FFCP PHASE1:Hg19::chr11:12107912..12107932,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:12107912..12107932,- to FFCP PHASE1:Hg19::chr11:12107912..12107932,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:12107912..12107932,- | |||
|description=CAGE_peak_at_chr11:12107912..12107932,- | |||
|id=chr11:12107912..12107932,- | |||
|ontology_enrichment_celltype=CL:0000548!7.03e-18!679;CL:0000004!7.03e-18!679;CL:0000255!7.03e-18!679;CL:0000012!2.24e-17!682;CL:0002371!4.41e-17!591;CL:0000144!9.48e-16!625;CL:0000055!9.61e-16!180;CL:0000220!7.53e-15!246;CL:0002321!2.07e-14!248;CL:0000003!1.11e-11!722;CL:0000359!1.41e-11!32;CL:0000192!1.57e-10!42;CL:0000514!1.57e-10!42;CL:0000680!3.29e-09!57;CL:0000056!3.29e-09!57;CL:0000355!3.29e-09!57;CL:0000187!5.26e-09!54;CL:0000183!5.38e-09!59;CL:0000057!1.38e-08!75;CL:0000222!1.81e-08!119;CL:0002620!2.30e-08!23;CL:0002202!8.36e-08!9;CL:0002632!8.36e-08!9;CL:0000063!1.45e-07!578;CL:0000393!2.34e-07!60;CL:0000211!2.34e-07!60;CL:0000066!7.09e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.83e-13;32!CL:0002202;9.11e-12;9!CL:0002632;9.11e-12;9!CL:0002368;5.74e-10;13!CL:0002594;1.96e-09;4!CL:0000569;2.60e-09;4!CL:0002570;3.79e-09;8!CL:0000307;5.51e-08;3!CL:0002494;9.63e-08;16!CL:0002328;1.80e-07;3!CL:0000192;2.28e-07;43!CL:0000134;2.89e-07;55!CL:0000723;5.22e-07;61!CL:0000048;9.25e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.17e-14,32;CL:0002202,7.85e-12,9;CL:0002632,7.85e-12,9;CL:0002368,4.03e-10,13;CL:0002594,1.14e-09,4;CL:0000192,1.58e-09,43;CL:0000514,1.58e-09,43;CL:0000569,1.94e-09,4;CL:0000011,1.94e-09,4;CL:0002570,2.34e-09,8;CL:0000068,3.04e-08,3;CL:0000069,3.04e-08,3;CL:0000307,3.04e-08,3;CL:0000377,3.04e-08,3;CL:0000680,5.72e-08,58;CL:0000056,5.72e-08,58;CL:0000355,5.72e-08,58;CL:0002494,1.01e-07,16;CL:0000187,1.17e-07,55;CL:0002328,1.59e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000011;2.60e-09;4!CL:0000377;5.51e-08;3!CL:0000514;2.28e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.13e-13!79;UBERON:0007798!1.13e-13!79;UBERON:0000055!1.52e-13!69;UBERON:0001981!3.34e-12!60;UBERON:0007500!3.34e-12!60;UBERON:0004537!3.34e-12!60;UBERON:0006965!3.34e-12!60;UBERON:0003914!3.71e-12!118;UBERON:0000914!1.72e-11!83;UBERON:0002329!1.72e-11!83;UBERON:0003077!1.72e-11!83;UBERON:0003059!1.72e-11!83;UBERON:0007282!1.72e-11!83;UBERON:0009618!1.72e-11!83;UBERON:0007285!1.72e-11!83;UBERON:0004872!6.27e-11!84;UBERON:0001637!7.42e-11!42;UBERON:0003509!7.42e-11!42;UBERON:0004572!7.42e-11!42;UBERON:0000486!5.34e-10!82;UBERON:0004535!6.50e-10!110;UBERON:0005256!1.51e-09!143;UBERON:0002100!2.90e-09!216;UBERON:0001009!3.90e-09!113;UBERON:0000490!6.31e-09!138;UBERON:0002199!7.79e-09!45;UBERON:0002416!7.79e-09!45;UBERON:0004290!9.02e-09!70;UBERON:0004573!2.41e-08!33;UBERON:0004571!2.41e-08!33;UBERON:0002097!3.74e-08!40;UBERON:0002385!4.48e-08!63;UBERON:0001015!4.48e-08!63;UBERON:0000383!4.48e-08!63;UBERON:0001134!8.69e-08!61;UBERON:0002036!8.69e-08!61;UBERON:0003082!8.69e-08!61;UBERON:0003104!1.90e-07!238;UBERON:0009142!1.90e-07!238;UBERON:0003102!2.26e-07!95;UBERON:0000475!3.31e-07!365;UBERON:0000119!6.90e-07!312;UBERON:0000467!9.07e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;1.96e-09;4!UBERON:0001637;5.97e-09;42!UBERON:0003509;5.97e-09;42!UBERON:0004572;5.97e-09;42!UBERON:0004573;5.45e-08;33!UBERON:0004571;5.45e-08;33!UBERON:0004815;1.80e-07;3!UBERON:0002031;1.80e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.02e-13,83;UBERON:0001637,7.29e-13,42;UBERON:0003509,7.29e-13,42;UBERON:0004572,7.29e-13,42;UBERON:0003914,1.43e-11,117;UBERON:0007500,2.22e-11,59;UBERON:0001981,2.22e-11,59;UBERON:0004537,2.22e-11,59;UBERON:0006965,2.22e-11,59;UBERON:0000055,2.96e-10,68;UBERON:0001310,1.14e-09,4;UBERON:0004535,1.44e-09,109;UBERON:0001009,4.07e-09,112;UBERON:0004573,1.03e-08,33;UBERON:0004571,1.03e-08,33;UBERON:0002049,3.13e-08,78;UBERON:0007798,3.13e-08,78;UBERON:0004815,1.59e-07,3;UBERON:0002031,1.59e-07,3;UBERON:0002329,1.62e-07,71;UBERON:0003059,1.62e-07,71;UBERON:0007282,1.62e-07,71;UBERON:0004290,1.62e-07,71;UBERON:0009618,1.62e-07,71;UBERON:0003077,2.41e-07,72;UBERON:0007285,2.41e-07,72;UBERON:0000486,2.69e-07,83;UBERON:0007524,3.52e-07,73;UBERON:0001134,3.52e-07,62;UBERON:0002036,3.52e-07,62;UBERON:0003082,3.52e-07,62;UBERON:0007503,3.61e-07,78;UBERON:0002385,7.97e-07,64;UBERON:0001015,7.97e-07,64;UBERON:0000383,7.97e-07,64 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0.982935746006035,0.697801167972428,0.218441372130172,0.527533956456907,0.247532705920093,0.662794751455832,0,1.80808358407193,2.92124036154949,0.975865597581014,0.61560529038394,0.204000691244253,0.313454721478088,0,0,0.376627918784408,0,0,0,0,0,0,2.75826367343678,2.71085326900425,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,1.00267582127178,0.289693037921647,2.3858578411533,0.486634870302636,0.0945348171640679,0.443458794925128,0.614843499851882,0,0.364295288292542,0,0,0,0,0,0,0,0.596287222100115,0,0,0,0.419499436209906,0,1.04497483268405,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,3.06633274931766,2.84779697870439,0.732806975721629,0,0,0.872188104285069,0,0.633152558322899,8.20936921041957,1.43418310374407,0.354668382198357,0,5.33744978648525,1.2333377420858,0,0,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0.485618833104395,0.561803226808994,0,0.245668634623536,0,0,0.247266929278557,1.82032272387605,0.718618141816238,0.168336113954066,0.375355559615893,0,3.07284334616587,1.22595118319608,0.300476117813194,0.453728732640084,7.71375433462106,1.06778694409284,0.635795703478686,4.20127534518163,0.721367704669072,7.47157566132325,0.558350568994769,3.03797398034279,0.779496041289589,6.31084435610286,0.552299391853796,0,5.68015348026583,0.705264687593482,1.69560592310488,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,6.90674606762403,0,0,0,0,0,0.330881918197182,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0.768251997860379,1.1240175325762,0.201057944823262,0.277765335475589,0,0,0,0.115930404975077,0.821860859650752,0.144366447761074,0.925971025153221,0,0,0,0,0,0.148631162288728,1.87467667973554,0.839910640994298,0.141775097242386,0.268675568108545,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0.381988425558278,0,0,0,0,0,1.00917975910825,0,1.1734125731352,0.129271715757778,0,4.22651376278,0.797814349754612,2.08014873822732,0.257207374262142,0,0,1.57275793023962,0,0,0.977208552881205,0.710783897485092,3.95975936466715,0.301439377059586,0,0.099972991182057,0,0,0,0.479249710983165,0,0,1.01346914667305,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.713715955188647,0.946214490203608,0.117141414992713,0,0,1.03473071292505,0.664225598535437,2.02806085395873,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0.604780586659361,0.496215615637554,3.6830873589135,0.280660094433074,0.384417447767103,0,0.482561763430822,1.48418066444991,0.925258162815933,0.177561725313127,0.410635780069046,0,0.232420756919918,0,0.802025881213139,0.0920809889358963,0,0.364182336013434,0.393373244878272,0.902399225814824,0.924184045252977,0.784349769176855,0,1.16106791782163,0,0.170093705276516,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0.457847324091717,0.41254749960294,2.29706215198469,1.30012049207304,0,0.096670718292122,0.154048617114644,0,0.413509717453592,0,0,0.170453254832202,0.0890320356467374,0.330569830721956,0,1.78657797492418,0,0,5.98143458978216,2.0911118104818,0.308033580176089,0.532306030317022,0.869932992075073,2.40921484835096,1.71749864090389,0.744316738719335,0.949138274156178,0,0,0,1.27281299170375,1.56989728039846,0.179872457583315,0.274537029736055,0.235624804691373,1.2130948894399,0,0.421258456238981,0,0.243713489631284,2.11300293513511,0.136499911407986,0,0,4.41092274836899,0,0.876901770507525,0,0.655894752046633,3.44947640836597,1.54911749049875,3.66204283291914,1.43411352204052,0.196498082026242,1.78335525740625,0.709522128141196,0.422215270595328,0,0,0,1.92444225451024,8.04362730642945,5.44454924306613,0.376575203107117,0,1.68471475667626,0.443430153536676,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0.568272293612826,1.19372242368845,0.296964680832639,0.307160702099232,0,0,0.333926115068718,0,0,0.796991953004279,0.276283915531148,0,0,0,0.933118762985422,0.179736702294654,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.1137934482855,1.01701460117107,0,0,0,0.173624994933292,0,0,0,0.442317039724898,0,0,0.10893846351899,1.53366118706464,0,0.683652335082007,0,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0.485560759068186,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0.173559738335131,1.86185555087318,2.78589461057288,0,0.171986032471617,0.19351266257817,0,0,0.0969890164884194,0,0,0.274083849293502,0.19871461170299,0.0633107959558787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| ||
|short_description=p@chr11:12107912..12107932,- | |||
}} | }} |
Latest revision as of 19:10, 23 July 2015
Short description: | p@chr11:12107912..12107932, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:12107912..12107932, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.17e-14 | 32 |
epithelial cell of tracheobronchial tree | 7.85e-12 | 9 |
epithelial cell of lower respiratory tract | 7.85e-12 | 9 |
respiratory epithelial cell | 4.03e-10 | 13 |
smooth muscle cell of the umbilical artery | 1.14e-09 | 4 |
smooth muscle cell | 1.58e-09 | 43 |
smooth muscle myoblast | 1.58e-09 | 43 |
cardiac mesenchymal cell | 1.94e-09 | 4 |
migratory trunk neural crest cell | 1.94e-09 | 4 |
mesenchymal stem cell of adipose | 2.34e-09 | 8 |
duct epithelial cell | 3.04e-08 | 3 |
branched duct epithelial cell | 3.04e-08 | 3 |
tracheal epithelial cell | 3.04e-08 | 3 |
tracheoblast | 3.04e-08 | 3 |
muscle precursor cell | 5.72e-08 | 58 |
myoblast | 5.72e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.72e-08 | 58 |
cardiocyte | 1.01e-07 | 16 |
muscle cell | 1.17e-07 | 55 |
bronchial epithelial cell | 1.59e-07 | 3 |