FFCP PHASE1:Hg19::chr11:18291505..18291520,-: Difference between revisions
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|id=chr11:18291505..18291520,-
|short_description=p2@CU675502
|description=CAGE_peak_2_at_CU675502_5end
|association_with_transcript=-104bp_to_CU675502_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-104bp_to_CU675502_5end | |||
|cluster_id=chr11:18291505..18291520,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_CU675502_5end | |||
|id=chr11:18291505..18291520,- | |||
|ontology_enrichment_celltype=CL:0000136!5.59e-34!15;CL:0002615!2.28e-20!3;CL:0002617!5.44e-14!2;CL:0000325!3.45e-12!39;CL:0000181!4.02e-09!12;CL:0000417!4.02e-09!12;CL:0000668!4.02e-09!12;CL:0000414!4.02e-09!12;CL:0000412!4.02e-09!12;CL:0000182!4.02e-09!12;CL:0002616!3.32e-08!1;CL:0002368!4.89e-08!13;CL:0000223!1.71e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.44e-42;13!CL:0002615;4.84e-30;3!CL:0002616;2.10e-23;1!CL:0000182;2.09e-17;12!CL:0002617;3.24e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.88e-36,15;CL:0002615,4.17e-30,3;CL:0002616,2.10e-23,1;CL:0000182,2.09e-17,12;CL:0002617,3.62e-12,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!1.87e-10!6;UBERON:0002358!1.87e-10!6;UBERON:0003684!1.87e-10!6;UBERON:0001178!1.87e-10!6;UBERON:0002365!1.23e-09!31;UBERON:0002330!1.23e-09!31;UBERON:0002107!1.17e-08!19;UBERON:0006925!1.17e-08!19;UBERON:0008836!1.17e-08!19;UBERON:0009569!1.17e-08!113;UBERON:0006122!4.99e-08!1;UBERON:0000029!6.10e-08!1;UBERON:0002363!1.18e-07!1;UBERON:0007647!1.18e-07!1;UBERON:0010115!1.18e-07!1;UBERON:0001282!1.87e-07!1;UBERON:0009842!1.87e-07!1;UBERON:0003704!1.87e-07!1;UBERON:0001171!1.87e-07!1;UBERON:0001172!1.87e-07!1;UBERON:0008835!1.92e-07!22;UBERON:0003894!1.92e-07!22;UBERON:0009854!4.16e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.19e-19;19!UBERON:0006925;4.19e-19;19!UBERON:0003688;1.41e-15;6!UBERON:0002358;1.41e-15;6!UBERON:0003684;1.41e-15;6!UBERON:0001178;1.41e-15;6!UBERON:0002423;1.24e-14;25!UBERON:0005406;2.07e-12;2!UBERON:0002365;2.88e-12;31!UBERON:0002330;2.88e-12;31!UBERON:0004457;1.02e-10;9!UBERON:0000042;1.02e-10;9!UBERON:0002368;5.98e-10;33!UBERON:0000949;2.14e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.19e-19,19;UBERON:0006925,4.19e-19,19;UBERON:0008836,4.19e-19,19;UBERON:0008835,1.45e-16,22;UBERON:0003894,1.45e-16,22;UBERON:0009854,7.24e-16,23;UBERON:0003688,1.31e-15,6;UBERON:0002358,1.31e-15,6;UBERON:0003684,1.31e-15,6;UBERON:0001178,1.31e-15,6;UBERON:0007499,1.24e-14,25;UBERON:0009497,1.24e-14,25;UBERON:0000015,1.24e-14,25;UBERON:0002423,1.24e-14,25;UBERON:0006235,1.24e-14,25;UBERON:0004161,1.24e-14,25;UBERON:0009856,4.35e-14,26;UBERON:0002417,2.72e-13,60;UBERON:0000916,2.72e-13,60;UBERON:0005406,2.07e-12,2;UBERON:0002365,6.96e-12,31;UBERON:0002330,6.96e-12,31;UBERON:0002368,1.43e-10,35;UBERON:0009569,1.58e-09,112;UBERON:0000949,2.67e-08,45;UBERON:0004457,2.75e-08,12;UBERON:0000042,2.75e-08,12;UBERON:0003929,5.73e-07,54;UBERON:0005172,5.73e-07,54;UBERON:0005173,5.73e-07,54 | |||
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|short_description=p2@CU675502 | |||
}} | }} |
Latest revision as of 20:37, 23 July 2015
Short description: | p2@CU675502 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CU675502_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -104bp_to_CU675502_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.88e-36 | 15 |
adipocyte of omentum tissue | 4.17e-30 | 3 |
perirenal adipocyte cell | 2.10e-23 | 1 |
hepatocyte | 2.09e-17 | 12 |
adipocyte of breast | 3.62e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 4.19e-19 | 19 |
digestive gland | 4.19e-19 | 19 |
liver bud | 4.19e-19 | 19 |
hepatic diverticulum | 1.45e-16 | 22 |
liver primordium | 1.45e-16 | 22 |
digestive tract diverticulum | 7.24e-16 | 23 |
omentum | 1.31e-15 | 6 |
peritoneum | 1.31e-15 | 6 |
abdominal cavity | 1.31e-15 | 6 |
visceral peritoneum | 1.31e-15 | 6 |
epithelial sac | 1.24e-14 | 25 |
epithelium of foregut-midgut junction | 1.24e-14 | 25 |
anatomical boundary | 1.24e-14 | 25 |
hepatobiliary system | 1.24e-14 | 25 |
foregut-midgut junction | 1.24e-14 | 25 |
septum transversum | 1.24e-14 | 25 |
sac | 4.35e-14 | 26 |
abdominal segment of trunk | 2.72e-13 | 60 |
abdomen | 2.72e-13 | 60 |
perirenal fat | 2.07e-12 | 2 |
exocrine gland | 6.96e-12 | 31 |
exocrine system | 6.96e-12 | 31 |
endocrine gland | 1.43e-10 | 35 |
subdivision of trunk | 1.58e-09 | 112 |
endocrine system | 2.67e-08 | 45 |
cavity lining | 2.75e-08 | 12 |
serous membrane | 2.75e-08 | 12 |
gut epithelium | 5.73e-07 | 54 |
abdomen element | 5.73e-07 | 54 |
abdominal segment element | 5.73e-07 | 54 |