FFCP PHASE1:Hg19::chr11:117074035..117074046,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:117074035..117074046,+ | |||
|coexpression_cluster_id=C493 | |||
|description=CAGE_peak_at_chr11:117074035..117074046,+ | |description=CAGE_peak_at_chr11:117074035..117074046,+ | ||
|id=chr11:117074035..117074046,+ | |id=chr11:117074035..117074046,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.28e-21!180;CL:0000192!6.93e-15!42;CL:0000514!6.93e-15!42;CL:0000359!1.04e-14!32;CL:0000680!2.36e-14!57;CL:0000056!2.36e-14!57;CL:0000355!2.36e-14!57;CL:0000183!4.55e-13!59;CL:0000187!6.07e-13!54;CL:0000393!1.36e-11!60;CL:0000211!1.36e-11!60;CL:0000057!4.14e-09!75 | |ontology_enrichment_celltype=CL:0000055!9.28e-21!180;CL:0000192!6.93e-15!42;CL:0000514!6.93e-15!42;CL:0000359!1.04e-14!32;CL:0000680!2.36e-14!57;CL:0000056!2.36e-14!57;CL:0000355!2.36e-14!57;CL:0000183!4.55e-13!59;CL:0000187!6.07e-13!54;CL:0000393!1.36e-11!60;CL:0000211!1.36e-11!60;CL:0000057!4.14e-09!75 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.49e-15;32!CL:0000192;4.68e-09;43!CL:0002594;8.73e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.03e-16,32;CL:0000192,1.62e-12,43;CL:0000514,1.62e-12,43;CL:0000680,2.66e-10,58;CL:0000056,2.66e-10,58;CL:0000355,2.66e-10,58;CL:0000187,2.62e-09,55;CL:0000057,9.37e-09,76;CL:0000393,8.50e-08,61;CL:0000211,8.50e-08,61;CL:0000136,1.15e-07,15;CL:0002594,6.39e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;4.68e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!2.29e-08!14 | |ontology_enrichment_disease=DOID:2394!2.29e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!3.87e-14!63;UBERON:0001015!3.87e-14!63;UBERON:0000383!3.87e-14!63;UBERON:0001134!2.85e-13!61;UBERON:0002036!2.85e-13!61;UBERON:0003082!2.85e-13!61;UBERON:0000914!3.18e-13!83;UBERON:0002329!3.18e-13!83;UBERON:0003077!3.18e-13!83;UBERON:0003059!3.18e-13!83;UBERON:0007282!3.18e-13!83;UBERON:0009618!3.18e-13!83;UBERON:0007285!3.18e-13!83;UBERON:0005256!1.46e-12!143;UBERON:0004290!4.12e-11!70;UBERON:0002100!3.43e-10!216;UBERON:0004872!5.17e-10!84;UBERON:0001637!6.83e-10!42;UBERON:0003509!6.83e-10!42;UBERON:0004572!6.83e-10!42;UBERON:0000486!1.13e-09!82;UBERON:0003914!1.84e-09!118;UBERON:0004573!3.11e-09!33;UBERON:0004571!3.11e-09!33;UBERON:0001981!5.23e-08!60;UBERON:0007500!5.23e-08!60;UBERON:0004537!5.23e-08!60;UBERON:0006965!5.23e-08!60;UBERON:0002049!1.04e-07!79;UBERON:0007798!1.04e-07!79;UBERON:0001009!4.98e-07!113;UBERON:0003104!7.91e-07!238;UBERON:0009142!7.91e-07!238;UBERON:0004535!8.01e-07!110 | |ontology_enrichment_uberon=UBERON:0002385!3.87e-14!63;UBERON:0001015!3.87e-14!63;UBERON:0000383!3.87e-14!63;UBERON:0001134!2.85e-13!61;UBERON:0002036!2.85e-13!61;UBERON:0003082!2.85e-13!61;UBERON:0000914!3.18e-13!83;UBERON:0002329!3.18e-13!83;UBERON:0003077!3.18e-13!83;UBERON:0003059!3.18e-13!83;UBERON:0007282!3.18e-13!83;UBERON:0009618!3.18e-13!83;UBERON:0007285!3.18e-13!83;UBERON:0005256!1.46e-12!143;UBERON:0004290!4.12e-11!70;UBERON:0002100!3.43e-10!216;UBERON:0004872!5.17e-10!84;UBERON:0001637!6.83e-10!42;UBERON:0003509!6.83e-10!42;UBERON:0004572!6.83e-10!42;UBERON:0000486!1.13e-09!82;UBERON:0003914!1.84e-09!118;UBERON:0004573!3.11e-09!33;UBERON:0004571!3.11e-09!33;UBERON:0001981!5.23e-08!60;UBERON:0007500!5.23e-08!60;UBERON:0004537!5.23e-08!60;UBERON:0006965!5.23e-08!60;UBERON:0002049!1.04e-07!79;UBERON:0007798!1.04e-07!79;UBERON:0001009!4.98e-07!113;UBERON:0003104!7.91e-07!238;UBERON:0009142!7.91e-07!238;UBERON:0004535!8.01e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.41e-09;33!UBERON:0004571;1.41e-09;33!UBERON:0001637;1.17e-07;42!UBERON:0003509;1.17e-07;42!UBERON:0004572;1.17e-07;42!UBERON:0003688;5.33e-07;6!UBERON:0002358;5.33e-07;6!UBERON:0003684;5.33e-07;6!UBERON:0001178;5.33e-07;6!UBERON:0001310;8.73e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,7.27e-12,42;UBERON:0003509,7.27e-12,42;UBERON:0004572,7.27e-12,42;UBERON:0004573,2.25e-10,33;UBERON:0004571,2.25e-10,33;UBERON:0002385,9.62e-10,64;UBERON:0001015,9.62e-10,64;UBERON:0000383,9.62e-10,64;UBERON:0001134,3.35e-09,62;UBERON:0002036,3.35e-09,62;UBERON:0003082,3.35e-09,62;UBERON:0007524,1.34e-08,73;UBERON:0007503,2.31e-08,78;UBERON:0007500,2.63e-08,59;UBERON:0001981,2.63e-08,59;UBERON:0004537,2.63e-08,59;UBERON:0006965,2.63e-08,59;UBERON:0002329,4.07e-08,71;UBERON:0003059,4.07e-08,71;UBERON:0007282,4.07e-08,71;UBERON:0004290,4.07e-08,71;UBERON:0009618,4.07e-08,71;UBERON:0003077,6.52e-08,72;UBERON:0007285,6.52e-08,72;UBERON:0002049,1.26e-07,78;UBERON:0007798,1.26e-07,78;UBERON:0005256,1.70e-07,122;UBERON:0004872,2.55e-07,83;UBERON:0003104,2.63e-07,160;UBERON:0009142,2.63e-07,160;UBERON:0003688,5.59e-07,6;UBERON:0002358,5.59e-07,6;UBERON:0003684,5.59e-07,6;UBERON:0001178,5.59e-07,6;UBERON:0001310,6.39e-07,4 | |||
|phase1_expression=1.09007027562334,5.99481466894753,1.40954404095971,11.0080628188443,7.15137751083661,14.8297549097063,12.6649939084155,0,0.261185628199839,0.982935746006035,5.58240934377942,0.218441372130172,1.31883489114227,0.123766352960047,0,6.72325146451775,4.21886169616784,4.38186054232424,3.90346239032406,0.246242116153576,1.02000345622126,0.626909442956176,0.286235987131057,0.547497700291537,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,0.361439152384566,1.50401373190767,0.579386075843295,0,0.486634870302636,0.850813354476611,3.32594096193846,1.75669571386252,0.458426764241994,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,3.47880366186723,2.15271869829786,0.662045904066094,0,1.06400514659507,3.92474320099615,1.06748995729705,2.71334303258876,0,0.404132016209064,0.490385709340376,0.605429710579726,0,0,0,0,0,0,0,0.140450806702248,0,0,0,2.37600571456411,3.4617370098998,0,0.718618141816238,0,0,0,2.19488810440419,7.66219489497549,3.00476117813194,0.567160915800105,0.89694817844431,1.2813443329114,0.635795703478686,0.300091096084402,1.13357782162283,1.28820270022815,1.48893485065272,0.337552664482532,2.14361411354637,0.504867548488229,0.460249493211497,0.646584227275248,1.42003837006646,2.41805035746337,1.01736355386293,0,0,0,0.121973706129595,0,0.232387885739037,0.310983165046111,0.252320850875628,0,0,5.14592750554308,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,2.88662684050547,0.115930404975077,0.821860859650752,0,0,0,0,0,0,0,0,0.93733833986777,0.839910640994298,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.51336800074665,1.29271715757778,3.57656445851882,0,3.19125739901845,4.16029747645464,0,0,0,0.57191197463259,0,0,0,0.710783897485092,0.791951872933429,0,1.74306691720059,1.49959486773086,0,0,0,2.63587341040741,4.59447743336456,0,1.73737568001095,0.821905290201534,1.07436577943937,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,1.00034104211935,0,5.8231841228626,9.63516539504674,2.20783381047509,3.39710103478868,0.601892199455438,0,3.10419213877515,0,3.50301420229236,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0.30239029332968,0.744323423456331,1.53461973288062,7.85848264412606,0,2.04682899626681,2.73451665944133,2.96836132889982,0.308419387605311,1.42049380250502,0.246381468041427,0.519254429183621,1.16210378459959,0,0.601519410909855,0,0,0.546273504020151,0.524497659837696,0.451199612907412,0.231046011313244,0,1.46139224653261,0.211103257785751,0,0,0.215915916102139,0,0.541892875087706,1.50506932156456,0,0.831076008928724,0.447749509444357,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,1.6068392984416,0,0,0,0.275673144969061,0.214840489736547,0.435050081742686,0.170453254832202,0.267096106940212,0.165284915360978,0.192190067365106,0,0,5.11330104227014,1.25924938732256,0,0,0.532306030317022,0,0.55597265731176,2.14687330112987,0.372158369359667,3.16379424718726,1.5250415513906,0.511795582622668,0,0.318203247925937,3.92474320099615,0,1.37268514868027,0.471249609382746,0.202182481573316,4.75530963519025,2.10629228119491,0,1.46228093778771,6.33900880540533,0.545999645631943,0.141405431953713,0,0.551365343546124,3.98063385144732,2.19225442626881,1.15755106853338,0,1.62328301570163,3.717881977197,3.09865162785466,0.286822704408103,0.88424136911809,2.49669736036875,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,1.68471475667626,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18420775327246,0.552567831062295,0,0,0,6.84287092855976,0,0,0,3.05794557474494,0,1.11136990144637,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,1.92375646259493,0.227884111694002,0,0,0,0,1.37396390102793,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,1.99052386215701,1.23840590304675,3.66618086960175,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,2.36750641709634,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,1.84279131327997,0,0.451961481561065,0,0,0,0,0.160317640503067,1.70762395791482,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0.859530882839914,0,1.11712960508902,1.14580212005842,0,0,0.429226048136571,0.446342914883745,0.0671834724867263,4.68389848605125,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.2249738915515,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0.5085370753095,2.71499800876856,3.45688596480507,4.89881040164114,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0.320362237703084,0,0,0,0,0,0,0,0,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| ||
|short_description=p@chr11:117074035..117074046,+ | |short_description=p@chr11:117074035..117074046,+ | ||
}} | }} |
Latest revision as of 18:33, 23 July 2015
Short description: | p@chr11:117074035..117074046, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:117074035..117074046, + |
Coexpression cluster: | C493_Adipocyte_basal_Mesenchymal_Smooth_mesenchymal_Aortic_Multipotent |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.03e-16 | 32 |
smooth muscle cell | 1.62e-12 | 43 |
smooth muscle myoblast | 1.62e-12 | 43 |
muscle precursor cell | 2.66e-10 | 58 |
myoblast | 2.66e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.66e-10 | 58 |
muscle cell | 2.62e-09 | 55 |
fibroblast | 9.37e-09 | 76 |
electrically responsive cell | 8.50e-08 | 61 |
electrically active cell | 8.50e-08 | 61 |
fat cell | 1.15e-07 | 15 |
smooth muscle cell of the umbilical artery | 6.39e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
artery | 7.27e-12 | 42 |
arterial blood vessel | 7.27e-12 | 42 |
arterial system | 7.27e-12 | 42 |
systemic artery | 2.25e-10 | 33 |
systemic arterial system | 2.25e-10 | 33 |
muscle tissue | 9.62e-10 | 64 |
musculature | 9.62e-10 | 64 |
musculature of body | 9.62e-10 | 64 |
skeletal muscle tissue | 3.35e-09 | 62 |
striated muscle tissue | 3.35e-09 | 62 |
myotome | 3.35e-09 | 62 |
dense mesenchyme tissue | 1.34e-08 | 73 |
epithelial vesicle | 2.31e-08 | 78 |
epithelial tube open at both ends | 2.63e-08 | 59 |
blood vessel | 2.63e-08 | 59 |
blood vasculature | 2.63e-08 | 59 |
vascular cord | 2.63e-08 | 59 |
somite | 4.07e-08 | 71 |
presomitic mesoderm | 4.07e-08 | 71 |
presumptive segmental plate | 4.07e-08 | 71 |
dermomyotome | 4.07e-08 | 71 |
trunk paraxial mesoderm | 4.07e-08 | 71 |
paraxial mesoderm | 6.52e-08 | 72 |
presumptive paraxial mesoderm | 6.52e-08 | 72 |
vasculature | 1.26e-07 | 78 |
vascular system | 1.26e-07 | 78 |
trunk mesenchyme | 1.70e-07 | 122 |
splanchnic layer of lateral plate mesoderm | 2.55e-07 | 83 |
mesenchyme | 2.63e-07 | 160 |
entire embryonic mesenchyme | 2.63e-07 | 160 |
omentum | 5.59e-07 | 6 |
peritoneum | 5.59e-07 | 6 |
abdominal cavity | 5.59e-07 | 6 |
visceral peritoneum | 5.59e-07 | 6 |
umbilical artery | 6.39e-07 | 4 |