FFCP PHASE1:Hg19::chr11:129993540..129993572,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:129993540..129993572,+ to FFCP PHASE1:Hg19::chr11:129993540..129993572,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:129993540..129993572,+ | |||
|coexpression_cluster_id=C880 | |||
|description=CAGE_peak_at_chr11:129993540..129993572,+ | |||
|id=chr11:129993540..129993572,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.72e-23!42;CL:0000860!9.47e-21!45;CL:0002194!1.08e-20!63;CL:0000576!1.08e-20!63;CL:0000040!1.08e-20!63;CL:0000559!1.08e-20!63;CL:0002009!7.29e-20!65;CL:0000766!7.58e-19!76;CL:0000839!1.41e-18!70;CL:0000557!3.75e-17!71;CL:0000763!2.86e-11!112;CL:0000049!2.86e-11!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.99e-39;33!CL:0002057;2.99e-39;33!CL:0000473;7.35e-35;39!CL:0000234;7.35e-35;39!CL:0000576;3.93e-23;48!CL:0000766;1.11e-15;69!CL:0000763;4.38e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.83e-44,48;CL:0000234,9.83e-44,48;CL:0000860,8.31e-41,42;CL:0002057,8.31e-41,42;CL:0002194,2.73e-37,59;CL:0000576,2.73e-37,59;CL:0000040,2.73e-37,59;CL:0000559,2.73e-37,59;CL:0002009,1.38e-35,61;CL:0000839,8.67e-32,66;CL:0000766,1.34e-31,72;CL:0000557,4.25e-31,67;CL:0000763,2.71e-20,108;CL:0000049,2.71e-20,108;CL:0002087,4.29e-14,115;CL:0002031,4.21e-12,120;CL:0000738,1.51e-11,136;CL:0002032,1.78e-09,161;CL:0000837,1.78e-09,161;CL:0000037,3.74e-09,168;CL:0000988,1.65e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.26e-29;42!CL:0000049;2.07e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.81e-13!112;UBERON:0002371!1.81e-12!80;UBERON:0002390!7.30e-12!102;UBERON:0003061!7.30e-12!102;UBERON:0001474!3.02e-10!86;UBERON:0002405!6.20e-09!115;UBERON:0004765!6.50e-09!101;UBERON:0001434!6.50e-09!101;UBERON:0000468!6.50e-08!659;UBERON:0000467!1.08e-07!625;UBERON:0000480!1.65e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.02e-25,76;UBERON:0002390,5.50e-25,98;UBERON:0003061,5.50e-25,98;UBERON:0002193,1.19e-24,108;UBERON:0001474,8.37e-23,82;UBERON:0002405,6.31e-22,93;UBERON:0004765,9.52e-22,90;UBERON:0001434,2.75e-19,100;UBERON:0003081,1.94e-13,203;UBERON:0002204,2.60e-08,167;UBERON:0000926,5.05e-08,315;UBERON:0004120,5.05e-08,315;UBERON:0006603,5.05e-08,315 | |||
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|phase1_expression=0.363356758541113,1.71280419112787,0.140954404095971,1.0007329835313,0,0,0,0,1.30592814099919,0,0.697801167972428,0.218441372130172,0.263766978228454,0.37129905888014,0,0,0.602694528023977,0,0,0.123121058076788,0.612002073732759,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0.0821005894499457,0,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0.739508020333575,0.0774672005803016,0.142169232487422,0.293600439334847,0.553995408531877,2.00544447470142,1.30206522429511,1.11957737119962,0.32389366601898,0.77272670290256,3.78035420826868,2.64513160582167,1.94067248950253,3.71886459049095,2.05583944010913,4.33588919253145,2.8769239232215,2.30544635876191,2.12834006899727,3.10271112662957,1.29096936716765,2.70852973188684,6.77672422353377,2.72906150057846,2.02251136000576,6.42776173978895,0.641858054152187,5.75403413219137,3.62836430205388,2.39356389145958,2.55734850319616,12.1887880224005,6.24123747160254,3.73693349397345,5.52747063564835,5.21482918420201,2.82345498116652,7.26479403160043,3.68277635987565,4.43047342417238,1.47878700418359,1.4882300997553,0.209658645508376,1.34794357375794,2.25265339262259,1.76798145366788,0.285012743741249,0.99458338599545,0.91332076882317,0,0,0,0.426730222566507,0,0.574752439954483,0,0,1.1384259382189,0,0.382273228125229,1.32171328579026,0.560508562981536,0.526768169550154,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0.255725123687061,0.722878304769133,1.00267582127178,1.15877215168659,0,0,0.567208902984407,0,0.175669571386252,0.785874452986276,0,0.741568885568859,0,1.21890816109487,1.59549552622638,0,0,0,0,0,1.04142150482278,0,0,1.10047216776027,0.417989933073621,0.258416759169329,0.71153252537342,0.33472061276467,0.805658634218294,0.760272105718513,0.976248230192678,1.10298924103761,2.43042584364528,0.357198913136319,0,0.112611480483322,0,0.949265659568129,0.366403487860815,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.662045904066094,2.29469296599051,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0.302714855289863,0,0.234321431833797,0,0,0.298897361103602,0.587172493218824,0.161872944368132,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0.340296549480063,0.538168907066586,0.427114777637135,0.423863802319124,0,0.206105058476878,0,0,0.337552664482532,0.194874010322397,0,0.184099797284599,0.323292113637624,0,0,0,0.966304265816484,0.545492241181669,0.573609190778008,0.731842236777572,0.397589304964456,0.348581828608555,0.518305275076852,0.252320850875628,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.236613600079688,0,0,0.55146986366197,0.217879444092406,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,3.80265104465493,0.982827216677626,0,0,0.860919069801795,0.514703430895577,0.439001141634502,0,0.603173834469785,1.20364978706088,0,0,1.44331342025273,0.115930404975077,0.117408694235822,1.58803092537181,2.77791307545966,1.14152491340759,0,0,0.738651018262192,0.234004265139238,1.48631162288728,0,1.00789276919316,1.70130116690864,0.53735113621709,1.45316969256981,1.53353071666084,0.492663237895943,0,0.207328115540772,0.288239906833923,0,0.253991577168676,0,0,0,0.616964956219941,0,0.857479297891735,0.112131084345361,0,0.22001485746285,0,0,0,0.531876233169741,2.08014873822732,0,0,0,0,0,0,0,0,0,1.80863626235752,0,1.49959486773086,3.64871341923571,3.01354254859276,8.43335757932127,0.239624855491583,1.14861935834114,0,0.434343920002738,0.61642896765115,0.716243852959582,0.112085143993527,0.394061520403854,0,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0,3.74503511973591,8.97484377612075,0.828831026872071,0.12269149171914,0.500170521059677,0.271265023699736,0,0.892144943985809,0,0.234282829985426,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0.206768026122887,2.37285620900479,0.640365346820666,0,1.66435439510497,0,0.248107807818777,0,0.561320188866147,0.256278298511402,1.53512174720011,0,0,0.308419387605311,0,0.0821271560138091,0,0.464841513839837,0.966875596732978,2.20557117333613,1.47329582297434,0,0.546273504020151,0.262248829918848,0,0.924184045252977,0,0,0.73886140225013,1.13733384070897,1.02056223165909,0.215915916102139,1.54227252690289,0,0,1.27438136522519,0,0.223874754722178,0.657779629937804,0.261435451024901,0.512900250232778,1.31205858279882,0.650756789328606,0.206082023295445,0,0,0,1.30012049207304,0,0.193341436584244,0,0.307007349452259,0.275673144969061,0.214840489736547,0.290033387828457,0.340906509664404,0,1.4875642382488,1.34533047155574,0.510450849978337,0.809262246844399,0,1.25924938732256,0,0,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0,0,0.42793898803392,0,0,0,0,0.353437207037059,0.202182481573316,0,0.421258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| ||
|short_description=p@chr11:129993540..129993572,+ | |||
}} | }} |
Latest revision as of 19:59, 23 July 2015
Short description: | p@chr11:129993540..129993572, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:129993540..129993572, + |
Coexpression cluster: | C880_CD14_Monocytederived_pineal_Neutrophils_leiomyoma_Hepatocyte_papillary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.83e-44 | 48 |
phagocyte | 9.83e-44 | 48 |
classical monocyte | 8.31e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.31e-41 | 42 |
monopoietic cell | 2.73e-37 | 59 |
monocyte | 2.73e-37 | 59 |
monoblast | 2.73e-37 | 59 |
promonocyte | 2.73e-37 | 59 |
macrophage dendritic cell progenitor | 1.38e-35 | 61 |
myeloid lineage restricted progenitor cell | 8.67e-32 | 66 |
myeloid leukocyte | 1.34e-31 | 72 |
granulocyte monocyte progenitor cell | 4.25e-31 | 67 |
myeloid cell | 2.71e-20 | 108 |
common myeloid progenitor | 2.71e-20 | 108 |
nongranular leukocyte | 4.29e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 4.21e-12 | 120 |
leukocyte | 1.51e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.78e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.78e-09 | 161 |
hematopoietic stem cell | 3.74e-09 | 168 |
hematopoietic cell | 1.65e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.02e-25 | 76 |
hematopoietic system | 5.50e-25 | 98 |
blood island | 5.50e-25 | 98 |
hemolymphoid system | 1.19e-24 | 108 |
bone element | 8.37e-23 | 82 |
immune system | 6.31e-22 | 93 |
skeletal element | 9.52e-22 | 90 |
skeletal system | 2.75e-19 | 100 |
lateral plate mesoderm | 1.94e-13 | 203 |
musculoskeletal system | 2.60e-08 | 167 |
mesoderm | 5.05e-08 | 315 |
mesoderm-derived structure | 5.05e-08 | 315 |
presumptive mesoderm | 5.05e-08 | 315 |