FFCP PHASE1:Hg19::chr11:129992273..129992316,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:129992273..129992316,+ | |||
|coexpression_cluster_id=C880 | |coexpression_cluster_id=C880 | ||
|description=CAGE_peak_at_chr11:129992273..129992316,+ | |description=CAGE_peak_at_chr11:129992273..129992316,+ | ||
|id=chr11:129992273..129992316,+ | |id=chr11:129992273..129992316,+ | ||
|ontology_enrichment_celltype=CL:0000860;9.32e-20;33!CL:0002057;9.32e-20;33!CL:0000473;7.31e-19;39!CL:0000234;7.31e-19;39!CL:0000576;2.74e-12;48!CL:0000766;6.24e-09;69 | |ontology_enrichment_celltype=CL:0002057!2.97e-20!42;CL:0000860!5.42e-18!45;CL:0002194!2.14e-17!63;CL:0000576!2.14e-17!63;CL:0000040!2.14e-17!63;CL:0000559!2.14e-17!63;CL:0002009!7.64e-16!65;CL:0000766!1.12e-14!76;CL:0000839!3.02e-12!70;CL:0000557!1.47e-11!71;CL:0000063!3.80e-08!578 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;9.32e-20;33!CL:0002057;9.32e-20;33!CL:0000473;7.31e-19;39!CL:0000234;7.31e-19;39!CL:0000576;2.74e-12;48!CL:0000766;6.24e-09;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.29e-24,48;CL:0000234,1.29e-24,48;CL:0000860,1.08e-21,42;CL:0002057,1.08e-21,42;CL:0002194,6.92e-21,59;CL:0000576,6.92e-21,59;CL:0000040,6.92e-21,59;CL:0000559,6.92e-21,59;CL:0002009,3.14e-19,61;CL:0000766,5.69e-18,72;CL:0000839,1.26e-15,66;CL:0000557,5.48e-15,67 | |||
|ontology_enrichment_development_v019=CL:0002057;6.31e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.43e-11!659;UBERON:0000467!7.23e-11!625;UBERON:0000480!1.10e-10!626;UBERON:0002371!1.08e-09!80;UBERON:0004765!1.33e-09!101;UBERON:0001434!1.33e-09!101;UBERON:0000062!2.68e-08!511;UBERON:0001474!9.04e-08!86;UBERON:0000926!1.66e-07!448;UBERON:0004120!1.66e-07!448;UBERON:0006603!1.66e-07!448;UBERON:0000922!3.02e-07!612;UBERON:0002050!3.52e-07!605;UBERON:0005423!3.52e-07!605;UBERON:0000923!4.55e-07!604;UBERON:0005291!4.55e-07!604;UBERON:0006598!4.55e-07!604;UBERON:0002532!4.55e-07!604;UBERON:0002405!6.51e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,2.36e-13,100;UBERON:0002371,3.82e-13,76;UBERON:0004765,2.87e-12,90;UBERON:0001474,7.33e-11,82;UBERON:0002405,1.04e-10,93;UBERON:0000926,1.15e-08,315;UBERON:0004120,1.15e-08,315;UBERON:0006603,1.15e-08,315;UBERON:0002193,1.17e-08,108;UBERON:0003081,5.00e-08,203;UBERON:0002390,8.01e-08,98;UBERON:0003061,8.01e-08,98;UBERON:0002204,9.12e-08,167 | |||
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| ||
|short_description=p@chr11:129992273..129992316,+ | |short_description=p@chr11:129992273..129992316,+ | ||
}} | }} |
Latest revision as of 19:59, 23 July 2015
Short description: | p@chr11:129992273..129992316, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:129992273..129992316, + |
Coexpression cluster: | C880_CD14_Monocytederived_pineal_Neutrophils_leiomyoma_Hepatocyte_papillary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.29e-24 | 48 |
phagocyte | 1.29e-24 | 48 |
classical monocyte | 1.08e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.08e-21 | 42 |
monopoietic cell | 6.92e-21 | 59 |
monocyte | 6.92e-21 | 59 |
monoblast | 6.92e-21 | 59 |
promonocyte | 6.92e-21 | 59 |
macrophage dendritic cell progenitor | 3.14e-19 | 61 |
myeloid leukocyte | 5.69e-18 | 72 |
myeloid lineage restricted progenitor cell | 1.26e-15 | 66 |
granulocyte monocyte progenitor cell | 5.48e-15 | 67 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 2.36e-13 | 100 |
bone marrow | 3.82e-13 | 76 |
skeletal element | 2.87e-12 | 90 |
bone element | 7.33e-11 | 82 |
immune system | 1.04e-10 | 93 |
mesoderm | 1.15e-08 | 315 |
mesoderm-derived structure | 1.15e-08 | 315 |
presumptive mesoderm | 1.15e-08 | 315 |
hemolymphoid system | 1.17e-08 | 108 |
lateral plate mesoderm | 5.00e-08 | 203 |
hematopoietic system | 8.01e-08 | 98 |
blood island | 8.01e-08 | 98 |
musculoskeletal system | 9.12e-08 | 167 |