FFCP PHASE1:Hg19::chr11:123989006..123989027,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:123989006..123989027,+ | |||
|coexpression_cluster_id=C64 | |coexpression_cluster_id=C64 | ||
|description=CAGE_peak_at_chr11:123989006..123989027,+ | |description=CAGE_peak_at_chr11:123989006..123989027,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002274!2.50e-10!5;CL:0000457!2.50e-10!5;CL:0002191!2.50e-10!5;CL:0000097!2.50e-10!5;CL:0000831!2.50e-10!5;CL:0002028!2.50e-10!5;CL:0000163!2.68e-07!9 | |ontology_enrichment_celltype=CL:0002274!2.50e-10!5;CL:0000457!2.50e-10!5;CL:0002191!2.50e-10!5;CL:0000097!2.50e-10!5;CL:0000831!2.50e-10!5;CL:0002028!2.50e-10!5;CL:0000163!2.68e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.29e-99;5!CL:0000163;1.97e-55;9!CL:0000151;6.11e-13;36!CL:0002592;7.26e-08;3 | |ontology_enrichment_celltype_v019=CL:0000097;2.29e-99;5!CL:0000163;1.97e-55;9!CL:0000151;6.11e-13;36!CL:0002592;7.26e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.30e-99,5;CL:0002028,2.30e-99,5;CL:0000163,1.97e-55,9;CL:0000151,4.57e-14,36;CL:0000839,1.13e-10,66;CL:0000557,1.63e-10,67;CL:0000766,8.70e-10,72;CL:0002592,6.34e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003498;7.26e-08;3!UBERON:0005985;7.26e-08;3!UBERON:0001621;7.26e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0003498;7.26e-08;3!UBERON:0005985;7.26e-08;3!UBERON:0001621;7.26e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.85e-09,76;UBERON:0001474,1.36e-08,82;UBERON:0001621,6.34e-08,3;UBERON:0004765,8.02e-08,90;UBERON:0002405,1.44e-07,93;UBERON:0002204,3.34e-07,167;UBERON:0002390,3.55e-07,98;UBERON:0003061,3.55e-07,98;UBERON:0001434,4.97e-07,100 | |||
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| ||
|short_description=p@chr11:123989006..123989027,+ | |short_description=p@chr11:123989006..123989027,+ | ||
}} | }} |
Latest revision as of 19:29, 23 July 2015
Short description: | p@chr11:123989006..123989027, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:123989006..123989027, + |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.30e-99 | 5 |
basophil mast progenitor cell | 2.30e-99 | 5 |
endocrine cell | 1.97e-55 | 9 |
secretory cell | 4.57e-14 | 36 |
myeloid lineage restricted progenitor cell | 1.13e-10 | 66 |
granulocyte monocyte progenitor cell | 1.63e-10 | 67 |
myeloid leukocyte | 8.70e-10 | 72 |
smooth muscle cell of the coronary artery | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.85e-09 | 76 |
bone element | 1.36e-08 | 82 |
coronary artery | 6.34e-08 | 3 |
skeletal element | 8.02e-08 | 90 |
immune system | 1.44e-07 | 93 |
musculoskeletal system | 3.34e-07 | 167 |
hematopoietic system | 3.55e-07 | 98 |
blood island | 3.55e-07 | 98 |
skeletal system | 4.97e-07 | 100 |