FFCP PHASE1:Hg19::chr11:13340117..13340119,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:13340117..13340119,+ | |||
|description=CAGE_peak_at_chr11:13340117..13340119,+ | |||
|id=chr11:13340117..13340119,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.27e-14!140;CL:0000990!1.97e-10!8;CL:0000037!4.10e-10!172;CL:0000566!4.10e-10!172;CL:0000988!5.28e-10!182;CL:0002031!3.55e-09!124;CL:0002032!3.75e-09!165;CL:0000837!3.75e-09!165;CL:0002087!1.43e-08!119;CL:0000453!2.87e-08!5;CL:0000451!3.36e-08!10;CL:0000840!7.61e-07!5;CL:0001029!7.61e-07!5;CL:0000766!7.90e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000623;3.68e-23;3!CL:0000791;4.74e-15;18!CL:0000789;4.74e-15;18!CL:0002419;4.74e-15;18!CL:0000624;4.30e-12;6!CL:0000084;6.24e-11;25!CL:0000094;2.66e-09;8!CL:0000542;4.67e-09;53!CL:0000081;5.31e-07;11!CL:0000775;6.14e-07;3!CL:0000625;6.35e-07;11!CL:0000767;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,4.12e-23,3;CL:0000825,4.12e-23,3;CL:0000838,2.87e-15,52;CL:0000791,3.67e-15,18;CL:0000789,3.67e-15,18;CL:0002420,3.67e-15,18;CL:0002419,3.67e-15,18;CL:0000790,3.67e-15,18;CL:0000542,5.66e-15,53;CL:0000051,5.66e-15,53;CL:0000624,3.44e-12,6;CL:0000738,2.62e-11,136;CL:0000084,5.21e-11,25;CL:0000827,5.21e-11,25;CL:0002032,1.99e-09,161;CL:0000837,1.99e-09,161;CL:0000094,2.66e-09,8;CL:0000037,5.33e-09,168;CL:0002087,1.43e-08,115;CL:0000988,1.69e-08,177;CL:0002031,3.44e-08,120;CL:0000081,5.31e-07,11;CL:0000775,5.80e-07,3;CL:0000625,5.81e-07,11;CL:0000767,9.12e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;4.74e-15;18!CL:0000051;4.67e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.12e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.48e-14!115;UBERON:0001893!7.77e-10!34;UBERON:0002791!3.35e-09!33;UBERON:0002020!5.29e-09!34;UBERON:0003528!5.29e-09!34;UBERON:0002780!1.82e-08!41;UBERON:0001890!1.82e-08!41;UBERON:0006240!1.82e-08!41;UBERON:0001869!2.30e-08!32;UBERON:0003080!3.78e-08!42;UBERON:0001049!9.97e-08!57;UBERON:0005068!9.97e-08!57;UBERON:0006241!9.97e-08!57;UBERON:0007135!9.97e-08!57;UBERON:0002616!2.86e-07!59;UBERON:0000955!3.43e-07!69;UBERON:0006238!3.43e-07!69;UBERON:0002390!6.85e-07!102;UBERON:0003061!6.85e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.61130724598361,0,0.236132343941038,0.393364276848904,1.15148819429164,0.619264493264304,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0.651032612147555,0,0,0.515151135268373,0.726991193897824,0.755751887377619,0.485168122375632,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0.502497330513487,0,0,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,1.14681968437569,0,0,0,2.360517241366,1.96505381374582,0.822405995998037,0.167186495390678,0,0.473447805734733,0,0.222820913770347,0,0.443067789167242,0,0.384273959177026,0,0.328875809207352,0,0,0,0,1.04535523804977,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.80642697289893,1.33720097891754,1.44824403882799,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,0,0,0.649094787309367,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,1.2937654491571,2.18183161675572,0.254094624222463,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0,0,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0.208843899010911,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.219267951258557,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0,0.544813624446302,0,0,0,0.899895566206002,0.77380195455795,0.0607495566580247,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0,0.171086837884329,0,0.320362237703084,0,0.414239055347196,0.992332043623902,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0.332787154610557,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0.584580926518165,0.265729680626726,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.638535436228605,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0.135939465953663,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,1.9307228228694,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr11:13340117..13340119,+ | |||
}} |
Latest revision as of 20:08, 23 July 2015
Short description: | p@chr11:13340117..13340119, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:13340117..13340119, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 4.12e-23 | 3 |
pro-NK cell | 4.12e-23 | 3 |
lymphoid lineage restricted progenitor cell | 2.87e-15 | 52 |
mature alpha-beta T cell | 3.67e-15 | 18 |
alpha-beta T cell | 3.67e-15 | 18 |
immature T cell | 3.67e-15 | 18 |
mature T cell | 3.67e-15 | 18 |
immature alpha-beta T cell | 3.67e-15 | 18 |
lymphocyte | 5.66e-15 | 53 |
common lymphoid progenitor | 5.66e-15 | 53 |
CD4-positive, alpha-beta T cell | 3.44e-12 | 6 |
leukocyte | 2.62e-11 | 136 |
T cell | 5.21e-11 | 25 |
pro-T cell | 5.21e-11 | 25 |
hematopoietic oligopotent progenitor cell | 1.99e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-09 | 161 |
granulocyte | 2.66e-09 | 8 |
hematopoietic stem cell | 5.33e-09 | 168 |
nongranular leukocyte | 1.43e-08 | 115 |
hematopoietic cell | 1.69e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 3.44e-08 | 120 |
blood cell | 5.31e-07 | 11 |
neutrophil | 5.80e-07 | 3 |
CD8-positive, alpha-beta T cell | 5.81e-07 | 11 |
basophil | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.12e-09 | 2 |