FFCP PHASE1:Hg19::chr11:14328430..14328438,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:14328430..14328438,- | |||
|description=CAGE_peak_at_chr11:14328430..14328438,- | |description=CAGE_peak_at_chr11:14328430..14328438,- | ||
|id=chr11:14328430..14328438,- | |id=chr11:14328430..14328438,- | ||
|ontology_enrichment_celltype=CL:0000542!2.98e-07!53;CL:0000051!2.98e-07!53;CL:0000838!4.61e-07!52 | |ontology_enrichment_celltype=CL:0000542!2.98e-07!53;CL:0000051!2.98e-07!53;CL:0000838!4.61e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.93e-25;24!CL:0000236;2.53e-21;13!CL:0000542;1.90e-17;53!CL:0000623;1.93e-11;3!CL:0000222;5.30e-09;1!CL:0000791;5.51e-07;18!CL:0000789;5.51e-07;18!CL:0002419;5.51e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.74e-31,52;CL:0000542,1.63e-30,53;CL:0000051,1.63e-30,53;CL:0000945,4.31e-25,24;CL:0000826,4.31e-25,24;CL:0000236,7.01e-20,14;CL:0002087,2.85e-14,115;CL:0002031,1.47e-13,120;CL:0000623,1.15e-11,3;CL:0000825,1.15e-11,3;CL:0000738,1.26e-11,136;CL:0002032,2.26e-09,161;CL:0000837,2.26e-09,161;CL:0000037,7.35e-09,168;CL:0000988,2.91e-08,177;CL:0000791,3.80e-07,18;CL:0000789,3.80e-07,18;CL:0002420,3.80e-07,18;CL:0002419,3.80e-07,18;CL:0000790,3.80e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;1.90e-17;53!CL:0000790;5.51e-07;18 | |||
|ontology_enrichment_disease=DOID:0050687!1.09e-09!143;DOID:162!2.23e-08!235;DOID:14566!5.41e-08!239;DOID:305!6.88e-07!106 | |ontology_enrichment_disease=DOID:0050687!1.09e-09!143;DOID:162!2.23e-08!235;DOID:14566!5.41e-08!239;DOID:305!6.88e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:3112;5.30e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,4.91e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;5.30e-09;1!UBERON:0005056;5.30e-09;1!UBERON:0004176;5.30e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,5.75e-09,1;UBERON:0005056,5.75e-09,1 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,0.229240217243854,0.164201178899891,0.236132343941038,0,0.767658796194425,0,0,0,0,0.154934401160603,2.13253848731132,0,0,1.00272223735071,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,1.70692089026603,0.800791974072025,1.14950487990897,0.661044872784862,0,3.41527781465669,2.34894875748376,3.05818582500183,0,0,0,0.393419540227666,1.96505381374582,1.43921049299656,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0.296573126324121,0,1.04535523804977,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.604820229674197,1.33720097891754,1.88271725047639,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.351339142772504,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0.516833518338658,0.35576626268671,0,0,0,0,0,0,0.535798369704479,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.264818361626438,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0.469737994575059,0,0.280901613404497,0.61246251376468,0.245668634623536,0.206651562351531,0,0.247266929278557,0,0,0,0.375355559615893,0.277064115484183,0.438977620880838,0.612975591598039,0,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.515281080091258,0.18611685633159,0.843881661206331,0,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0,0.169560592310488,0.193260853163297,0,0,0.243947412259191,0,0,0,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0.61642896765115,0.179060963239896,0.560425719967636,1.97030760201927,0.862510299438069,2.18183161675572,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.347534457872331,0.195801157462741,0.343143423810856,0.206768026122887,0.862856803274467,0.426910231213777,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0.308097234229289,0.307007349452259,0.275673144969061,0.322260734604821,0,0.426133137080504,0,0,0,0.638063562472921,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.762520775695299,0,0,0,0,0.359744915166629,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.320472213382419,0,1.22520107990516,0.185803175125719,0,0.213425530045242,0.159426272728822,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0.18714054040822,0.293016358543788,0,0.111443384277478,0,0.23874448473769,0,0.614321404198464,0,0.281338832821026,0.779160935160341,0,0.63337622438398,0,0,1.0077309914171,0.306806047506464,1.10776324914963,0.311039587661807,0.269605053441981,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0.455173793141999,0,0,0.344743373241465,0.291604613383254,0,0,0,0,0.331737779793674,0,0.219385397153973,0.10893846351899,0.139423744278603,0.230850775511391,0,0.46112780877612,0.179515288819544,0.108647371922008,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0.189753732724185,0.317873157960757,0.632994193584081,0,0.141353071433941,0.216388639742091,0.995261931078505,0.176915129006678,0,0.296521128680622,0.247127877893006,0.313265848516366,0.067401132980677,0.802577647298789,0.234264445725339,0.182454789215666,0,0,0,0,0.30607276163049,0.126373159256976,0.300646838828985,0,0.664653872707185,0,0,0,0.284609546029793,0.277349346026277,0.347119476670262,1.27390116638691,0.174118413160805,0.17472666824203,0.343972064943233,0,0.146178634172371,0.246346371159628,0.193978032976839,0.176512253383001,0,0.548167698587004,0,0,0.391102765469606,0.160317640503067,0.85381197895741,0.19980960958213,0,0.114536596165916,0.171594997861965,0,0.372757606696298,0,0.271808412147228,0.627617077873999,0.203996435272644,0.288950589901519,0,0.136905378891993,0,0,0,0,0.687481272035051,0,0,0,0,0,0.360299883542404,0,0,0,0,0.393709926058995,0,0,0.408610218334727,0.321506296930038,0.687697182986169,0.415440338029185,0,0,0.121499113316049,0,0.236417121897595,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0,0,0,0.13223260174269,0.171086837884329,0.704815022316672,0.106787412567695,0.157204305099666,0.414239055347196,0.992332043623902,0.395223263795889,1.33971858218986,0.638341257770182,0,0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| ||
|short_description=p@chr11:14328430..14328438,- | |short_description=p@chr11:14328430..14328438,- | ||
}} | }} |
Latest revision as of 20:16, 23 July 2015
Short description: | p@chr11:14328430..14328438, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:14328430..14328438, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.74e-31 | 52 |
lymphocyte | 1.63e-30 | 53 |
common lymphoid progenitor | 1.63e-30 | 53 |
lymphocyte of B lineage | 4.31e-25 | 24 |
pro-B cell | 4.31e-25 | 24 |
B cell | 7.01e-20 | 14 |
nongranular leukocyte | 2.85e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 1.47e-13 | 120 |
natural killer cell | 1.15e-11 | 3 |
pro-NK cell | 1.15e-11 | 3 |
leukocyte | 1.26e-11 | 136 |
hematopoietic oligopotent progenitor cell | 2.26e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.26e-09 | 161 |
hematopoietic stem cell | 7.35e-09 | 168 |
hematopoietic cell | 2.91e-08 | 177 |
mature alpha-beta T cell | 3.80e-07 | 18 |
alpha-beta T cell | 3.80e-07 | 18 |
immature T cell | 3.80e-07 | 18 |
mature T cell | 3.80e-07 | 18 |
immature alpha-beta T cell | 3.80e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 5.75e-09 | 1 |
external female genitalia | 5.75e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 4.91e-09 | 1 |