FFCP PHASE1:Hg19::chr11:129980501..129980536,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:129980501..129980536,+ | |||
|coexpression_cluster_id=C880 | |coexpression_cluster_id=C880 | ||
|description=CAGE_peak_at_chr11:129980501..129980536,+ | |description=CAGE_peak_at_chr11:129980501..129980536,+ | ||
|id=chr11:129980501..129980536,+ | |id=chr11:129980501..129980536,+ | ||
|ontology_enrichment_celltype=CL:0000860;3.39e-18;33!CL:0002057;3.39e-18;33!CL:0000473;1.52e-17;39!CL:0000234;1.52e-17;39!CL:0000576;9.01e-10;48!CL:0000766;6.86e-07;69 | |ontology_enrichment_celltype=CL:0002057!2.29e-14!42;CL:0002194!2.59e-13!63;CL:0000576!2.59e-13!63;CL:0000040!2.59e-13!63;CL:0000559!2.59e-13!63;CL:0000860!9.50e-13!45;CL:0002009!1.81e-12!65;CL:0000766!2.88e-09!76;CL:0000839!3.41e-09!70;CL:0000557!9.88e-09!71;CL:0000223!6.26e-07!59;CL:0000066!7.99e-07!254 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;3.39e-18;33!CL:0002057;3.39e-18;33!CL:0000473;1.52e-17;39!CL:0000234;1.52e-17;39!CL:0000576;9.01e-10;48!CL:0000766;6.86e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.38e-18,48;CL:0000234,2.38e-18,48;CL:0002194,7.59e-16,59;CL:0000576,7.59e-16,59;CL:0000040,7.59e-16,59;CL:0000559,7.59e-16,59;CL:0000860,9.60e-16,42;CL:0002057,9.60e-16,42;CL:0002009,1.69e-14,61;CL:0000766,7.08e-12,72;CL:0000839,1.38e-11,66;CL:0000557,4.51e-11,67;CL:0000223,5.43e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002057;2.82e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.01e-12!659;UBERON:0000467!5.57e-12!625;UBERON:0000480!9.08e-12!626;UBERON:0000062!3.76e-10!511;UBERON:0000922!2.15e-09!612;UBERON:0002050!8.75e-09!605;UBERON:0005423!8.75e-09!605;UBERON:0000923!1.05e-08!604;UBERON:0005291!1.05e-08!604;UBERON:0006598!1.05e-08!604;UBERON:0002532!1.05e-08!604;UBERON:0002371!1.40e-07!80;UBERON:0002405!8.74e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.63e-10,76;UBERON:0001474,3.87e-08,82;UBERON:0002405,9.78e-08,93;UBERON:0004765,3.77e-07,90;UBERON:0000922,6.76e-07,592;UBERON:0001434,7.21e-07,100;UBERON:0002050,7.33e-07,564;UBERON:0005423,9.53e-07,581;UBERON:0000923,9.86e-07,560;UBERON:0010316,9.86e-07,560;UBERON:0005291,9.86e-07,560;UBERON:0006598,9.86e-07,560;UBERON:0010317,9.86e-07,560;UBERON:0002532,9.86e-07,560 | |||
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| ||
|short_description=p@chr11:129980501..129980536,+ | |short_description=p@chr11:129980501..129980536,+ | ||
}} | }} |
Latest revision as of 19:58, 23 July 2015
Short description: | p@chr11:129980501..129980536, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:129980501..129980536, + |
Coexpression cluster: | C880_CD14_Monocytederived_pineal_Neutrophils_leiomyoma_Hepatocyte_papillary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.38e-18 | 48 |
phagocyte | 2.38e-18 | 48 |
monopoietic cell | 7.59e-16 | 59 |
monocyte | 7.59e-16 | 59 |
monoblast | 7.59e-16 | 59 |
promonocyte | 7.59e-16 | 59 |
classical monocyte | 9.60e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.60e-16 | 42 |
macrophage dendritic cell progenitor | 1.69e-14 | 61 |
myeloid leukocyte | 7.08e-12 | 72 |
myeloid lineage restricted progenitor cell | 1.38e-11 | 66 |
granulocyte monocyte progenitor cell | 4.51e-11 | 67 |
endodermal cell | 5.43e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.63e-10 | 76 |
bone element | 3.87e-08 | 82 |
immune system | 9.78e-08 | 93 |
skeletal element | 3.77e-07 | 90 |
embryo | 6.76e-07 | 592 |
skeletal system | 7.21e-07 | 100 |
embryonic structure | 7.33e-07 | 564 |
developing anatomical structure | 9.53e-07 | 581 |
germ layer | 9.86e-07 | 560 |
germ layer / neural crest | 9.86e-07 | 560 |
embryonic tissue | 9.86e-07 | 560 |
presumptive structure | 9.86e-07 | 560 |
germ layer / neural crest derived structure | 9.86e-07 | 560 |
epiblast (generic) | 9.86e-07 | 560 |