FFCP PHASE1:Hg19::chr11:14712104..14712108,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:14712104..14712108,+ | |||
|coexpression_cluster_id=C736 | |||
|description=CAGE_peak_at_chr11:14712104..14712108,+ | |description=CAGE_peak_at_chr11:14712104..14712108,+ | ||
|id=chr11:14712104..14712108,+ | |id=chr11:14712104..14712108,+ | ||
|ontology_enrichment_celltype=CL:0000791!9.53e-10!18;CL:0000789!9.53e-10!18;CL:0002420!9.53e-10!18;CL:0002419!9.53e-10!18;CL:0000790!9.53e-10!18;CL:0000084!1.82e-09!25;CL:0000827!1.82e-09!25;CL:0000623!1.20e-08!3;CL:0000825!1.20e-08!3;CL:0000842!5.41e-08!3;CL:0000624!4.31e-07!6 | |ontology_enrichment_celltype=CL:0000791!9.53e-10!18;CL:0000789!9.53e-10!18;CL:0002420!9.53e-10!18;CL:0002419!9.53e-10!18;CL:0000790!9.53e-10!18;CL:0000084!1.82e-09!25;CL:0000827!1.82e-09!25;CL:0000623!1.20e-08!3;CL:0000825!1.20e-08!3;CL:0000842!5.41e-08!3;CL:0000624!4.31e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.78e-17;3!CL:0000791;1.76e-11;18!CL:0000789;1.76e-11;18!CL:0002419;1.76e-11;18!CL:0000624;2.30e-09;6!CL:0000084;2.51e-08;25!CL:0000771;1.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.95e-17,3;CL:0000825,2.95e-17,3;CL:0000791,1.58e-11,18;CL:0000789,1.58e-11,18;CL:0002420,1.58e-11,18;CL:0002419,1.58e-11,18;CL:0000790,1.58e-11,18;CL:0000624,1.99e-09,6;CL:0000084,2.33e-08,25;CL:0000827,2.33e-08,25;CL:0000838,2.46e-08,52;CL:0000542,3.59e-08,53;CL:0000051,3.59e-08,53;CL:0000771,1.05e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.72e-14;1!CL:0000790;1.76e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.72e-14;1!UBERON:0001785;9.72e-14;1!UBERON:0002464;9.72e-14;1!UBERON:0004904;9.72e-14;1!UBERON:0001021;9.72e-14;1!UBERON:0003714;1.64e-07;2!UBERON:0005162;1.64e-07;2!UBERON:0000122;1.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.55e-14,1;UBERON:0001785,7.55e-14,1;UBERON:0002464,7.55e-14,1;UBERON:0004904,7.55e-14,1;UBERON:0001021,7.55e-14,1;UBERON:0003902,7.55e-14,1;UBERON:0005425,7.55e-14,1;UBERON:0003714,1.45e-07,2;UBERON:0005162,1.45e-07,2;UBERON:0000122,1.45e-07,2 | |||
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| ||
|short_description=p@chr11:14712104..14712108,+ | |short_description=p@chr11:14712104..14712108,+ | ||
}} | }} |
Latest revision as of 20:19, 23 July 2015
Short description: | p@chr11:14712104..14712108, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:14712104..14712108, + |
Coexpression cluster: | C736_CD4_CD8_Natural_Neutrophils_Peripheral_Hepatocyte_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.95e-17 | 3 |
pro-NK cell | 2.95e-17 | 3 |
mature alpha-beta T cell | 1.58e-11 | 18 |
alpha-beta T cell | 1.58e-11 | 18 |
immature T cell | 1.58e-11 | 18 |
mature T cell | 1.58e-11 | 18 |
immature alpha-beta T cell | 1.58e-11 | 18 |
CD4-positive, alpha-beta T cell | 1.99e-09 | 6 |
T cell | 2.33e-08 | 25 |
pro-T cell | 2.33e-08 | 25 |
lymphoid lineage restricted progenitor cell | 2.46e-08 | 52 |
lymphocyte | 3.59e-08 | 53 |
common lymphoid progenitor | 3.59e-08 | 53 |
eosinophil | 1.05e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.55e-14 | 1 |
cranial nerve | 7.55e-14 | 1 |
nerve trunk | 7.55e-14 | 1 |
nerve connecting eye with brain | 7.55e-14 | 1 |
nerve | 7.55e-14 | 1 |
retinal neural layer | 7.55e-14 | 1 |
presumptive neural retina | 7.55e-14 | 1 |
neural tissue | 1.45e-07 | 2 |
multi cell component structure | 1.45e-07 | 2 |
neuron projection bundle | 1.45e-07 | 2 |