FFCP PHASE1:Hg19::chr11:117689117..117689141,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000531850_5end | |association_with_transcript=-16bp_to_ENST00000531850_5end | ||
|cluster_id=chr11:117689117..117689141,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_1_at_ENST00000531850_5end | |description=CAGE_peak_1_at_ENST00000531850_5end | ||
|id=chr11:117689117..117689141,+ | |id=chr11:117689117..117689141,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.25e-90!42;CL:0000860!1.65e-83!45;CL:0000766!3.82e-69!76;CL:0002009!1.25e-63!65;CL:0000557!2.12e-60!71;CL:0002194!4.94e-59!63;CL:0000576!4.94e-59!63;CL:0000040!4.94e-59!63;CL:0000559!4.94e-59!63;CL:0000738!5.29e-59!140;CL:0000839!4.88e-55!70;CL:0000763!6.93e-48!112;CL:0000049!6.93e-48!112;CL:0000037!2.13e-47!172;CL:0000566!2.13e-47!172;CL:0000988!7.72e-46!182;CL:0002087!9.28e-44!119;CL:0002031!3.32e-41!124;CL:0002032!2.71e-38!165;CL:0000837!2.71e-38!165;CL:0000134!2.68e-18!358;CL:0002320!1.12e-17!365;CL:0000219!1.75e-15!390;CL:0000094!1.52e-13!8;CL:0000048!7.33e-13!430;CL:0000034!8.74e-13!444;CL:0000081!9.99e-13!11;CL:0000723!1.73e-12!436;CL:0002393!6.16e-12!9;CL:0002397!6.16e-12!9;CL:0000767!5.53e-10!3;CL:0000842!6.43e-10!3;CL:0000784!7.69e-10!3;CL:0000623!6.60e-09!3;CL:0000825!6.60e-09!3;CL:0000080!3.62e-08!6;CL:0000224!1.59e-07!4;CL:0000771!2.21e-07!2;CL:0001014!8.08e-07!2;CL:0001016!8.08e-07!2 | |ontology_enrichment_celltype=CL:0002057!3.25e-90!42;CL:0000860!1.65e-83!45;CL:0000766!3.82e-69!76;CL:0002009!1.25e-63!65;CL:0000557!2.12e-60!71;CL:0002194!4.94e-59!63;CL:0000576!4.94e-59!63;CL:0000040!4.94e-59!63;CL:0000559!4.94e-59!63;CL:0000738!5.29e-59!140;CL:0000839!4.88e-55!70;CL:0000763!6.93e-48!112;CL:0000049!6.93e-48!112;CL:0000037!2.13e-47!172;CL:0000566!2.13e-47!172;CL:0000988!7.72e-46!182;CL:0002087!9.28e-44!119;CL:0002031!3.32e-41!124;CL:0002032!2.71e-38!165;CL:0000837!2.71e-38!165;CL:0000134!2.68e-18!358;CL:0002320!1.12e-17!365;CL:0000219!1.75e-15!390;CL:0000094!1.52e-13!8;CL:0000048!7.33e-13!430;CL:0000034!8.74e-13!444;CL:0000081!9.99e-13!11;CL:0000723!1.73e-12!436;CL:0002393!6.16e-12!9;CL:0002397!6.16e-12!9;CL:0000767!5.53e-10!3;CL:0000842!6.43e-10!3;CL:0000784!7.69e-10!3;CL:0000623!6.60e-09!3;CL:0000825!6.60e-09!3;CL:0000080!3.62e-08!6;CL:0000224!1.59e-07!4;CL:0000771!2.21e-07!2;CL:0001014!8.08e-07!2;CL:0001016!8.08e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.15e-61;33!CL:0002057;8.15e-61;33!CL:0000473;3.08e-42;39!CL:0000234;3.08e-42;39!CL:0000576;5.27e-40;48!CL:0000766;1.60e-29;69!CL:0000094;3.69e-23;8!CL:0002393;1.44e-22;6!CL:0002397;1.44e-22;6!CL:0000081;1.05e-16;11!CL:0000767;1.99e-16;3!CL:0000763;9.66e-16;100!CL:0002087;9.36e-15;104!CL:0000771;9.74e-12;2!CL:0000738;1.44e-10;136!CL:0000226;3.88e-08;3!CL:0000842;3.88e-08;3!CL:0000784;5.44e-08;3!CL:0000219;6.96e-07;193!CL:0000988;7.12e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.55e-80,42;CL:0002057,1.55e-80,42;CL:0000766,4.48e-73,72;CL:0000473,8.83e-70,48;CL:0000234,8.83e-70,48;CL:0002009,1.64e-61,61;CL:0002194,3.49e-59,59;CL:0000576,3.49e-59,59;CL:0000040,3.49e-59,59;CL:0000559,3.49e-59,59;CL:0000557,1.44e-55,67;CL:0000839,2.10e-52,66;CL:0000763,6.14e-50,108;CL:0000049,6.14e-50,108;CL:0000738,1.13e-46,136;CL:0000037,1.38e-36,168;CL:0000988,2.12e-34,177;CL:0002087,9.14e-33,115;CL:0002032,1.78e-31,161;CL:0000837,1.78e-31,161;CL:0002031,1.19e-28,120;CL:0000094,3.62e-23,8;CL:0000081,1.04e-16,11;CL:0000767,2.34e-16,3;CL:0002393,6.38e-15,9;CL:0002397,6.38e-15,9;CL:0000134,7.43e-14,354;CL:0002320,1.88e-13,361;CL:0000219,4.92e-12,386;CL:0000771,8.51e-12,2;CL:0000034,1.22e-10,441;CL:0000048,2.69e-10,427;CL:0000723,4.68e-10,433;CL:0000226,3.68e-08,3;CL:0000842,3.68e-08,3;CL:0000784,4.72e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-60;42!CL:0000049;1.07e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.32e-55!80;UBERON:0002390!5.10e-53!102;UBERON:0003061!5.10e-53!102;UBERON:0001474!1.28e-50!86;UBERON:0002193!3.02e-47!112;UBERON:0004765!1.62e-41!101;UBERON:0001434!1.62e-41!101;UBERON:0002405!5.02e-37!115;UBERON:0003081!5.17e-21!216;UBERON:0002204!7.29e-21!167;UBERON:0002384!7.94e-17!375;UBERON:0000926!4.93e-07!448;UBERON:0004120!4.93e-07!448;UBERON:0006603!4.93e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.17e-48,76;UBERON:0001474,1.81e-44,82;UBERON:0002390,2.21e-42,98;UBERON:0003061,2.21e-42,98;UBERON:0004765,4.82e-40,90;UBERON:0002405,1.41e-38,93;UBERON:0002193,6.25e-38,108;UBERON:0001434,1.70e-35,100;UBERON:0002204,5.61e-19,167;UBERON:0003081,2.22e-17,203;UBERON:0002384,6.64e-13,371;UBERON:0000926,5.23e-09,315;UBERON:0004120,5.23e-09,315;UBERON:0006603,5.23e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,3.0706351847777,3.2511385896376,0,0,0,0,0,0.293600439334847,15.5118714388926,19.4528114046037,18.8799457522791,0,0,0,0.145398238779565,0,0.242584061187816,2.32429036905685,0.411167888021826,1.23882548358041,3.16461631554365,2.56160706529101,3.78371567821736,9.99762474136194,3.22742341791913,5.41705946377367,1.50593871634084,0.818718450173537,1.57306439111559,18.0589496498833,8.98601275813062,14.7047538933779,0,0.398927315243264,0.852449501065388,7.83564944297177,7.37600792098482,6.22822248995575,0.502497330513487,1.0429658368404,1.3031330682307,4.84319602106695,9.20694089968912,11.7091083353127,0.211255286311942,1.06302149982522,1.25795187305026,0.44931452458598,0.450530678524519,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.66943437013739,7.43593384014166,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.431255149719035,0.385029108839245,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,6.25571182373989,3.52200940751366,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,3.0706351847777,3.2511385896376,0,0,0,0,0,0.293600439334847,15.5118714388926,19.4528114046037,18.8799457522791,0,0,0,0.145398238779565,0,0.242584061187816,2.32429036905685,0.411167888021826,1.23882548358041,3.16461631554365,2.56160706529101,3.78371567821736,9.99762474136194,3.22742341791913,5.41705946377367,1.50593871634084,0.818718450173537,1.57306439111559,18.0589496498833,8.98601275813062,14.7047538933779,0,0.398927315243264,0.852449501065388,7.83564944297177,7.37600792098482,6.22822248995575,0.502497330513487,1.0429658368404,1.3031330682307,4.84319602106695,9.20694089968912,11.7091083353127,0.211255286311942,1.06302149982522,1.25795187305026,0.44931452458598,0.450530678524519,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.66943437013739,7.43593384014166,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.431255149719035,0.385029108839245,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,6.25571182373989,3.52200940751366,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000531850 | |short_description=p1@ENST00000531850 | ||
}} | }} |
Latest revision as of 18:37, 23 July 2015
Short description: | p1@ENST00000531850 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000531850_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -16bp_to_ENST00000531850_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.17e-48 | 76 |
bone element | 1.81e-44 | 82 |
hematopoietic system | 2.21e-42 | 98 |
blood island | 2.21e-42 | 98 |
skeletal element | 4.82e-40 | 90 |
immune system | 1.41e-38 | 93 |
hemolymphoid system | 6.25e-38 | 108 |
skeletal system | 1.70e-35 | 100 |
musculoskeletal system | 5.61e-19 | 167 |
lateral plate mesoderm | 2.22e-17 | 203 |
connective tissue | 6.64e-13 | 371 |
mesoderm | 5.23e-09 | 315 |
mesoderm-derived structure | 5.23e-09 | 315 |
presumptive mesoderm | 5.23e-09 | 315 |