FFCP PHASE1:Hg19::chr11:126898086..126898090,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:126898086..126898090,- | |||
|coexpression_cluster_id=C145 | |coexpression_cluster_id=C145 | ||
|description=CAGE_peak_at_chr11:126898086..126898090,- | |description=CAGE_peak_at_chr11:126898086..126898090,- | ||
|id=chr11:126898086..126898090,- | |id=chr11:126898086..126898090,- | ||
|ontology_enrichment_celltype=CL:1001319!2.67e-09!1;CL:1000600!2.67e-09!1 | |ontology_enrichment_celltype=CL:1001319!2.67e-09!1;CL:1000600!2.67e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0000333;2.51e-53;5!CL:0000047;5.96e-34;2!CL:0002321;1.08e-18;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,8.52e-11,59;CL:0000047,1.35e-09,8;CL:0000221,4.40e-09,72;CL:0000333,2.95e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000133;2.92e-07;59 | |||
|ontology_enrichment_disease=DOID:3112!5.31e-10!1;DOID:3095!1.28e-09!22;DOID:2994!1.28e-09!22;DOID:2355!2.26e-09!1;DOID:0050687!5.39e-09!143;DOID:171!2.28e-08!10;DOID:162!3.51e-07!235;DOID:14566!5.72e-07!239;DOID:169!9.74e-07!6 | |ontology_enrichment_disease=DOID:3112!5.31e-10!1;DOID:3095!1.28e-09!22;DOID:2994!1.28e-09!22;DOID:2355!2.26e-09!1;DOID:0050687!5.39e-09!143;DOID:171!2.28e-08!10;DOID:162!3.51e-07!235;DOID:14566!5.72e-07!239;DOID:169!9.74e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:169;1.09e-44;6!DOID:3193;5.96e-34;2!DOID:962;5.96e-34;2!DOID:171;2.22e-27;10!DOID:1192;3.66e-23;3!DOID:3095;3.89e-13;22!DOID:2994;3.89e-13;22!DOID:3093;8.14e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.22e-44,6;DOID:3193,7.05e-34,2;DOID:962,7.05e-34,2;DOID:171,2.38e-27,10;DOID:1192,4.09e-23,3;DOID:3095,4.01e-13,22;DOID:2994,4.01e-13,22;DOID:3093,8.38e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0004645!2.67e-09!1;UBERON:0001256!2.67e-09!1;UBERON:0001259!2.67e-09!1;UBERON:0000013!6.30e-08!5;UBERON:0002410!6.30e-08!5;UBERON:0002046!1.23e-07!5;UBERON:0004117!1.23e-07!5;UBERON:0007689!1.23e-07!5;UBERON:0007123!1.23e-07!5;UBERON:0003091!1.23e-07!5 | |ontology_enrichment_uberon=UBERON:0004645!2.67e-09!1;UBERON:0001256!2.67e-09!1;UBERON:0001259!2.67e-09!1;UBERON:0000013!6.30e-08!5;UBERON:0002410!6.30e-08!5;UBERON:0002046!1.23e-07!5;UBERON:0004117!1.23e-07!5;UBERON:0007689!1.23e-07!5;UBERON:0007123!1.23e-07!5;UBERON:0003091!1.23e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.51e-53;5!UBERON:0002410;2.51e-53;5!UBERON:0003714;5.96e-34;2!UBERON:0000010;2.87e-30;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.87e-53,5;UBERON:0002410,2.87e-53,5;UBERON:0003714,7.05e-34,2;UBERON:0000010,3.09e-30,8;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p@chr11:126898086..126898090,- | |short_description=p@chr11:126898086..126898090,- | ||
}} | }} |
Latest revision as of 19:49, 23 July 2015
Short description: | p@chr11:126898086..126898090, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:126898086..126898090, - |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 8.52e-11 | 59 |
neuronal stem cell | 1.35e-09 | 8 |
ectodermal cell | 4.40e-09 | 72 |
migratory neural crest cell | 2.95e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.87e-53 | 5 |
autonomic nervous system | 2.87e-53 | 5 |
neural tissue | 7.05e-34 | 2 |
peripheral nervous system | 3.09e-30 | 8 |
nervous system | 1.68e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.22e-44 | 6 |
peripheral nerve sheath neoplasm | 7.05e-34 | 2 |
neurofibroma | 7.05e-34 | 2 |
neuroectodermal tumor | 2.38e-27 | 10 |
peripheral nervous system neoplasm | 4.09e-23 | 3 |
germ cell and embryonal cancer | 4.01e-13 | 22 |
germ cell cancer | 4.01e-13 | 22 |
nervous system cancer | 8.38e-07 | 11 |