FFCP PHASE1:Hg19::chr11:119622634..119622668,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:119622634..119622668,+ | |||
|coexpression_cluster_id=C2101 | |coexpression_cluster_id=C2101 | ||
|description=CAGE_peak_at_chr11:119622634..119622668,+ | |description=CAGE_peak_at_chr11:119622634..119622668,+ | ||
|id=chr11:119622634..119622668,+ | |id=chr11:119622634..119622668,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.69e-33!24;CL:0000826!2.69e-33!24;CL:0000838!1.09e-20!52;CL:0000542!3.18e-20!53;CL:0000051!3.18e-20!53;CL:0000988!9.28e-15!182;CL:0000738!1.38e-13!140;CL:0002031!4.77e-13!124;CL:0002032!6.09e-13!165;CL:0000837!6.09e-13!165;CL:0000037!3.64e-12!172;CL:0000566!3.64e-12!172;CL:0000236!1.54e-10!14;CL:0002087!5.46e-10!119;CL:0000785!3.50e-09!2;CL:0000955!3.50e-09!2;CL:0000818!3.50e-09!2;CL:0000954!3.50e-09!2;CL:0000816!3.50e-09!2;CL:0000453!8.00e-09!5;CL:0000080!1.88e-07!6 | |ontology_enrichment_celltype=CL:0000945!2.69e-33!24;CL:0000826!2.69e-33!24;CL:0000838!1.09e-20!52;CL:0000542!3.18e-20!53;CL:0000051!3.18e-20!53;CL:0000988!9.28e-15!182;CL:0000738!1.38e-13!140;CL:0002031!4.77e-13!124;CL:0002032!6.09e-13!165;CL:0000837!6.09e-13!165;CL:0000037!3.64e-12!172;CL:0000566!3.64e-12!172;CL:0000236!1.54e-10!14;CL:0002087!5.46e-10!119;CL:0000785!3.50e-09!2;CL:0000955!3.50e-09!2;CL:0000818!3.50e-09!2;CL:0000954!3.50e-09!2;CL:0000816!3.50e-09!2;CL:0000453!8.00e-09!5;CL:0000080!1.88e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000453;7.82e-26;5!CL:0000945;4.07e-21;24!CL:0000990;1.15e-14;8!CL:0000451;4.10e-12;10!CL:0000542;3.79e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,9.27e-26,5;CL:0000945,3.60e-21,24;CL:0000826,3.60e-21,24;CL:0000990,1.26e-14,8;CL:0000838,5.02e-13,52;CL:0000542,9.03e-13,53;CL:0000051,9.03e-13,53;CL:0000988,3.51e-12,177;CL:0000451,4.42e-12,10;CL:0000738,2.38e-09,136;CL:0002032,9.86e-08,161;CL:0000837,9.86e-08,161;CL:0000037,2.30e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000051;3.79e-07;53 | |||
|ontology_enrichment_disease=DOID:0060058!5.32e-21!10 | |ontology_enrichment_disease=DOID:0060058!5.32e-21!10 | ||
|ontology_enrichment_disease_v019=DOID:630;1.78e-15;1!DOID:0050177;1.78e-15;1!DOID:0050427;1.78e-15;1!DOID:0060058;1.86e-13;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.54e-15,1;DOID:0050177,1.54e-15,1;DOID:0050427,1.54e-15,1;DOID:0060058,1.75e-13,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.52e-15!7;UBERON:0002106!1.03e-13!3;UBERON:0004854!1.03e-13!3;UBERON:0009034!1.03e-13!3;UBERON:0002095!1.03e-13!3;UBERON:0004782!1.03e-13!3;UBERON:0003281!1.03e-13!3;UBERON:0009664!1.03e-13!3;UBERON:0002296!1.03e-13!3;UBERON:0005602!1.03e-13!3;UBERON:0001179!1.03e-13!3;UBERON:0006293!1.03e-13!3 | |ontology_enrichment_uberon=UBERON:0004177!2.52e-15!7;UBERON:0002106!1.03e-13!3;UBERON:0004854!1.03e-13!3;UBERON:0009034!1.03e-13!3;UBERON:0002095!1.03e-13!3;UBERON:0004782!1.03e-13!3;UBERON:0003281!1.03e-13!3;UBERON:0009664!1.03e-13!3;UBERON:0002296!1.03e-13!3;UBERON:0005602!1.03e-13!3;UBERON:0001179!1.03e-13!3;UBERON:0006293!1.03e-13!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.45e-13;10!UBERON:0000178;4.36e-09;15!UBERON:0000179;4.36e-09;15!UBERON:0000463;4.36e-09;15!UBERON:0002390;3.13e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.67e-13,10;UBERON:0000358,2.67e-13,10;UBERON:0000307,2.67e-13,10;UBERON:0000091,2.67e-13,10;UBERON:0000087,2.67e-13,10;UBERON:0007010,2.67e-13,10;UBERON:0007806,2.67e-13,10;UBERON:0008780,2.67e-13,10;UBERON:0005728,2.67e-13,10;UBERON:0000178,4.61e-09,15;UBERON:0000179,4.61e-09,15;UBERON:0000463,4.61e-09,15 | |||
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| ||
|short_description=p@chr11:119622634..119622668,+ | |short_description=p@chr11:119622634..119622668,+ | ||
}} | }} |
Latest revision as of 19:03, 23 July 2015
Short description: | p@chr11:119622634..119622668, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:119622634..119622668, + |
Coexpression cluster: | C2101_adult_B_xeroderma_lymphoma_signet_appendix_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 9.27e-26 | 5 |
lymphocyte of B lineage | 3.60e-21 | 24 |
pro-B cell | 3.60e-21 | 24 |
conventional dendritic cell | 1.26e-14 | 8 |
lymphoid lineage restricted progenitor cell | 5.02e-13 | 52 |
lymphocyte | 9.03e-13 | 53 |
common lymphoid progenitor | 9.03e-13 | 53 |
hematopoietic cell | 3.51e-12 | 177 |
dendritic cell | 4.42e-12 | 10 |
leukocyte | 2.38e-09 | 136 |
hematopoietic oligopotent progenitor cell | 9.86e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.86e-08 | 161 |
hematopoietic stem cell | 2.30e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.67e-13 | 10 |
blastocyst | 2.67e-13 | 10 |
blastula | 2.67e-13 | 10 |
bilaminar disc | 2.67e-13 | 10 |
inner cell mass | 2.67e-13 | 10 |
cleaving embryo | 2.67e-13 | 10 |
connecting stalk | 2.67e-13 | 10 |
inner cell mass derived epiblast | 2.67e-13 | 10 |
extraembryonic mesoderm | 2.67e-13 | 10 |
blood | 4.61e-09 | 15 |
haemolymphatic fluid | 4.61e-09 | 15 |
organism substance | 4.61e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.54e-15 | 1 |
monogenic disease | 1.54e-15 | 1 |
xeroderma pigmentosum | 1.54e-15 | 1 |
lymphoma | 1.75e-13 | 10 |