FFCP PHASE1:Hg19::chr11:129980465..129980488,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:129980465..129980488,+ | |||
|coexpression_cluster_id=C880 | |||
|description=CAGE_peak_at_chr11:129980465..129980488,+ | |description=CAGE_peak_at_chr11:129980465..129980488,+ | ||
|id=chr11:129980465..129980488,+ | |id=chr11:129980465..129980488,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.93e-12!42;CL:0002194!1.56e-11!63;CL:0000576!1.56e-11!63;CL:0000040!1.56e-11!63;CL:0000559!1.56e-11!63;CL:0000860!8.40e-11!45;CL:0002009!9.72e-11!65;CL:0000839!3.83e-08!70;CL:0000766!6.86e-08!76;CL:0000557!2.61e-07!71;CL:0000066!7.29e-07!254 | |ontology_enrichment_celltype=CL:0002057!8.93e-12!42;CL:0002194!1.56e-11!63;CL:0000576!1.56e-11!63;CL:0000040!1.56e-11!63;CL:0000559!1.56e-11!63;CL:0000860!8.40e-11!45;CL:0002009!9.72e-11!65;CL:0000839!3.83e-08!70;CL:0000766!6.86e-08!76;CL:0000557!2.61e-07!71;CL:0000066!7.29e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.09e-12;39!CL:0000234;1.09e-12;39!CL:0000860;3.06e-12;33!CL:0002057;3.06e-12;33!CL:0000576;5.00e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.97e-14,48;CL:0000234,1.97e-14,48;CL:0002194,2.53e-12,59;CL:0000576,2.53e-12,59;CL:0000040,2.53e-12,59;CL:0000559,2.53e-12,59;CL:0000860,6.00e-12,42;CL:0002057,6.00e-12,42;CL:0002009,2.45e-11,61;CL:0000839,6.47e-09,66;CL:0000766,1.05e-08,72;CL:0000557,5.18e-08,67;CL:0000066,6.87e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.75e-13!659;UBERON:0000467!4.97e-12!625;UBERON:0000480!8.63e-12!626;UBERON:0000922!7.93e-11!612;UBERON:0002050!9.52e-10!605;UBERON:0005423!9.52e-10!605;UBERON:0000923!1.44e-09!604;UBERON:0005291!1.44e-09!604;UBERON:0006598!1.44e-09!604;UBERON:0002532!1.44e-09!604;UBERON:0000062!3.34e-09!511 | |ontology_enrichment_uberon=UBERON:0000468!4.75e-13!659;UBERON:0000467!4.97e-12!625;UBERON:0000480!8.63e-12!626;UBERON:0000922!7.93e-11!612;UBERON:0002050!9.52e-10!605;UBERON:0005423!9.52e-10!605;UBERON:0000923!1.44e-09!604;UBERON:0005291!1.44e-09!604;UBERON:0006598!1.44e-09!604;UBERON:0002532!1.44e-09!604;UBERON:0000062!3.34e-09!511 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,4.16e-09,592;UBERON:0002050,1.74e-08,564;UBERON:0000923,2.76e-08,560;UBERON:0010316,2.76e-08,560;UBERON:0005291,2.76e-08,560;UBERON:0006598,2.76e-08,560;UBERON:0010317,2.76e-08,560;UBERON:0002532,2.76e-08,560;UBERON:0005423,3.47e-08,581 | |||
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| ||
|short_description=p@chr11:129980465..129980488,+ | |short_description=p@chr11:129980465..129980488,+ | ||
}} | }} |
Latest revision as of 19:58, 23 July 2015
Short description: | p@chr11:129980465..129980488, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:129980465..129980488, + |
Coexpression cluster: | C880_CD14_Monocytederived_pineal_Neutrophils_leiomyoma_Hepatocyte_papillary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.97e-14 | 48 |
phagocyte | 1.97e-14 | 48 |
monopoietic cell | 2.53e-12 | 59 |
monocyte | 2.53e-12 | 59 |
monoblast | 2.53e-12 | 59 |
promonocyte | 2.53e-12 | 59 |
classical monocyte | 6.00e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.00e-12 | 42 |
macrophage dendritic cell progenitor | 2.45e-11 | 61 |
myeloid lineage restricted progenitor cell | 6.47e-09 | 66 |
myeloid leukocyte | 1.05e-08 | 72 |
granulocyte monocyte progenitor cell | 5.18e-08 | 67 |
epithelial cell | 6.87e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
embryo | 4.16e-09 | 592 |
embryonic structure | 1.74e-08 | 564 |
germ layer | 2.76e-08 | 560 |
germ layer / neural crest | 2.76e-08 | 560 |
embryonic tissue | 2.76e-08 | 560 |
presumptive structure | 2.76e-08 | 560 |
germ layer / neural crest derived structure | 2.76e-08 | 560 |
epiblast (generic) | 2.76e-08 | 560 |
developing anatomical structure | 3.47e-08 | 581 |