119;CL:0002057!3.14e-13!42;CL:0000860!7.89e-12!45;CL:0002393!9.86e-12!9;CL:0002397!9.86e-12!9 | |ontology_enrichment_celltype=CL:0000763!1.76e-22!112;CL:0000049!1.76e-22!112;CL:0000037!1.95e-21!172;CL:0000566!1.95e-21!172;CL:0000557!1.18e-20!71;CL:0002009!4.59e-20!65;CL:0000988!4.92e-19!182;CL:0000766!1.26e-18!76;CL:0000839!1.37e-18!70;CL:0002194!1.98e-18!63;CL:0000576!1.98e-18!63;CL:0000040!1.98e-18!63;CL:0000559!1.98e-18!63;CL:0002032!1.38e-17!165;CL:0000837!1.38e-17!165;CL:0000738!1.92e-16!140;CL:0002031!4.47e-14!124;CL:0002087!6.32e-14!119;CL:0002057!3.14e-13!42;CL:0000860!7.89e-12!45;CL:0002393!9.86e-12!9;CL:0002397!9.86e-12!9 | ||
|ontology_enrichment_celltype_v019=CL:0000235;3.12e-13;6!CL:0002393;3.12e-13;6!CL:0002397;3.12e-13;6!CL:0000763;1.27e-07;100!CL:0002619;1.46e-07;3!CL:0000767;2.50e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.90e-17,108;CL:0000049,4.90e-17,108;CL:0000037,5.96e-17,168;CL:0000988,8.81e-16,177;CL:0002032,6.14e-15,161;CL:0000837,6.14e-15,161;CL:0000235,3.98e-13,6;CL:0000766,4.79e-10,72;CL:0002194,2.68e-09,59;CL:0000576,2.68e-09,59;CL:0000040,2.68e-09,59;CL:0000559,2.68e-09,59;CL:0002009,6.35e-09,61;CL:0002393,9.04e-09,9;CL:0002397,9.04e-09,9;CL:0000738,1.30e-08,136;CL:0000473,2.67e-08,48;CL:0000234,2.67e-08,48;CL:0000839,4.38e-08,66;CL:0000557,6.23e-08,67;CL:0002619,1.07e-07,3;CL:0002087,2.43e-07,115;CL:0000767,3.24e-07,3;CL:0002031,6.66e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000049;5.96e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8692;2.35e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.83e-09,31;DOID:1240,2.93e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.82e-30!115;UBERON:0002390!1.83e-23!102;UBERON:0003061!1.83e-23!102;UBERON:0002193!1.13e-20!112;UBERON:0002371!3.86e-18!80;UBERON:0001474!5.98e-16!86;UBERON:0001049!6.28e-15!57;UBERON:0005068!6.28e-15!57;UBERON:0006241!6.28e-15!57;UBERON:0007135!6.28e-15!57;UBERON:0002405!3.56e-13!115;UBERON:0004765!2.22e-12!101;UBERON:0001434!2.22e-12!101;UBERON:0001017!1.18e-11!82;UBERON:0002780!1.36e-11!41;UBERON:0001890!1.36e-11!41;UBERON:0006240!1.36e-11!41;UBERON:0005743!1.76e-11!86;UBERON:0003080!3.74e-11!42;UBERON:0002616!7.16e-11!59;UBERON:0000955!4.16e-10!69;UBERON:0006238!4.16e-10!69;UBERON:0001893!7.92e-10!34;UBERON:0000073!2.11e-09!94;UBERON:0001016!2.11e-09!94;UBERON:0002791!4.09e-09!33;UBERON:0003075!6.63e-09!86;UBERON:0007284!6.63e-09!86;UBERON:0002020!1.39e-08!34;UBERON:0003528!1.39e-08!34;UBERON:0001869!3.81e-08!32;UBERON:0002346!4.25e-08!90 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.03e-09,98;UBERON:0003061,5.03e-09,98;UBERON:0002371,4.44e-08,76;UBERON:0002193,6.79e-08,108;UBERON:0001474,2.60e-07,82;UBERON:0002405,3.13e-07,93 | |||
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|short_description=p@chr11:1918273..1918293,+ | |short_description=p@chr11:1918273..1918293,+ | ||
}} | }} |
Latest revision as of 20:47, 23 July 2015
Short description: | p@chr11:1918273..1918293, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1918273..1918293, + |
Coexpression cluster: | C430_acute_giant_chronic_CD34_CD133_melanoma_skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.90e-17 | 108 |
common myeloid progenitor | 4.90e-17 | 108 |
hematopoietic stem cell | 5.96e-17 | 168 |
hematopoietic cell | 8.81e-16 | 177 |
hematopoietic oligopotent progenitor cell | 6.14e-15 | 161 |
hematopoietic multipotent progenitor cell | 6.14e-15 | 161 |
macrophage | 3.98e-13 | 6 |
myeloid leukocyte | 4.79e-10 | 72 |
monopoietic cell | 2.68e-09 | 59 |
monocyte | 2.68e-09 | 59 |
monoblast | 2.68e-09 | 59 |
promonocyte | 2.68e-09 | 59 |
macrophage dendritic cell progenitor | 6.35e-09 | 61 |
intermediate monocyte | 9.04e-09 | 9 |
CD14-positive, CD16-positive monocyte | 9.04e-09 | 9 |
leukocyte | 1.30e-08 | 136 |
defensive cell | 2.67e-08 | 48 |
phagocyte | 2.67e-08 | 48 |
myeloid lineage restricted progenitor cell | 4.38e-08 | 66 |
granulocyte monocyte progenitor cell | 6.23e-08 | 67 |
adult endothelial progenitor cell | 1.07e-07 | 3 |
nongranular leukocyte | 2.43e-07 | 115 |
basophil | 3.24e-07 | 3 |
hematopoietic lineage restricted progenitor cell | 6.66e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.03e-09 | 98 |
blood island | 5.03e-09 | 98 |
bone marrow | 4.44e-08 | 76 |
hemolymphoid system | 6.79e-08 | 108 |
bone element | 2.60e-07 | 82 |
immune system | 3.13e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.83e-09 | 31 |
leukemia | 2.93e-07 | 39 |