FFCP PHASE1:Hg19::chr11:14677258..14677277,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:14677258..14677277,+ | |||
|coexpression_cluster_id=C736 | |coexpression_cluster_id=C736 | ||
|description=CAGE_peak_at_chr11:14677258..14677277,+ | |description=CAGE_peak_at_chr11:14677258..14677277,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000084!5.28e-15!25;CL:0000827!5.28e-15!25;CL:0000838!7.39e-15!52;CL:0000542!1.78e-14!53;CL:0000051!1.78e-14!53;CL:0002087!2.59e-13!119;CL:0000624!4.08e-12!6;CL:0000738!4.28e-11!140;CL:0000791!5.94e-11!18;CL:0000789!5.94e-11!18;CL:0002420!5.94e-11!18;CL:0002419!5.94e-11!18;CL:0000790!5.94e-11!18;CL:0002031!1.66e-09!124;CL:0000623!5.51e-09!3;CL:0000825!5.51e-09!3;CL:0000037!5.54e-09!172;CL:0000566!5.54e-09!172;CL:0000842!9.33e-09!3;CL:0000988!4.85e-08!182;CL:0002032!1.93e-07!165;CL:0000837!1.93e-07!165;CL:0000815!8.30e-07!2;CL:0000792!8.30e-07!2;CL:0002677!8.30e-07!2 | |ontology_enrichment_celltype=CL:0000084!5.28e-15!25;CL:0000827!5.28e-15!25;CL:0000838!7.39e-15!52;CL:0000542!1.78e-14!53;CL:0000051!1.78e-14!53;CL:0002087!2.59e-13!119;CL:0000624!4.08e-12!6;CL:0000738!4.28e-11!140;CL:0000791!5.94e-11!18;CL:0000789!5.94e-11!18;CL:0002420!5.94e-11!18;CL:0002419!5.94e-11!18;CL:0000790!5.94e-11!18;CL:0002031!1.66e-09!124;CL:0000623!5.51e-09!3;CL:0000825!5.51e-09!3;CL:0000037!5.54e-09!172;CL:0000566!5.54e-09!172;CL:0000842!9.33e-09!3;CL:0000988!4.85e-08!182;CL:0002032!1.93e-07!165;CL:0000837!1.93e-07!165;CL:0000815!8.30e-07!2;CL:0000792!8.30e-07!2;CL:0002677!8.30e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000624;4.97e-38;6!CL:0000791;2.72e-28;18!CL:0000789;2.72e-28;18!CL:0002419;2.72e-28;18!CL:0000084;2.48e-20;25!CL:0000623;9.52e-20;3!CL:0000542;3.03e-09;53!CL:0000815;2.23e-08;2!CL:0000792;2.23e-08;2!CL:0002677;2.23e-08;2 | |ontology_enrichment_celltype_v019=CL:0000624;4.97e-38;6!CL:0000791;2.72e-28;18!CL:0000789;2.72e-28;18!CL:0002419;2.72e-28;18!CL:0000084;2.48e-20;25!CL:0000623;9.52e-20;3!CL:0000542;3.03e-09;53!CL:0000815;2.23e-08;2!CL:0000792;2.23e-08;2!CL:0002677;2.23e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.11e-38,6;CL:0000791,2.59e-28,18;CL:0000789,2.59e-28,18;CL:0002420,2.59e-28,18;CL:0002419,2.59e-28,18;CL:0000790,2.59e-28,18;CL:0000084,2.40e-20,25;CL:0000827,2.40e-20,25;CL:0000623,7.16e-20,3;CL:0000825,7.16e-20,3;CL:0000838,7.10e-17,52;CL:0000542,1.52e-16,53;CL:0000051,1.52e-16,53;CL:0000815,1.61e-08,2;CL:0000792,1.61e-08,2;CL:0002677,1.61e-08,2;CL:0000738,1.48e-07,136;CL:0002087,3.69e-07,115;CL:0002031,7.86e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;2.72e-28;18!CL:0000051;3.03e-09;53 | |ontology_enrichment_development_v019=CL:0000790;2.72e-28;18!CL:0000051;3.03e-09;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr11:14677258..14677277,+ | |short_description=p@chr11:14677258..14677277,+ | ||
}} | }} |
Latest revision as of 20:19, 23 July 2015
Short description: | p@chr11:14677258..14677277, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:14677258..14677277, + |
Coexpression cluster: | C736_CD4_CD8_Natural_Neutrophils_Peripheral_Hepatocyte_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 4.11e-38 | 6 |
mature alpha-beta T cell | 2.59e-28 | 18 |
alpha-beta T cell | 2.59e-28 | 18 |
immature T cell | 2.59e-28 | 18 |
mature T cell | 2.59e-28 | 18 |
immature alpha-beta T cell | 2.59e-28 | 18 |
T cell | 2.40e-20 | 25 |
pro-T cell | 2.40e-20 | 25 |
natural killer cell | 7.16e-20 | 3 |
pro-NK cell | 7.16e-20 | 3 |
lymphoid lineage restricted progenitor cell | 7.10e-17 | 52 |
lymphocyte | 1.52e-16 | 53 |
common lymphoid progenitor | 1.52e-16 | 53 |
regulatory T cell | 1.61e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.61e-08 | 2 |
naive regulatory T cell | 1.61e-08 | 2 |
leukocyte | 1.48e-07 | 136 |
nongranular leukocyte | 3.69e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 7.86e-07 | 120 |