FFCP PHASE1:Hg19::chr11:121289627..121289644,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:121289627..121289644,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_at_chr11:121289627..121289644,+ | |description=CAGE_peak_at_chr11:121289627..121289644,+ | ||
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|ontology_enrichment_celltype=CL:0000738!3.09e-47!140;CL:0002057!1.50e-45!42;CL:0002087!9.44e-42!119;CL:0000860!9.81e-42!45;CL:0000037!4.03e-41!172;CL:0000566!4.03e-41!172;CL:0002032!2.36e-39!165;CL:0000837!2.36e-39!165;CL:0002031!3.06e-39!124;CL:0000988!1.11e-37!182;CL:0000766!5.86e-35!76;CL:0002194!1.13e-27!63;CL:0000576!1.13e-27!63;CL:0000040!1.13e-27!63;CL:0000559!1.13e-27!63;CL:0000839!5.60e-27!70;CL:0002009!1.73e-26!65;CL:0000557!1.94e-26!71;CL:0000763!2.49e-25!112;CL:0000049!2.49e-25!112;CL:0000838!6.42e-13!52;CL:0000542!1.50e-12!53;CL:0000051!1.50e-12!53;CL:0000945!2.39e-11!24;CL:0000826!2.39e-11!24;CL:0000134!7.11e-10!358;CL:0002320!2.47e-09!365;CL:0000094!1.04e-08!8;CL:0000219!2.29e-08!390;CL:0002393!7.00e-07!9;CL:0002397!7.00e-07!9 | |ontology_enrichment_celltype=CL:0000738!3.09e-47!140;CL:0002057!1.50e-45!42;CL:0002087!9.44e-42!119;CL:0000860!9.81e-42!45;CL:0000037!4.03e-41!172;CL:0000566!4.03e-41!172;CL:0002032!2.36e-39!165;CL:0000837!2.36e-39!165;CL:0002031!3.06e-39!124;CL:0000988!1.11e-37!182;CL:0000766!5.86e-35!76;CL:0002194!1.13e-27!63;CL:0000576!1.13e-27!63;CL:0000040!1.13e-27!63;CL:0000559!1.13e-27!63;CL:0000839!5.60e-27!70;CL:0002009!1.73e-26!65;CL:0000557!1.94e-26!71;CL:0000763!2.49e-25!112;CL:0000049!2.49e-25!112;CL:0000838!6.42e-13!52;CL:0000542!1.50e-12!53;CL:0000051!1.50e-12!53;CL:0000945!2.39e-11!24;CL:0000826!2.39e-11!24;CL:0000134!7.11e-10!358;CL:0002320!2.47e-09!365;CL:0000094!1.04e-08!8;CL:0000219!2.29e-08!390;CL:0002393!7.00e-07!9;CL:0002397!7.00e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.68e-48;33!CL:0002057;3.68e-48;33!CL:0000473;1.30e-37;39!CL:0000234;1.30e-37;39!CL:0000576;7.06e-28;48!CL:0000766;8.77e-19;69!CL:0000775;9.10e-10;3!CL:0002087;9.89e-09;104!CL:0000763;1.29e-08;100!CL:0000094;4.70e-08;8 | |ontology_enrichment_celltype_v019=CL:0000860;3.68e-48;33!CL:0002057;3.68e-48;33!CL:0000473;1.30e-37;39!CL:0000234;1.30e-37;39!CL:0000576;7.06e-28;48!CL:0000766;8.77e-19;69!CL:0000775;9.10e-10;3!CL:0002087;9.89e-09;104!CL:0000763;1.29e-08;100!CL:0000094;4.70e-08;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.71e-52,42;CL:0002057,5.71e-52,42;CL:0000473,5.29e-45,48;CL:0000234,5.29e-45,48;CL:0000766,7.04e-39,72;CL:0002194,3.03e-35,59;CL:0000576,3.03e-35,59;CL:0000040,3.03e-35,59;CL:0000559,3.03e-35,59;CL:0002009,5.51e-34,61;CL:0000839,3.65e-31,66;CL:0000557,1.19e-30,67;CL:0000738,7.16e-25,136;CL:0000763,1.30e-24,108;CL:0000049,1.30e-24,108;CL:0002087,1.28e-22,115;CL:0002031,1.67e-21,120;CL:0002032,2.67e-20,161;CL:0000837,2.67e-20,161;CL:0000037,2.92e-19,168;CL:0000988,4.80e-18,177;CL:0000775,9.30e-10,3;CL:0000094,4.76e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.83e-37;42 | |ontology_enrichment_development_v019=CL:0002057;1.83e-37;42 | ||
|ontology_enrichment_disease=DOID:0060058!5.39e-08!10 | |ontology_enrichment_disease=DOID:0060058!5.39e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:2355;1.39e-07;1 | |ontology_enrichment_disease_v019=DOID:2355;1.39e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2355,1.11e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.54e-31!102;UBERON:0003061!2.54e-31!102;UBERON:0002193!3.43e-27!112;UBERON:0002371!1.21e-23!80;UBERON:0001474!3.40e-21!86;UBERON:0004765!2.20e-16!101;UBERON:0001434!2.20e-16!101;UBERON:0002405!6.24e-15!115;UBERON:0000178!2.31e-11!15;UBERON:0000179!2.31e-11!15;UBERON:0000463!2.31e-11!15;UBERON:0002384!4.55e-09!375;UBERON:0003081!3.79e-08!216;UBERON:0002204!5.11e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!2.54e-31!102;UBERON:0003061!2.54e-31!102;UBERON:0002193!3.43e-27!112;UBERON:0002371!1.21e-23!80;UBERON:0001474!3.40e-21!86;UBERON:0004765!2.20e-16!101;UBERON:0001434!2.20e-16!101;UBERON:0002405!6.24e-15!115;UBERON:0000178!2.31e-11!15;UBERON:0000179!2.31e-11!15;UBERON:0000463!2.31e-11!15;UBERON:0002384!4.55e-09!375;UBERON:0003081!3.79e-08!216;UBERON:0002204!5.11e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.74e-15;15!UBERON:0000179;4.74e-15;15!UBERON:0000463;4.74e-15;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.74e-15;15!UBERON:0000179;4.74e-15;15!UBERON:0000463;4.74e-15;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.58e-36,98;UBERON:0003061,2.58e-36,98;UBERON:0002193,1.49e-32,108;UBERON:0002371,1.27e-26,76;UBERON:0001474,2.03e-24,82;UBERON:0004765,6.18e-22,90;UBERON:0002405,4.10e-21,93;UBERON:0001434,2.20e-19,100;UBERON:0003081,3.55e-15,203;UBERON:0000178,4.03e-15,15;UBERON:0000179,4.03e-15,15;UBERON:0000463,4.03e-15,15;UBERON:0002204,3.99e-10,167;UBERON:0000926,4.48e-08,315;UBERON:0004120,4.48e-08,315;UBERON:0006603,4.48e-08,315 | |||
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|short_description=p@chr11:121289627..121289644,+ | |short_description=p@chr11:121289627..121289644,+ | ||
}} | }} |
Latest revision as of 19:11, 23 July 2015
Short description: | p@chr11:121289627..121289644, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:121289627..121289644, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.71e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.71e-52 | 42 |
defensive cell | 5.29e-45 | 48 |
phagocyte | 5.29e-45 | 48 |
myeloid leukocyte | 7.04e-39 | 72 |
monopoietic cell | 3.03e-35 | 59 |
monocyte | 3.03e-35 | 59 |
monoblast | 3.03e-35 | 59 |
promonocyte | 3.03e-35 | 59 |
macrophage dendritic cell progenitor | 5.51e-34 | 61 |
myeloid lineage restricted progenitor cell | 3.65e-31 | 66 |
granulocyte monocyte progenitor cell | 1.19e-30 | 67 |
leukocyte | 7.16e-25 | 136 |
myeloid cell | 1.30e-24 | 108 |
common myeloid progenitor | 1.30e-24 | 108 |
nongranular leukocyte | 1.28e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.67e-21 | 120 |
hematopoietic oligopotent progenitor cell | 2.67e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.67e-20 | 161 |
hematopoietic stem cell | 2.92e-19 | 168 |
hematopoietic cell | 4.80e-18 | 177 |
neutrophil | 9.30e-10 | 3 |
granulocyte | 4.76e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.58e-36 | 98 |
blood island | 2.58e-36 | 98 |
hemolymphoid system | 1.49e-32 | 108 |
bone marrow | 1.27e-26 | 76 |
bone element | 2.03e-24 | 82 |
skeletal element | 6.18e-22 | 90 |
immune system | 4.10e-21 | 93 |
skeletal system | 2.20e-19 | 100 |
lateral plate mesoderm | 3.55e-15 | 203 |
blood | 4.03e-15 | 15 |
haemolymphatic fluid | 4.03e-15 | 15 |
organism substance | 4.03e-15 | 15 |
musculoskeletal system | 3.99e-10 | 167 |
mesoderm | 4.48e-08 | 315 |
mesoderm-derived structure | 4.48e-08 | 315 |
presumptive mesoderm | 4.48e-08 | 315 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.11e-07 | 1 |