FFCP PHASE1:Hg19::chr11:123325159..123325173,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=53bp_to_ENST00000525757,uc001pyv.1_5end | |||
|cluster_id=chr11:123325159..123325173,+ | |||
|description=CAGE_peak_3_at_ENST00000525757_5end,CAGE_peak_3_at_uc001pyv.1_5end | |||
|id=chr11:123325159..123325173,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.44e-22!45;CL:0002057!5.09e-18!42;CL:0002194!4.95e-16!63;CL:0000576!4.95e-16!63;CL:0000040!4.95e-16!63;CL:0000559!4.95e-16!63;CL:0002009!2.62e-15!65;CL:0000839!7.94e-15!70;CL:0000557!1.65e-14!71;CL:0000766!4.72e-13!76;CL:0002087!3.34e-09!119;CL:0002031!1.78e-08!124;CL:0002150!1.53e-07!3;CL:0000861!1.53e-07!3;CL:0000763!3.25e-07!112;CL:0000049!3.25e-07!112;CL:0000738!3.36e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.42e-24;33!CL:0002057;6.42e-24;33!CL:0000473;4.95e-15;39!CL:0000234;4.95e-15;39!CL:0000576;1.90e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.43e-19,42;CL:0002057,2.43e-19,42;CL:0000473,1.23e-16,48;CL:0000234,1.23e-16,48;CL:0002194,7.46e-13,59;CL:0000576,7.46e-13,59;CL:0000040,7.46e-13,59;CL:0000559,7.46e-13,59;CL:0002009,2.29e-12,61;CL:0000839,2.84e-11,66;CL:0000557,4.48e-11,67;CL:0000766,3.67e-10,72 | |||
|ontology_enrichment_development_v019=CL:0002057;9.65e-15;42!UBERON:0008947;8.01e-10;29 | |||
|ontology_enrichment_disease=DOID:305!3.09e-08!106;DOID:0050687!4.85e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.58e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.22e-18!9;UBERON:0001474!1.71e-12!86;UBERON:0002371!5.05e-12!80;UBERON:0002390!4.01e-10!102;UBERON:0003061!4.01e-10!102;UBERON:0004765!1.75e-09!101;UBERON:0001434!1.75e-09!101;UBERON:0001557!4.21e-09!19;UBERON:0002193!1.58e-08!112;UBERON:0002405!3.18e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.22e-11;9!UBERON:0001557;2.22e-11;9!UBERON:0000072;3.98e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.42e-11,9;UBERON:0002371,1.62e-09,76;UBERON:0001474,1.14e-08,82;UBERON:0004765,1.03e-07,90;UBERON:0002405,2.14e-07,93;UBERON:0008947,2.79e-07,38;UBERON:0003258,2.79e-07,38;UBERON:0002390,6.51e-07,98;UBERON:0003061,6.51e-07,98;UBERON:0001434,9.84e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697287110717054,0,0,0.28769239232215,1.5369642391746,1.41889337933151,1.03423704220986,1.93645405075148,0,0,1.36453075028923,0.674170453335254,0.306083892370903,4.17207735198922,1.27867425159808,0,1.79517291859469,0,0,2.8369261234557,0,1.00499466102697,0.521482918420201,3.04064382587163,0,2.20966581592539,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,2.01121560067735,1.18009283054671,1.20505514941741,0.992645754591546,0.435758888184812,1.66089433377768,0.943819157121151,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0.23874448473769,0,0,0,0,0,0.824019371133798,0,0,0,0,0,0,0,0,1.07412704805365,0,0,0,0,0,0,0,0,0,0,0,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0,0.341826167541004,0,1.07709173291727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.337005664903385,0,0,0,0,0,0,0,0,0,0,0,0,1.65495977937749,1.88359751044335,0,0,0,0,0,0,0,0,1.83837029449262,1.46178634172371,1.39596276990456,0,0,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0.0801588202515337,0,0.19980960958213,0,0,0,5.47408232354969,0.248505071130865,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,0,0.399358000997982,0.429226048136571,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.48218348332112,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.26446520348538,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0,0,0.308801447160972,0,0,0,0.337884881306145,0,2.41801239211839,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0.606965604236632,0.91064876540519,0.0887023701626388,0,0.342976018874837,0,0,2.6002644994473,0.333694205676207,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50962843566674,0.0771741581079447,0,0,0,0.471353094203252,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@ENST00000525757,p3@uc001pyv.1 | |||
}} |
Latest revision as of 19:24, 23 July 2015
Short description: | p3@ENST00000525757, p3@uc001pyv.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000525757_5end, CAGE_peak_3_at_uc001pyv.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_ENST00000525757, uc001pyv.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.43e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.43e-19 | 42 |
defensive cell | 1.23e-16 | 48 |
phagocyte | 1.23e-16 | 48 |
monopoietic cell | 7.46e-13 | 59 |
monocyte | 7.46e-13 | 59 |
monoblast | 7.46e-13 | 59 |
promonocyte | 7.46e-13 | 59 |
macrophage dendritic cell progenitor | 2.29e-12 | 61 |
myeloid lineage restricted progenitor cell | 2.84e-11 | 66 |
granulocyte monocyte progenitor cell | 4.48e-11 | 67 |
myeloid leukocyte | 3.67e-10 | 72 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.42e-11 | 9 |
bone marrow | 1.62e-09 | 76 |
bone element | 1.14e-08 | 82 |
skeletal element | 1.03e-07 | 90 |
immune system | 2.14e-07 | 93 |
respiratory primordium | 2.79e-07 | 38 |
endoderm of foregut | 2.79e-07 | 38 |
hematopoietic system | 6.51e-07 | 98 |
blood island | 6.51e-07 | 98 |
skeletal system | 9.84e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.58e-07 | 106 |