FFCP PHASE1:Hg19::chr11:118186586..118186607,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:118186586..118186607,+ | |||
|coexpression_cluster_id=C3090 | |||
|description=CAGE_peak_at_chr11:118186586..118186607,+ | |description=CAGE_peak_at_chr11:118186586..118186607,+ | ||
|id=chr11:118186586..118186607,+ | |id=chr11:118186586..118186607,+ | ||
|ontology_enrichment_celltype=CL:0000791!5.06e-33!18;CL:0000789!5.06e-33!18;CL:0002420!5.06e-33!18;CL:0002419!5.06e-33!18;CL:0000790!5.06e-33!18;CL:0000084!9.51e-33!25;CL:0000827!9.51e-33!25;CL:0000838!5.55e-21!52;CL:0000542!1.79e-20!53;CL:0000051!1.79e-20!53;CL:0000625!2.39e-20!11;CL:0000624!4.92e-12!6;CL:0000623!8.24e-10!3;CL:0000825!8.24e-10!3;CL:0000842!1.70e-09!3;CL:0002087!2.57e-09!119;CL:0000738!9.21e-08!140;CL:0000224!3.31e-07!4 | |ontology_enrichment_celltype=CL:0000791!5.06e-33!18;CL:0000789!5.06e-33!18;CL:0002420!5.06e-33!18;CL:0002419!5.06e-33!18;CL:0000790!5.06e-33!18;CL:0000084!9.51e-33!25;CL:0000827!9.51e-33!25;CL:0000838!5.55e-21!52;CL:0000542!1.79e-20!53;CL:0000051!1.79e-20!53;CL:0000625!2.39e-20!11;CL:0000624!4.92e-12!6;CL:0000623!8.24e-10!3;CL:0000825!8.24e-10!3;CL:0000842!1.70e-09!3;CL:0002087!2.57e-09!119;CL:0000738!9.21e-08!140;CL:0000224!3.31e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.37e-24;18!CL:0000789;7.37e-24;18!CL:0002419;7.37e-24;18!CL:0000625;1.58e-22;11!CL:0000084;6.90e-17;25!CL:0000226;2.37e-10;3!CL:0000623;2.37e-10;3!CL:0000842;2.37e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.49e-24,18;CL:0000789,9.49e-24,18;CL:0002420,9.49e-24,18;CL:0002419,9.49e-24,18;CL:0000790,9.49e-24,18;CL:0000625,2.08e-22,11;CL:0000084,8.25e-17,25;CL:0000827,8.25e-17,25;CL:0000838,7.66e-12,52;CL:0000542,1.38e-11,53;CL:0000051,1.38e-11,53;CL:0000623,1.62e-10,3;CL:0000825,1.62e-10,3;CL:0000226,3.31e-10,3;CL:0000842,3.31e-10,3 | |||
|ontology_enrichment_development_v019=CL:0000790;7.37e-24;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.25e-14!7;UBERON:0002370!3.25e-12!4;UBERON:0005058!3.25e-12!4;UBERON:0009113!3.25e-12!4;UBERON:0003295!3.25e-12!4;UBERON:0005562!3.25e-12!4;UBERON:0000178!5.29e-11!15;UBERON:0000179!5.29e-11!15;UBERON:0000463!5.29e-11!15;UBERON:0003351!3.95e-08!6;UBERON:0000974!4.83e-07!10;UBERON:0001042!5.09e-07!10;UBERON:0009145!5.09e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.20e-15;2!UBERON:0005058;1.20e-15;2!UBERON:0009113;1.20e-15;2!UBERON:0000029;8.44e-09;1!UBERON:0004177;9.02e-07;5!UBERON:0005057;9.02e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,6.50e-09,1;UBERON:0002370,2.38e-08,4;UBERON:0005058,2.38e-08,4;UBERON:0009113,2.38e-08,4;UBERON:0003295,2.38e-08,4;UBERON:0005562,2.38e-08,4 | |||
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| ||
|short_description=p@chr11:118186586..118186607,+ | |short_description=p@chr11:118186586..118186607,+ | ||
}} | }} |
Latest revision as of 18:45, 23 July 2015
Short description: | p@chr11:118186586..118186607, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:118186586..118186607, + |
Coexpression cluster: | C3090_thymus_CD4_CD8_lymph_blood_vein_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.49e-24 | 18 |
alpha-beta T cell | 9.49e-24 | 18 |
immature T cell | 9.49e-24 | 18 |
mature T cell | 9.49e-24 | 18 |
immature alpha-beta T cell | 9.49e-24 | 18 |
CD8-positive, alpha-beta T cell | 2.08e-22 | 11 |
T cell | 8.25e-17 | 25 |
pro-T cell | 8.25e-17 | 25 |
lymphoid lineage restricted progenitor cell | 7.66e-12 | 52 |
lymphocyte | 1.38e-11 | 53 |
common lymphoid progenitor | 1.38e-11 | 53 |
natural killer cell | 1.62e-10 | 3 |
pro-NK cell | 1.62e-10 | 3 |
single nucleate cell | 3.31e-10 | 3 |
mononuclear cell | 3.31e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
lymph node | 6.50e-09 | 1 |
thymus | 2.38e-08 | 4 |
hemolymphoid system gland | 2.38e-08 | 4 |
thymic region | 2.38e-08 | 4 |
pharyngeal gland | 2.38e-08 | 4 |
thymus primordium | 2.38e-08 | 4 |