FFCP PHASE1:Hg19::chr11:129990599..129990618,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:129990599..129990618,+ | |||
|coexpression_cluster_id=C880 | |coexpression_cluster_id=C880 | ||
|description=CAGE_peak_at_chr11:129990599..129990618,+ | |description=CAGE_peak_at_chr11:129990599..129990618,+ | ||
|id=chr11:129990599..129990618,+ | |id=chr11:129990599..129990618,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.33e-13!42;CL:0000860!1.68e-11!45;CL:0002194!1.21e-10!63;CL:0000576!1.21e-10!63;CL:0000040!1.21e-10!63;CL:0000559!1.21e-10!63;CL:0002009!1.97e-10!65;CL:0000839!7.16e-08!70;CL:0000557!7.54e-08!71;CL:0000766!1.95e-07!76 | |ontology_enrichment_celltype=CL:0002057!6.33e-13!42;CL:0000860!1.68e-11!45;CL:0002194!1.21e-10!63;CL:0000576!1.21e-10!63;CL:0000040!1.21e-10!63;CL:0000559!1.21e-10!63;CL:0002009!1.97e-10!65;CL:0000839!7.16e-08!70;CL:0000557!7.54e-08!71;CL:0000766!1.95e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.65e-19;33!CL:0002057;7.65e-19;33!CL:0000473;2.41e-18;39!CL:0000234;2.41e-18;39!CL:0000576;2.13e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.68e-20,48;CL:0000234,3.68e-20,48;CL:0000860,2.56e-17,42;CL:0002057,2.56e-17,42;CL:0002194,1.97e-15,59;CL:0000576,1.97e-15,59;CL:0000040,1.97e-15,59;CL:0000559,1.97e-15,59;CL:0002009,1.94e-14,61;CL:0000839,2.97e-12,66;CL:0000766,6.48e-12,72;CL:0000557,7.33e-12,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.15e-13;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!1.40e-11!511;UBERON:0000467!1.97e-11!625;UBERON:0000480!3.69e-11!626;UBERON:0000468!1.19e-10!659;UBERON:0000922!3.18e-07!612;UBERON:0002050!7.19e-07!605;UBERON:0005423!7.19e-07!605;UBERON:0000923!1.00e-06!604;UBERON:0005291!1.00e-06!604;UBERON:0006598!1.00e-06!604;UBERON:0002532!1.00e-06!604 | |ontology_enrichment_uberon=UBERON:0000062!1.40e-11!511;UBERON:0000467!1.97e-11!625;UBERON:0000480!3.69e-11!626;UBERON:0000468!1.19e-10!659;UBERON:0000922!3.18e-07!612;UBERON:0002050!7.19e-07!605;UBERON:0005423!7.19e-07!605;UBERON:0000923!1.00e-06!604;UBERON:0005291!1.00e-06!604;UBERON:0006598!1.00e-06!604;UBERON:0002532!1.00e-06!604 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.77e-10,76;UBERON:0001474,2.13e-09,82;UBERON:0004765,5.95e-08,90;UBERON:0002405,1.84e-07,93;UBERON:0001434,4.03e-07,100 | |||
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| ||
|short_description=p@chr11:129990599..129990618,+ | |short_description=p@chr11:129990599..129990618,+ | ||
}} | }} |
Latest revision as of 19:58, 23 July 2015
Short description: | p@chr11:129990599..129990618, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:129990599..129990618, + |
Coexpression cluster: | C880_CD14_Monocytederived_pineal_Neutrophils_leiomyoma_Hepatocyte_papillary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.68e-20 | 48 |
phagocyte | 3.68e-20 | 48 |
classical monocyte | 2.56e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.56e-17 | 42 |
monopoietic cell | 1.97e-15 | 59 |
monocyte | 1.97e-15 | 59 |
monoblast | 1.97e-15 | 59 |
promonocyte | 1.97e-15 | 59 |
macrophage dendritic cell progenitor | 1.94e-14 | 61 |
myeloid lineage restricted progenitor cell | 2.97e-12 | 66 |
myeloid leukocyte | 6.48e-12 | 72 |
granulocyte monocyte progenitor cell | 7.33e-12 | 67 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.77e-10 | 76 |
bone element | 2.13e-09 | 82 |
skeletal element | 5.95e-08 | 90 |
immune system | 1.84e-07 | 93 |
skeletal system | 4.03e-07 | 100 |