FFCP PHASE1:Hg19::chr11:121959907..121959911,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:121959907..121959911,- | |||
|description=CAGE_peak_at_chr11:121959907..121959911,- | |description=CAGE_peak_at_chr11:121959907..121959911,- | ||
|id=chr11:121959907..121959911,- | |id=chr11:121959907..121959911,- | ||
|ontology_enrichment_celltype=CL:0000055!2.37e-28!180;CL:0000057!1.68e-19!75;CL:0000680!1.67e-10!57;CL:0000056!1.67e-10!57;CL:0000355!1.67e-10!57;CL:0000393!1.61e-09!60;CL:0000211!1.61e-09!60;CL:0000187!1.82e-09!54;CL:0002620!5.40e-09!23;CL:0000183!1.68e-08!59 | |ontology_enrichment_celltype=CL:0000055!2.37e-28!180;CL:0000057!1.68e-19!75;CL:0000680!1.67e-10!57;CL:0000056!1.67e-10!57;CL:0000355!1.67e-10!57;CL:0000393!1.61e-09!60;CL:0000211!1.61e-09!60;CL:0000187!1.82e-09!54;CL:0002620!5.40e-09!23;CL:0000183!1.68e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.36e-09;23!CL:0000057;5.59e-08;73!CL:0002334;2.33e-07;12 | |ontology_enrichment_celltype_v019=CL:0002620;1.36e-09;23!CL:0000057;5.59e-08;73!CL:0002334;2.33e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.16e-19,76;CL:0000680,2.82e-10,58;CL:0000056,2.82e-10,58;CL:0000355,2.82e-10,58;CL:0002620,1.06e-09,23;CL:0000393,2.67e-09,61;CL:0000211,2.67e-09,61;CL:0000187,3.89e-09,55;CL:0002334,1.84e-07,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002385;1.33e-08;31!UBERON:0001015;1.33e-08;31!UBERON:0000383;1.33e-08;31!UBERON:0002204;3.30e-07;70 | |ontology_enrichment_uberon_v019=UBERON:0002385;1.33e-08;31!UBERON:0001015;1.33e-08;31!UBERON:0000383;1.33e-08;31!UBERON:0002204;3.30e-07;70 | ||
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|short_description=p@chr11:121959907..121959911,- | |short_description=p@chr11:121959907..121959911,- | ||
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Latest revision as of 19:15, 23 July 2015
Short description: | p@chr11:121959907..121959911, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:121959907..121959911, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.16e-19 | 76 |
muscle precursor cell | 2.82e-10 | 58 |
myoblast | 2.82e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.82e-10 | 58 |
skin fibroblast | 1.06e-09 | 23 |
electrically responsive cell | 2.67e-09 | 61 |
electrically active cell | 2.67e-09 | 61 |
muscle cell | 3.89e-09 | 55 |
preadipocyte | 1.84e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 3.76e-11 | 73 |
structure with developmental contribution from neural crest | 7.81e-11 | 132 |
paraxial mesoderm | 1.20e-10 | 72 |
presumptive paraxial mesoderm | 1.20e-10 | 72 |
somite | 1.94e-10 | 71 |
presomitic mesoderm | 1.94e-10 | 71 |
presumptive segmental plate | 1.94e-10 | 71 |
dermomyotome | 1.94e-10 | 71 |
trunk paraxial mesoderm | 1.94e-10 | 71 |
skeletal muscle tissue | 7.79e-10 | 62 |
striated muscle tissue | 7.79e-10 | 62 |
myotome | 7.79e-10 | 62 |
muscle tissue | 9.32e-10 | 64 |
musculature | 9.32e-10 | 64 |
musculature of body | 9.32e-10 | 64 |
multilaminar epithelium | 1.82e-09 | 83 |
epithelial vesicle | 4.87e-08 | 78 |
neural plate | 8.16e-08 | 82 |
presumptive neural plate | 8.16e-08 | 82 |
mesenchyme | 1.76e-07 | 160 |
entire embryonic mesenchyme | 1.76e-07 | 160 |
nervous system | 2.32e-07 | 89 |
central nervous system | 3.94e-07 | 81 |
neurectoderm | 4.14e-07 | 86 |
epithelium | 5.52e-07 | 306 |
brain grey matter | 6.97e-07 | 34 |
gray matter | 6.97e-07 | 34 |
cell layer | 7.78e-07 | 309 |
neural tube | 8.88e-07 | 56 |
neural rod | 8.88e-07 | 56 |
future spinal cord | 8.88e-07 | 56 |
neural keel | 8.88e-07 | 56 |