FFCP PHASE1:Hg19::chr11:12222126..12222133,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:12222126..12222133,- | |||
|description=CAGE_peak_at_chr11:12222126..12222133,- | |description=CAGE_peak_at_chr11:12222126..12222133,- | ||
|id=chr11:12222126..12222133,- | |id=chr11:12222126..12222133,- | ||
|ontology_enrichment_celltype=CL:0000359!4.01e-18!32;CL:0000192!9.72e-15!42;CL:0000514!9.72e-15!42;CL:0000187!4.94e-12!54;CL:0000393!9.39e-12!60;CL:0000211!9.39e-12!60;CL:0000680!3.55e-11!57;CL:0000056!3.55e-11!57;CL:0000355!3.55e-11!57;CL:0000183!1.18e-10!59;CL:0000055!2.60e-09!180;CL:0002494!1.94e-08!16;CL:0002371!4.41e-08!591;CL:0000569!1.06e-07!4;CL:0000011!1.06e-07!4;CL:0000048!2.38e-07!430;CL:0002589!3.00e-07!2;CL:0000723!4.40e-07!436;CL:0002588!7.18e-07!2;CL:0000144!7.92e-07!625;CL:0000034!9.71e-07!444 | |ontology_enrichment_celltype=CL:0000359!4.01e-18!32;CL:0000192!9.72e-15!42;CL:0000514!9.72e-15!42;CL:0000187!4.94e-12!54;CL:0000393!9.39e-12!60;CL:0000211!9.39e-12!60;CL:0000680!3.55e-11!57;CL:0000056!3.55e-11!57;CL:0000355!3.55e-11!57;CL:0000183!1.18e-10!59;CL:0000055!2.60e-09!180;CL:0002494!1.94e-08!16;CL:0002371!4.41e-08!591;CL:0000569!1.06e-07!4;CL:0000011!1.06e-07!4;CL:0000048!2.38e-07!430;CL:0002589!3.00e-07!2;CL:0000723!4.40e-07!436;CL:0002588!7.18e-07!2;CL:0000144!7.92e-07!625;CL:0000034!9.71e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000359;9.50e-30;32!CL:0000346;2.22e-23;3!CL:1000428;2.22e-23;3!CL:0000192;1.50e-16;43!CL:0002559;1.91e-14;5!CL:0002595;4.69e-14;5!CL:0000187;3.79e-11;55!CL:0002596;9.87e-10;2!CL:0002589;1.17e-09;2!CL:0000393;6.31e-08;61!CL:0000211;6.31e-08;61!CL:0002539;1.52e-07;10!CL:0002592;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.74e-32,32;CL:0000192,6.26e-24,43;CL:0000514,6.26e-24,43;CL:0000346,2.35e-23,3;CL:1000428,2.35e-23,3;CL:0000187,1.30e-18,55;CL:0000680,1.27e-17,58;CL:0000056,1.27e-17,58;CL:0000355,1.27e-17,58;CL:0000393,9.84e-17,61;CL:0000211,9.84e-17,61;CL:0002559,1.97e-14,5;CL:0002595,4.69e-14,5;CL:0002596,9.46e-10,2;CL:0002589,1.22e-09,2;CL:0000222,3.79e-08,121;CL:0002539,1.42e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.50e-16;43!CL:0000355;7.60e-11;58 | |||
|ontology_enrichment_disease=DOID:2394!3.97e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;1.05e-27;33!UBERON:0004571;1.05e-27;33!UBERON:0000412;2.22e-23;3!UBERON:0001992;2.22e-23;3!UBERON:0001637;1.71e-19;42!UBERON:0003509;1.71e-19;42!UBERON:0004572;1.71e-19;42!UBERON:0000055;1.08e-14;65!UBERON:0002073;1.91e-14;5!UBERON:0007500;2.64e-14;56!UBERON:0001981;2.64e-14;56!UBERON:0004537;2.64e-14;56!UBERON:0003834;4.69e-14;5!UBERON:0001533;4.69e-14;5!UBERON:0003513;2.58e-10;7!UBERON:0005396;9.87e-10;2!UBERON:0001529;1.17e-09;2!UBERON:0007204;1.17e-09;2!UBERON:0002049;6.86e-09;75!UBERON:0007798;6.86e-09;75!UBERON:0002067;1.94e-08;9!UBERON:0000947;9.51e-08;21!UBERON:0010191;9.51e-08;21!UBERON:0004237;1.52e-07;10!UBERON:0004695;1.52e-07;10!UBERON:0002111;1.52e-07;10!UBERON:0004178;1.52e-07;10!UBERON:0003498;9.37e-07;3!UBERON:0005985;9.37e-07;3!UBERON:0001621;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,2.10e-31,33;UBERON:0004571,2.10e-31,33;UBERON:0001637,4.32e-31,42;UBERON:0003509,4.32e-31,42;UBERON:0004572,4.32e-31,42;UBERON:0000412,2.35e-23,3;UBERON:0001992,2.35e-23,3;UBERON:0002329,1.75e-22,71;UBERON:0003059,1.75e-22,71;UBERON:0007282,1.75e-22,71;UBERON:0004290,1.75e-22,71;UBERON:0009618,1.75e-22,71;UBERON:0003077,3.68e-22,72;UBERON:0007285,3.68e-22,72;UBERON:0007500,5.61e-22,59;UBERON:0001981,5.61e-22,59;UBERON:0004537,5.61e-22,59;UBERON:0006965,5.61e-22,59;UBERON:0007524,7.55e-22,73;UBERON:0007503,2.10e-20,78;UBERON:0000486,3.93e-19,83;UBERON:0004872,4.44e-19,83;UBERON:0000055,5.45e-19,68;UBERON:0002049,1.78e-16,78;UBERON:0007798,1.78e-16,78;UBERON:0001134,1.87e-16,62;UBERON:0002036,1.87e-16,62;UBERON:0003082,1.87e-16,62;UBERON:0002385,6.32e-16,64;UBERON:0001015,6.32e-16,64;UBERON:0000383,6.32e-16,64;UBERON:0002073,1.97e-14,5;UBERON:0005086,1.97e-14,5;UBERON:0004535,2.38e-14,109;UBERON:0003834,4.69e-14,5;UBERON:0001533,4.69e-14,5;UBERON:0001009,6.06e-14,112;UBERON:0003914,2.59e-13,117;UBERON:0005256,9.03e-13,122;UBERON:0000490,2.23e-10,148;UBERON:0003513,2.58e-10,7;UBERON:0005396,9.46e-10,2;UBERON:0001529,1.22e-09,2;UBERON:0007204,1.22e-09,2;UBERON:0003104,1.56e-09,160;UBERON:0009142,1.56e-09,160;UBERON:0002067,1.97e-08,9;UBERON:0004016,1.97e-08,9;UBERON:0010083,1.97e-08,9;UBERON:0000947,9.08e-08,21;UBERON:0010191,9.08e-08,21;UBERON:0000025,1.01e-07,192;UBERON:0004237,1.42e-07,10;UBERON:0004695,1.42e-07,10;UBERON:0002111,1.42e-07,10;UBERON:0004178,1.42e-07,10;UBERON:0002100,1.75e-07,199;UBERON:0003081,2.96e-07,203;UBERON:0000483,7.99e-07,306;UBERON:0000119,9.54e-07,309 | |||
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|short_description=p@chr11:12222126..12222133,- | |short_description=p@chr11:12222126..12222133,- | ||
}} | }} |
Latest revision as of 19:19, 23 July 2015
Short description: | p@chr11:12222126..12222133, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:12222126..12222133, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.74e-32 | 32 |
smooth muscle cell | 6.26e-24 | 43 |
smooth muscle myoblast | 6.26e-24 | 43 |
hair follicle dermal papilla cell | 2.35e-23 | 3 |
stem cell of epidermis | 2.35e-23 | 3 |
muscle cell | 1.30e-18 | 55 |
muscle precursor cell | 1.27e-17 | 58 |
myoblast | 1.27e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.27e-17 | 58 |
electrically responsive cell | 9.84e-17 | 61 |
electrically active cell | 9.84e-17 | 61 |
hair follicle cell | 1.97e-14 | 5 |
smooth muscle cell of the subclavian artery | 4.69e-14 | 5 |
smooth muscle cell of the carotid artery | 9.46e-10 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 1.22e-09 | 2 |
mesodermal cell | 3.79e-08 | 121 |
aortic smooth muscle cell | 1.42e-07 | 10 |