FFCP PHASE1:Hg19::chr11:117075194..117075204,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-478bp_to_uc001pqq.1_5end | |association_with_transcript=-478bp_to_uc001pqq.1_5end | ||
|cluster_id=chr11:117075194..117075204,+ | |||
|description=CAGE_peak_5_at_uc001pqq.1_5end | |description=CAGE_peak_5_at_uc001pqq.1_5end | ||
|id=chr11:117075194..117075204,+ | |id=chr11:117075194..117075204,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.17e-13!180;CL:0000359!2.38e-10!32;CL:0000680!1.84e-08!57;CL:0000056!1.84e-08!57;CL:0000355!1.84e-08!57;CL:0000183!5.47e-08!59;CL:0000192!6.83e-08!42;CL:0000514!6.83e-08!42;CL:0000187!2.86e-07!54;CL:0002334!3.16e-07!12;CL:0000057!6.36e-07!75 | |ontology_enrichment_celltype=CL:0000055!1.17e-13!180;CL:0000359!2.38e-10!32;CL:0000680!1.84e-08!57;CL:0000056!1.84e-08!57;CL:0000355!1.84e-08!57;CL:0000183!5.47e-08!59;CL:0000192!6.83e-08!42;CL:0000514!6.83e-08!42;CL:0000187!2.86e-07!54;CL:0002334!3.16e-07!12;CL:0000057!6.36e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002615;4.88e-12;3!CL:0000359;1.55e-07;32!CL:0002595;2.12e-07;5!CL:0000136;2.64e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,8.10e-12,3;CL:0000136,8.55e-09,15;CL:0000359,5.15e-08,32;CL:0002595,2.50e-07,5;CL:0000197,8.96e-07,6;CL:0000098,8.96e-07,6;CL:0002167,8.96e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.74e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!6.47e-09!63;UBERON:0001015!6.47e-09!63;UBERON:0000383!6.47e-09!63;UBERON:0001134!6.32e-08!61;UBERON:0002036!6.32e-08!61;UBERON:0003082!6.32e-08!61;UBERON:0002100!8.98e-08!216;UBERON:0003688!2.61e-07!6;UBERON:0002358!2.61e-07!6;UBERON:0003684!2.61e-07!6;UBERON:0001178!2.61e-07!6;UBERON:0005256!7.96e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.02e-15;6!UBERON:0002358;1.02e-15;6!UBERON:0003684;1.02e-15;6!UBERON:0001178;1.02e-15;6!UBERON:0006947;5.73e-13;3!UBERON:0004054;5.73e-13;3!UBERON:0004457;2.15e-10;9!UBERON:0000042;2.15e-10;9!UBERON:0005904;7.82e-10;4!UBERON:0005406;4.14e-09;2!UBERON:0003834;2.12e-07;5!UBERON:0001533;2.12e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.30e-15,6;UBERON:0002358,3.30e-15,6;UBERON:0003684,3.30e-15,6;UBERON:0001178,3.30e-15,6;UBERON:0006947,6.39e-13,3;UBERON:0004054,6.39e-13,3;UBERON:0005904,8.48e-10,4;UBERON:0005406,2.72e-09,2;UBERON:0004457,1.75e-07,12;UBERON:0000042,1.75e-07,12;UBERON:0003834,2.50e-07,5;UBERON:0001533,2.50e-07,5;UBERON:0001637,3.32e-07,42;UBERON:0003509,3.32e-07,42;UBERON:0004572,3.32e-07,42 | |||
|phase1_expression=0.726713517082227,0.642301571672949,1.26858963686374,1.0007329835313,1.34088328328186,1.74467704820074,5.06599756336621,0,0,0,0.697801167972428,0,0,0,0.331397375727916,1.34465029290355,1.20538905604795,0,0.487932798790507,0,0.204000691244253,0.940364164434263,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0.570025487482497,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,0.361439152384566,0,0.434539556882471,0,0,0.378139268656271,0.665188192387692,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0,0,0,1.12135520028461,2.1349799145941,0.98667019366864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0.910161361938026,0.718618141816238,0,0,0,0,0.919463387397059,0.751190294532984,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0.309157587715317,0.257640540045629,0.930584281657949,0.506328996723799,0.292311015483596,0.252433774244115,0.184099797284599,0,0.710019185033229,0.10075209822764,0.508681776931463,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,3.17003474436719,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,2.08014873822732,0,0,0,0.428933980974443,0,0,0.325736184293735,0,0,0,0,0.699810938274399,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32753378449291,1.60586089917446,0.788512075169673,3.39710103478868,0.902838299183157,2.27407504055985,0,0,0.553107505625109,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0.744323423456331,0.61384789315225,0.841980283299221,0.384417447767103,1.02341449813341,1.12597744800525,4.45254199334973,0.154209693802656,0.177561725313127,0.164254312027618,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0,0,0.178064071293475,0,0.192190067365106,0,0,0,0,0,0,0.532306030317022,0,0.74129687641568,1.00187420719394,0,0.316379424718726,0.571890581771475,0,0.42793898803392,0,0.78494864019923,0.179872457583315,0,0,0.606547444719948,1.58510321173008,0,0,0.487426979262569,1.05650146756755,0,0,0,0,1.32687795048244,1.31535265576129,0,0,1.21746226177622,0.30982349809975,0.563391205064483,0.143411352204052,0.392996164052485,2.1400263088875,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39097585901284,0.276283915531148,0,0,0,0.933118762985422,0,0,0,1.7755813014648,0,3.33410970433911,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615602068030377,0,0,0.0897576444097721,0.108647371922008,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.353830258013357,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,2.76209081994573,1.20990716048664,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0,0,0,0,0,1.22308667769421,0,0,0,0,1.26085721434945,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.558564802544508,1.3749625440701,0,0,0,0.223171457441873,0.134366944973453,5.40449825313605,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,1.04349012362347,0.450772826991655,0.761610424337591,0.813741466409323,0,0,0,0.796191777397232,0,0,1.34699795506368,1.26184898228651,0,0,0,0,0,0.244736704506468,0,0.617602894321944,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,1.90802610392051,0,0,1.76337971845342,1.2249819094128,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0.381382095467167,0,0,0.300841313397029,0,0,0,0,0.147856086217045,0,0,0,0,0,0,1.98484471355718,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.863424021355654,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,5.08064460229115,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,1.22574160876953,0,0,0,0,1.0195626881269,0.375935671919414,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0,0,0.126166424835079,0,0,0.203977659483963,0,0,0,0.378893491091197,0.267964130156178,0,0,0,0,0,0,0,0.12729431655633,0.202117188958219,0.217716747896961,0,0,0.21516661617802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| ||
|short_description=p5@uc001pqq.1 | |short_description=p5@uc001pqq.1 | ||
}} | }} |
Latest revision as of 18:34, 23 July 2015
Short description: | p5@uc001pqq.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_uc001pqq.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -478bp_to_uc001pqq.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 8.10e-12 | 3 |
fat cell | 8.55e-09 | 15 |
vascular associated smooth muscle cell | 5.15e-08 | 32 |
smooth muscle cell of the subclavian artery | 2.50e-07 | 5 |
receptor cell | 8.96e-07 | 6 |
sensory epithelial cell | 8.96e-07 | 6 |
olfactory epithelial cell | 8.96e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.30e-15 | 6 |
peritoneum | 3.30e-15 | 6 |
abdominal cavity | 3.30e-15 | 6 |
visceral peritoneum | 3.30e-15 | 6 |
male genital duct | 6.39e-13 | 3 |
internal male genitalia | 6.39e-13 | 3 |
duct of male reproductive system | 8.48e-10 | 4 |
perirenal fat | 2.72e-09 | 2 |
cavity lining | 1.75e-07 | 12 |
serous membrane | 1.75e-07 | 12 |
thoracic segment blood vessel | 2.50e-07 | 5 |
subclavian artery | 2.50e-07 | 5 |
artery | 3.32e-07 | 42 |
arterial blood vessel | 3.32e-07 | 42 |
arterial system | 3.32e-07 | 42 |