FFCP PHASE1:Hg19::chr11:11239563..11239568,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:11239563..11239568,+ | |||
|coexpression_cluster_id=C191 | |||
|description=CAGE_peak_at_chr11:11239563..11239568,+ | |||
|id=chr11:11239563..11239568,+ | |||
|ontology_enrichment_celltype=CL:0002274!2.60e-20!5;CL:0000457!2.60e-20!5;CL:0002191!2.60e-20!5;CL:0000097!2.60e-20!5;CL:0000831!2.60e-20!5;CL:0002028!2.60e-20!5;CL:0000163!2.29e-11!9;CL:0002127!1.22e-07!1;CL:0000914!1.22e-07!1;CL:0000911!1.22e-07!1;CL:0000814!1.22e-07!1;CL:0002042!1.22e-07!1;CL:0002039!1.22e-07!1;CL:0002040!1.22e-07!1;CL:0002041!1.22e-07!1;CL:0000946!2.31e-07!1;CL:0000786!2.31e-07!1;CL:0000980!2.31e-07!1;CL:0002327!5.06e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000047;7.14e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.80e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.99e-50;1!UBERON:0003056;9.45e-18;3!UBERON:0005062;1.13e-13;4!UBERON:0007284;1.13e-13;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002134!4.57e-08!1;UBERON:0005208!4.57e-08!1;UBERON:0005946!4.57e-08!1;UBERON:0005965!4.57e-08!1;UBERON:0002078!4.57e-08!1;UBERON:0000941!4.89e-08!1;UBERON:0004904!4.89e-08!1;UBERON:0002464!4.89e-08!1;UBERON:0001021!4.89e-08!1;UBERON:0001785!4.89e-08!1;UBERON:0001911!5.06e-07!4;UBERON:0005333!5.06e-07!4;UBERON:0008425!5.06e-07!4;UBERON:0005311!5.06e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;3.99e-50;1!UBERON:0000941;3.99e-50;1!UBERON:0001785;3.99e-50;1!UBERON:0002464;3.99e-50;1!UBERON:0004904;3.99e-50;1!UBERON:0001021;3.99e-50;1!UBERON:0005208;3.99e-50;1!UBERON:0004145;3.99e-50;1!UBERON:0005946;3.99e-50;1!UBERON:0005965;3.99e-50;1!UBERON:0002078;3.99e-50;1!UBERON:0003714;7.14e-26;2!UBERON:0005162;7.14e-26;2!UBERON:0000122;7.14e-26;2!UBERON:0002081;7.14e-26;2!UBERON:0002133;7.14e-26;2!UBERON:0003978;9.45e-18;3!UBERON:0004151;9.45e-18;3!UBERON:0000946;9.45e-18;3!UBERON:0000010;8.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.42e-50,1;UBERON:0005208,2.42e-50,1;UBERON:0005946,2.42e-50,1;UBERON:0005965,2.42e-50,1;UBERON:0002078,2.42e-50,1;UBERON:0000941,3.99e-50,1;UBERON:0001785,3.99e-50,1;UBERON:0002464,3.99e-50,1;UBERON:0004904,3.99e-50,1;UBERON:0001021,3.99e-50,1;UBERON:0003902,3.99e-50,1;UBERON:0005425,3.99e-50,1;UBERON:0002081,5.56e-26,2;UBERON:0002133,5.56e-26,2;UBERON:0010227,5.56e-26,2;UBERON:0003714,7.14e-26,2;UBERON:0005162,7.14e-26,2;UBERON:0000122,7.14e-26,2;UBERON:0003978,8.00e-18,3;UBERON:0009751,8.00e-18,3;UBERON:0004151,8.00e-18,3;UBERON:0000946,8.00e-18,3;UBERON:0002523,8.00e-18,3;UBERON:0005983,8.00e-18,3;UBERON:0004145,8.00e-18,3;UBERON:0002165,8.00e-18,3;UBERON:0002062,8.00e-18,3;UBERON:0007280,8.00e-18,3;UBERON:0001781,1.13e-13,4;UBERON:0000966,1.44e-09,6;UBERON:0005388,1.44e-09,6;UBERON:0001802,1.44e-09,6;UBERON:0004797,2.03e-08,7;UBERON:0000010,8.37e-07,8 | |||
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|short_description=p@chr11:11239563..11239568,+ | |||
}} | }} |
Latest revision as of 18:15, 23 July 2015
Short description: | p@chr11:11239563..11239568, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:11239563..11239568, + |
Coexpression cluster: | C191_leiomyoblastoma_Mast_parietal_acute_bone_neuroepithelioma_embryonic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.42e-50 | 1 |
right atrium valve | 2.42e-50 | 1 |
outflow tract of atrium | 2.42e-50 | 1 |
outflow part of right atrium | 2.42e-50 | 1 |
right cardiac atrium | 2.42e-50 | 1 |
cranial nerve II | 3.99e-50 | 1 |
cranial nerve | 3.99e-50 | 1 |
nerve trunk | 3.99e-50 | 1 |
nerve connecting eye with brain | 3.99e-50 | 1 |
nerve | 3.99e-50 | 1 |
retinal neural layer | 3.99e-50 | 1 |
presumptive neural retina | 3.99e-50 | 1 |
cardiac atrium | 5.56e-26 | 2 |
atrioventricular valve | 5.56e-26 | 2 |
future cardiac atrium | 5.56e-26 | 2 |
neural tissue | 7.14e-26 | 2 |
multi cell component structure | 7.14e-26 | 2 |
neuron projection bundle | 7.14e-26 | 2 |
valve | 8.00e-18 | 3 |
cardiac mesenchyme | 8.00e-18 | 3 |
cardiac chamber | 8.00e-18 | 3 |
cardial valve | 8.00e-18 | 3 |
tunica intima | 8.00e-18 | 3 |
heart layer | 8.00e-18 | 3 |
outflow tract | 8.00e-18 | 3 |
endocardium | 8.00e-18 | 3 |
endocardial cushion | 8.00e-18 | 3 |
presumptive endocardium | 8.00e-18 | 3 |
layer of retina | 1.13e-13 | 4 |
retina | 1.44e-09 | 6 |
photoreceptor array | 1.44e-09 | 6 |
posterior segment of eyeball | 1.44e-09 | 6 |
blood vessel layer | 2.03e-08 | 7 |
peripheral nervous system | 8.37e-07 | 8 |