FFCP PHASE1:Hg19::chr11:129990642..129990649,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:129990642..129990649,+
|short_description=p@chr11:129990642..129990649,+
|description=CAGE_peak_at_chr11:129990642..129990649,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:129990642..129990649,+ | |||
|coexpression_cluster_id=C880 | |||
|description=CAGE_peak_at_chr11:129990642..129990649,+ | |||
|id=chr11:129990642..129990649,+ | |||
|ontology_enrichment_celltype=CL:0002194!3.54e-12!63;CL:0000576!3.54e-12!63;CL:0000040!3.54e-12!63;CL:0000559!3.54e-12!63;CL:0002009!1.14e-11!65;CL:0000766!9.34e-11!76;CL:0002057!1.25e-10!42;CL:0000860!1.38e-09!45;CL:0000557!2.80e-09!71;CL:0000839!3.04e-09!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.01e-37;33!CL:0002057;1.01e-37;33!CL:0000473;1.24e-35;39!CL:0000234;1.24e-35;39!CL:0000576;2.57e-18;48!CL:0000766;5.53e-12;69!CL:0000763;6.75e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.54e-35,48;CL:0000234,1.54e-35,48;CL:0000860,1.73e-31,42;CL:0002057,1.73e-31,42;CL:0002194,3.93e-27,59;CL:0000576,3.93e-27,59;CL:0000040,3.93e-27,59;CL:0000559,3.93e-27,59;CL:0002009,4.75e-26,61;CL:0000766,1.99e-25,72;CL:0000839,1.26e-23,66;CL:0000557,3.47e-23,67;CL:0000763,8.63e-15,108;CL:0000049,8.63e-15,108;CL:0002087,4.72e-11,115;CL:0000738,1.90e-10,136;CL:0002031,2.35e-10,120;CL:0002032,6.88e-08,161;CL:0000837,6.88e-08,161;CL:0000037,2.57e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;3.75e-24;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.84e-11;3!DOID:127;2.84e-11;3!DOID:0060072;1.50e-08;4!DOID:4468;1.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.44e-11,3;DOID:127,1.44e-11,3;DOID:0060072,9.06e-09,4;DOID:4468,1.95e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!4.78e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.55e-08;2!UBERON:0002757;5.55e-08;2!UBERON:0010134;5.55e-08;2!UBERON:0005408;5.55e-08;2!UBERON:0001899;5.55e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.79e-20,76;UBERON:0001474,1.61e-19,82;UBERON:0004765,9.04e-19,90;UBERON:0002405,1.75e-16,93;UBERON:0001434,3.00e-16,100;UBERON:0002390,5.63e-14,98;UBERON:0003061,5.63e-14,98;UBERON:0002193,2.43e-13,108;UBERON:0002204,1.19e-09,167;UBERON:0001905,1.11e-07,2;UBERON:0002757,1.11e-07,2;UBERON:0010134,1.11e-07,2;UBERON:0005408,1.11e-07,2;UBERON:0001899,1.11e-07,2 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.704772020479856,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0.218441372130172,0.527533956456907,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0.0821005894499457,0.0787107813136792,0.393364276848904,0.383829398097213,0.154816123316076,0,0.30120591877825,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0,0.223915474239924,0.647787332037959,0.257575567634187,2.61716829803216,1.51150377475524,1.4555043671269,1.62700325833979,1.23350366406548,1.54853185447552,1.7261543539329,1.5369642391746,0.47296445977717,0.689491361473237,1.93645405075148,0,4.1413314699373,1.91034305040492,0,2.44867113896722,0.962787081228281,2.55734850319616,1.9791078011203,1.59570926097305,1.27867425159808,6.67481248845743,3.97169657283798,0,3.26623264833766,3.12889751052121,0,2.42159801053347,0.736555271975129,0.632924774881769,0,0.212604299965044,0,0.786300418025466,0.901061357049038,0.964353520182481,0.570025487482497,0,0,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0.43917392846563,0.130979075497713,0,0,0.324547393654683,0.348259474598534,0.26591592103773,0.238490624305342,0,0,0.39752481473341,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0.516833518338658,1.06729878806013,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0,0.337834441449967,0,0,0.549605231791222,0,0,0.872188104285069,0.993943903390637,0.25326102332916,0.264818361626438,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0.408308342509787,0.122834317311768,0.309977343527296,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0,0.150238058906597,0.226864366320042,0.358779271377724,0.213557388818567,0.211931901159562,0.600182192168805,0.206105058476878,0,0.37223371266318,0.168776332241266,0.194874010322397,0,0.368199594569197,0.484938170456436,0.710019185033229,0.201504196455281,0.339121184620975,0.57978255948989,0.545492241181669,0,0.121973706129595,0.265059536642971,0,0.518305275076852,0,0.36497735907583,0,0,0,0.464367928031979,0,0.236613600079688,0,0.482022059766964,0.220587945464788,0.217879444092406,0.237270619111097,0.539325232640658,0.196221465125346,0.769494313892781,0,0,0,0,1.26755034821831,1.96565443335525,0,0,0.245976877086227,0,0.329250856225877,0,0.301586917234893,0.277765335475589,0.325808305310325,0,0,0.231860809950154,0.469634776943287,0.433099343283221,0.462985512576611,0.761016608938393,0,0,0.492434012174795,0.468008530278475,1.0404181360211,0,0.16798212819886,0,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,0.600686115687835,0,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,1.3996218765488,1.2162378064119,0,2.10833939483032,0.479249710983165,0,0,0.723906533337896,0.61642896765115,0,0.112085143993527,0.197030760201927,0.215627574859517,0,0,0,0.773288812777695,0,0,1.49801404789436,2.99161459204025,0.414415513436035,0.36807447515742,1.00034104211935,0,0.415941723061614,0.535286966391485,0.315404830067869,0.468565659970853,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0.496215615637554,0.460385919864187,0.280660094433074,0.768834895534206,2.55853624533352,0.482561763430822,0,0,0.177561725313127,0.246381468041427,1.03850885836724,0.232420756919918,0.362578348774867,0.601519410909855,1.28913384510255,0.114814448164607,0,0.393373244878272,0,0.15403067420883,0,0,0.105551628892876,0,0.340187410553031,0.431831832204279,0,0.541892875087706,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0.325378394664303,0.309123034943167,0,0,0,0,0,0,0,0,0,0.107420244868274,0.290033387828457,0.170453254832202,0,1.15699440752685,0,0.765676274967505,0.30347334256665,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0.487426979262569,1.05650146756755,0,0.424216295861138,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0.35667105148125,0.354761064070598,0.844430541190656,0.329294892959902,0,0,0.288666338176536,0,0,0.376575203107117,0.43050537267123,0,0,0.918893600827838,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,1.22520107990516,0.185803175125719,0,0.142283686696828,0,0,0,0.211673582723883,0.324621940274555,0,0,0.47003968731907,0,0.169291777801603,0.321176150207399,0.201799707191048,0,0.343505344755765,0,0.447352215784832,0.667396566847634,0,0,0,0.27045567847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| ||
|short_description=p@chr11:129990642..129990649,+ | |||
}} | }} |
Latest revision as of 19:58, 23 July 2015
Short description: | p@chr11:129990642..129990649, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:129990642..129990649, + |
Coexpression cluster: | C880_CD14_Monocytederived_pineal_Neutrophils_leiomyoma_Hepatocyte_papillary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.54e-35 | 48 |
phagocyte | 1.54e-35 | 48 |
classical monocyte | 1.73e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.73e-31 | 42 |
monopoietic cell | 3.93e-27 | 59 |
monocyte | 3.93e-27 | 59 |
monoblast | 3.93e-27 | 59 |
promonocyte | 3.93e-27 | 59 |
macrophage dendritic cell progenitor | 4.75e-26 | 61 |
myeloid leukocyte | 1.99e-25 | 72 |
myeloid lineage restricted progenitor cell | 1.26e-23 | 66 |
granulocyte monocyte progenitor cell | 3.47e-23 | 67 |
myeloid cell | 8.63e-15 | 108 |
common myeloid progenitor | 8.63e-15 | 108 |
nongranular leukocyte | 4.72e-11 | 115 |
leukocyte | 1.90e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 2.35e-10 | 120 |
hematopoietic oligopotent progenitor cell | 6.88e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.88e-08 | 161 |
hematopoietic stem cell | 2.57e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.79e-20 | 76 |
bone element | 1.61e-19 | 82 |
skeletal element | 9.04e-19 | 90 |
immune system | 1.75e-16 | 93 |
skeletal system | 3.00e-16 | 100 |
hematopoietic system | 5.63e-14 | 98 |
blood island | 5.63e-14 | 98 |
hemolymphoid system | 2.43e-13 | 108 |
musculoskeletal system | 1.19e-09 | 167 |
pineal body | 1.11e-07 | 2 |
regional part of epithalamus | 1.11e-07 | 2 |
secretory circumventricular organ | 1.11e-07 | 2 |
circumventricular organ | 1.11e-07 | 2 |
epithalamus | 1.11e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.44e-11 | 3 |
leiomyoma | 1.44e-11 | 3 |
benign neoplasm | 9.06e-09 | 4 |
clear cell adenocarcinoma | 1.95e-07 | 2 |