FFCP PHASE1:Hg19::chr11:16946777..16946802,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:16946777..16946802,- | |||
|description=CAGE_peak_at_chr11:16946777..16946802,- | |description=CAGE_peak_at_chr11:16946777..16946802,- | ||
|id=chr11:16946777..16946802,- | |id=chr11:16946777..16946802,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:114;9.82e-37;2!DOID:178;2.71e-19;1!DOID:326;2.71e-19;1!DOID:3978;2.71e-19;1!DOID:3394;2.71e-19;1!DOID:5844;2.71e-19;1!DOID:1287;6.17e-19;4 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0007100;8.54e-26;25!UBERON:0002084;2.71e-19;1!UBERON:0002135;2.71e-19;1!UBERON:0007195;2.71e-19;1!UBERON:0002082;2.71e-19;1!UBERON:0002046;2.33e-15;5!UBERON:0002133;2.48e-10;2!UBERON:0000948;4.77e-08;22!UBERON:0003978;2.63e-07;3!UBERON:0004151;2.63e-07;3!UBERON:0000946;2.63e-07;3 | |ontology_enrichment_development_v019=UBERON:0004140;8.94e-20;1!UBERON:0010226;2.71e-19;1!UBERON:0007123;2.33e-15;5 | ||
|ontology_enrichment_disease=DOID:114!7.01e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;9.82e-37;2!DOID:178;2.71e-19;1!DOID:326;2.71e-19;1!DOID:3978;2.71e-19;1!DOID:3394;2.71e-19;1!DOID:5844;2.71e-19;1!DOID:1287;6.17e-19;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.69e-37,2;DOID:178,1.56e-19,1;DOID:326,1.56e-19,1;DOID:3978,1.56e-19,1;DOID:3394,1.56e-19,1;DOID:5844,1.56e-19,1;DOID:1287,4.70e-19,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.34e-21!115;UBERON:0004733!1.06e-11!12;UBERON:0002028!1.06e-11!12;UBERON:0007277!1.06e-11!12;UBERON:0004732!1.08e-10!13;UBERON:0002680!2.79e-09!9;UBERON:0001895!2.79e-09!9;UBERON:0010092!2.79e-09!9;UBERON:0003076!4.39e-09!15;UBERON:0003057!4.39e-09!15;UBERON:0003075!8.80e-09!86;UBERON:0007284!8.80e-09!86;UBERON:0002346!3.69e-08!90;UBERON:0000988!5.61e-08!3;UBERON:0001049!1.16e-07!57;UBERON:0005068!1.16e-07!57;UBERON:0006241!1.16e-07!57;UBERON:0007135!1.16e-07!57;UBERON:0000955!2.04e-07!69;UBERON:0006238!2.04e-07!69;UBERON:0002298!2.35e-07!8;UBERON:0002616!2.78e-07!59;UBERON:0000153!3.31e-07!129;UBERON:0007811!3.31e-07!129;UBERON:0005743!8.64e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;8.54e-26;25!UBERON:0002084;2.71e-19;1!UBERON:0002135;2.71e-19;1!UBERON:0007195;2.71e-19;1!UBERON:0002082;2.71e-19;1!UBERON:0002046;2.33e-15;5!UBERON:0002133;2.48e-10;2!UBERON:0000948;4.77e-08;22!UBERON:0003978;2.63e-07;3!UBERON:0004151;2.63e-07;3!UBERON:0000946;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.68e-24,27;UBERON:0002084,2.25e-19,1;UBERON:0002082,2.25e-19,1;UBERON:0010226,2.25e-19,1;UBERON:0002135,3.25e-19,1;UBERON:0007195,3.91e-19,1;UBERON:0002046,3.88e-15,5;UBERON:0004117,3.88e-15,5;UBERON:0007689,3.88e-15,5;UBERON:0007123,3.88e-15,5;UBERON:0003091,3.88e-15,5;UBERON:0002133,2.72e-10,2;UBERON:0003103,1.85e-09,68;UBERON:0007023,2.01e-07,114;UBERON:0000948,2.02e-07,24;UBERON:0005498,2.02e-07,24;UBERON:0004140,2.02e-07,24;UBERON:0009881,2.02e-07,24;UBERON:0004141,2.02e-07,24;UBERON:0003084,2.02e-07,24;UBERON:0007005,2.02e-07,24;UBERON:0004139,2.02e-07,24;UBERON:0004291,2.02e-07,24;UBERON:0009722,2.16e-07,11;UBERON:0007690,2.16e-07,11;UBERON:0004151,2.47e-07,3;UBERON:0003978,2.79e-07,3;UBERON:0009751,2.79e-07,3;UBERON:0000946,2.79e-07,3;UBERON:0002523,2.79e-07,3;UBERON:0005983,2.79e-07,3;UBERON:0002165,2.79e-07,3;UBERON:0002062,2.79e-07,3;UBERON:0007280,2.79e-07,3 | |||
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| ||
|short_description=p@chr11:16946777..16946802,- | |short_description=p@chr11:16946777..16946802,- | ||
}} | }} |
Latest revision as of 20:24, 23 July 2015
Short description: | p@chr11:16946777..16946802, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:16946777..16946802, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 5.68e-24 | 27 |
heart left ventricle | 2.25e-19 | 1 |
cardiac ventricle | 2.25e-19 | 1 |
future cardiac ventricle | 2.25e-19 | 1 |
mitral valve | 3.25e-19 | 1 |
stroma of bone marrow | 3.91e-19 | 1 |
thyroid gland | 3.88e-15 | 5 |
pharyngeal pouch | 3.88e-15 | 5 |
thyroid diverticulum | 3.88e-15 | 5 |
pharyngeal pouch 2 | 3.88e-15 | 5 |
thyroid primordium | 3.88e-15 | 5 |
atrioventricular valve | 2.72e-10 | 2 |
compound organ | 1.85e-09 | 68 |
adult organism | 2.01e-07 | 114 |
heart | 2.02e-07 | 24 |
primitive heart tube | 2.02e-07 | 24 |
primary heart field | 2.02e-07 | 24 |
anterior lateral plate mesoderm | 2.02e-07 | 24 |
heart tube | 2.02e-07 | 24 |
heart primordium | 2.02e-07 | 24 |
cardiac mesoderm | 2.02e-07 | 24 |
cardiogenic plate | 2.02e-07 | 24 |
heart rudiment | 2.02e-07 | 24 |
entire pharyngeal arch endoderm | 2.16e-07 | 11 |
early pharyngeal endoderm | 2.16e-07 | 11 |
cardiac chamber | 2.47e-07 | 3 |
valve | 2.79e-07 | 3 |
cardiac mesenchyme | 2.79e-07 | 3 |
cardial valve | 2.79e-07 | 3 |
tunica intima | 2.79e-07 | 3 |
heart layer | 2.79e-07 | 3 |
endocardium | 2.79e-07 | 3 |
endocardial cushion | 2.79e-07 | 3 |
presumptive endocardium | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.69e-37 | 2 |
vascular disease | 1.56e-19 | 1 |
ischemia | 1.56e-19 | 1 |
extrinsic cardiomyopathy | 1.56e-19 | 1 |
myocardial ischemia | 1.56e-19 | 1 |
myocardial infarction | 1.56e-19 | 1 |
cardiovascular system disease | 4.70e-19 | 4 |