FFCP PHASE1:Hg19::chr11:117074035..117074046,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:117074035..117074046,+ | |||
|coexpression_cluster_id=C493 | |||
|description=CAGE_peak_at_chr11:117074035..117074046,+ | |description=CAGE_peak_at_chr11:117074035..117074046,+ | ||
|id=chr11:117074035..117074046,+ | |id=chr11:117074035..117074046,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.28e-21!180;CL:0000192!6.93e-15!42;CL:0000514!6.93e-15!42;CL:0000359!1.04e-14!32;CL:0000680!2.36e-14!57;CL:0000056!2.36e-14!57;CL:0000355!2.36e-14!57;CL:0000183!4.55e-13!59;CL:0000187!6.07e-13!54;CL:0000393!1.36e-11!60;CL:0000211!1.36e-11!60;CL:0000057!4.14e-09!75 | |ontology_enrichment_celltype=CL:0000055!9.28e-21!180;CL:0000192!6.93e-15!42;CL:0000514!6.93e-15!42;CL:0000359!1.04e-14!32;CL:0000680!2.36e-14!57;CL:0000056!2.36e-14!57;CL:0000355!2.36e-14!57;CL:0000183!4.55e-13!59;CL:0000187!6.07e-13!54;CL:0000393!1.36e-11!60;CL:0000211!1.36e-11!60;CL:0000057!4.14e-09!75 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.49e-15;32!CL:0000192;4.68e-09;43!CL:0002594;8.73e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.03e-16,32;CL:0000192,1.62e-12,43;CL:0000514,1.62e-12,43;CL:0000680,2.66e-10,58;CL:0000056,2.66e-10,58;CL:0000355,2.66e-10,58;CL:0000187,2.62e-09,55;CL:0000057,9.37e-09,76;CL:0000393,8.50e-08,61;CL:0000211,8.50e-08,61;CL:0000136,1.15e-07,15;CL:0002594,6.39e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;4.68e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!2.29e-08!14 | |ontology_enrichment_disease=DOID:2394!2.29e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!3.87e-14!63;UBERON:0001015!3.87e-14!63;UBERON:0000383!3.87e-14!63;UBERON:0001134!2.85e-13!61;UBERON:0002036!2.85e-13!61;UBERON:0003082!2.85e-13!61;UBERON:0000914!3.18e-13!83;UBERON:0002329!3.18e-13!83;UBERON:0003077!3.18e-13!83;UBERON:0003059!3.18e-13!83;UBERON:0007282!3.18e-13!83;UBERON:0009618!3.18e-13!83;UBERON:0007285!3.18e-13!83;UBERON:0005256!1.46e-12!143;UBERON:0004290!4.12e-11!70;UBERON:0002100!3.43e-10!216;UBERON:0004872!5.17e-10!84;UBERON:0001637!6.83e-10!42;UBERON:0003509!6.83e-10!42;UBERON:0004572!6.83e-10!42;UBERON:0000486!1.13e-09!82;UBERON:0003914!1.84e-09!118;UBERON:0004573!3.11e-09!33;UBERON:0004571!3.11e-09!33;UBERON:0001981!5.23e-08!60;UBERON:0007500!5.23e-08!60;UBERON:0004537!5.23e-08!60;UBERON:0006965!5.23e-08!60;UBERON:0002049!1.04e-07!79;UBERON:0007798!1.04e-07!79;UBERON:0001009!4.98e-07!113;UBERON:0003104!7.91e-07!238;UBERON:0009142!7.91e-07!238;UBERON:0004535!8.01e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.41e-09;33!UBERON:0004571;1.41e-09;33!UBERON:0001637;1.17e-07;42!UBERON:0003509;1.17e-07;42!UBERON:0004572;1.17e-07;42!UBERON:0003688;5.33e-07;6!UBERON:0002358;5.33e-07;6!UBERON:0003684;5.33e-07;6!UBERON:0001178;5.33e-07;6!UBERON:0001310;8.73e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,7.27e-12,42;UBERON:0003509,7.27e-12,42;UBERON:0004572,7.27e-12,42;UBERON:0004573,2.25e-10,33;UBERON:0004571,2.25e-10,33;UBERON:0002385,9.62e-10,64;UBERON:0001015,9.62e-10,64;UBERON:0000383,9.62e-10,64;UBERON:0001134,3.35e-09,62;UBERON:0002036,3.35e-09,62;UBERON:0003082,3.35e-09,62;UBERON:0007524,1.34e-08,73;UBERON:0007503,2.31e-08,78;UBERON:0007500,2.63e-08,59;UBERON:0001981,2.63e-08,59;UBERON:0004537,2.63e-08,59;UBERON:0006965,2.63e-08,59;UBERON:0002329,4.07e-08,71;UBERON:0003059,4.07e-08,71;UBERON:0007282,4.07e-08,71;UBERON:0004290,4.07e-08,71;UBERON:0009618,4.07e-08,71;UBERON:0003077,6.52e-08,72;UBERON:0007285,6.52e-08,72;UBERON:0002049,1.26e-07,78;UBERON:0007798,1.26e-07,78;UBERON:0005256,1.70e-07,122;UBERON:0004872,2.55e-07,83;UBERON:0003104,2.63e-07,160;UBERON:0009142,2.63e-07,160;UBERON:0003688,5.59e-07,6;UBERON:0002358,5.59e-07,6;UBERON:0003684,5.59e-07,6;UBERON:0001178,5.59e-07,6;UBERON:0001310,6.39e-07,4 | |||
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| ||
|short_description=p@chr11:117074035..117074046,+ | |short_description=p@chr11:117074035..117074046,+ | ||
}} | }} |
Latest revision as of 18:33, 23 July 2015
Short description: | p@chr11:117074035..117074046, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:117074035..117074046, + |
Coexpression cluster: | C493_Adipocyte_basal_Mesenchymal_Smooth_mesenchymal_Aortic_Multipotent |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.03e-16 | 32 |
smooth muscle cell | 1.62e-12 | 43 |
smooth muscle myoblast | 1.62e-12 | 43 |
muscle precursor cell | 2.66e-10 | 58 |
myoblast | 2.66e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.66e-10 | 58 |
muscle cell | 2.62e-09 | 55 |
fibroblast | 9.37e-09 | 76 |
electrically responsive cell | 8.50e-08 | 61 |
electrically active cell | 8.50e-08 | 61 |
fat cell | 1.15e-07 | 15 |
smooth muscle cell of the umbilical artery | 6.39e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
artery | 7.27e-12 | 42 |
arterial blood vessel | 7.27e-12 | 42 |
arterial system | 7.27e-12 | 42 |
systemic artery | 2.25e-10 | 33 |
systemic arterial system | 2.25e-10 | 33 |
muscle tissue | 9.62e-10 | 64 |
musculature | 9.62e-10 | 64 |
musculature of body | 9.62e-10 | 64 |
skeletal muscle tissue | 3.35e-09 | 62 |
striated muscle tissue | 3.35e-09 | 62 |
myotome | 3.35e-09 | 62 |
dense mesenchyme tissue | 1.34e-08 | 73 |
epithelial vesicle | 2.31e-08 | 78 |
epithelial tube open at both ends | 2.63e-08 | 59 |
blood vessel | 2.63e-08 | 59 |
blood vasculature | 2.63e-08 | 59 |
vascular cord | 2.63e-08 | 59 |
somite | 4.07e-08 | 71 |
presomitic mesoderm | 4.07e-08 | 71 |
presumptive segmental plate | 4.07e-08 | 71 |
dermomyotome | 4.07e-08 | 71 |
trunk paraxial mesoderm | 4.07e-08 | 71 |
paraxial mesoderm | 6.52e-08 | 72 |
presumptive paraxial mesoderm | 6.52e-08 | 72 |
vasculature | 1.26e-07 | 78 |
vascular system | 1.26e-07 | 78 |
trunk mesenchyme | 1.70e-07 | 122 |
splanchnic layer of lateral plate mesoderm | 2.55e-07 | 83 |
mesenchyme | 2.63e-07 | 160 |
entire embryonic mesenchyme | 2.63e-07 | 160 |
omentum | 5.59e-07 | 6 |
peritoneum | 5.59e-07 | 6 |
abdominal cavity | 5.59e-07 | 6 |
visceral peritoneum | 5.59e-07 | 6 |
umbilical artery | 6.39e-07 | 4 |