FFCP PHASE1:Hg19::chr11:111225030..111225046,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:111225030..111225046,- | |||
|coexpression_cluster_id=C442 | |coexpression_cluster_id=C442 | ||
|description=CAGE_peak_at_chr11:111225030..111225046,- | |description=CAGE_peak_at_chr11:111225030..111225046,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!5.81e-56!24;CL:0000826!5.81e-56!24;CL:0000542!5.72e-28!53;CL:0000051!5.72e-28!53;CL:0000838!1.05e-25!52;CL:0000236!2.18e-21!14;CL:0000817!4.83e-13!3;CL:0002087!1.52e-10!119;CL:0000785!1.93e-09!2;CL:0000955!1.93e-09!2;CL:0000818!1.93e-09!2;CL:0000954!1.93e-09!2;CL:0000816!1.93e-09!2;CL:0000738!3.33e-08!140;CL:0002031!7.90e-08!124 | |ontology_enrichment_celltype=CL:0000945!5.81e-56!24;CL:0000826!5.81e-56!24;CL:0000542!5.72e-28!53;CL:0000051!5.72e-28!53;CL:0000838!1.05e-25!52;CL:0000236!2.18e-21!14;CL:0000817!4.83e-13!3;CL:0002087!1.52e-10!119;CL:0000785!1.93e-09!2;CL:0000955!1.93e-09!2;CL:0000818!1.93e-09!2;CL:0000954!1.93e-09!2;CL:0000816!1.93e-09!2;CL:0000738!3.33e-08!140;CL:0002031!7.90e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.93e-91;24!CL:0000542;1.57e-23;53!CL:0000236;1.58e-12;13!CL:0000785;8.62e-12;1!CL:0000819;8.62e-12;1!CL:0000946;1.12e-11;1!CL:0000786;1.12e-11;1!CL:0000817;4.44e-11;1!CL:0002087;6.65e-09;104 | |ontology_enrichment_celltype_v019=CL:0000945;5.93e-91;24!CL:0000542;1.57e-23;53!CL:0000236;1.58e-12;13!CL:0000785;8.62e-12;1!CL:0000819;8.62e-12;1!CL:0000946;1.12e-11;1!CL:0000786;1.12e-11;1!CL:0000817;4.44e-11;1!CL:0002087;6.65e-09;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.07e-91,24;CL:0000826,4.07e-91,24;CL:0000542,7.91e-46,53;CL:0000051,7.91e-46,53;CL:0000838,5.89e-41,52;CL:0000817,6.66e-31,3;CL:0000785,1.12e-21,2;CL:0000955,1.12e-21,2;CL:0000818,1.12e-21,2;CL:0000954,1.12e-21,2;CL:0000816,1.12e-21,2;CL:0002087,1.09e-19,115;CL:0000236,7.86e-18,14;CL:0002031,2.46e-16,120;CL:0000738,2.65e-16,136;CL:0002032,2.08e-13,161;CL:0000837,2.08e-13,161;CL:0000037,9.44e-13,168;CL:0000988,5.57e-12,177;CL:0000819,8.62e-12,1;CL:0000946,1.18e-11,1;CL:0000786,1.18e-11,1;CL:0000980,1.18e-11,1 | |||
|ontology_enrichment_development_v019=CL:0000051;1.57e-23;53!CL:0000954;1.07e-21;2!UBERON:0001045;4.44e-11;1 | |ontology_enrichment_development_v019=CL:0000051;1.57e-23;53!CL:0000954;1.07e-21;2!UBERON:0001045;4.44e-11;1 | ||
|ontology_enrichment_disease=DOID:0060058!1.99e-14!10 | |ontology_enrichment_disease=DOID:0060058!1.99e-14!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.03e-36;10!DOID:0060073;8.62e-12;1!DOID:8675;8.62e-12;1!DOID:630;1.97e-11;1!DOID:0050177;1.97e-11;1!DOID:4960;1.97e-11;1!DOID:0070004;1.97e-11;1!DOID:12603;1.97e-11;1!DOID:0050427;1.97e-11;1!DOID:2355;1.97e-11;1!DOID:2531;7.52e-08;51!DOID:0060083;7.52e-08;51 | |ontology_enrichment_disease_v019=DOID:0060058;3.03e-36;10!DOID:0060073;8.62e-12;1!DOID:8675;8.62e-12;1!DOID:630;1.97e-11;1!DOID:0050177;1.97e-11;1!DOID:4960;1.97e-11;1!DOID:0070004;1.97e-11;1!DOID:12603;1.97e-11;1!DOID:0050427;1.97e-11;1!DOID:2355;1.97e-11;1!DOID:2531;7.52e-08;51!DOID:0060083;7.52e-08;51 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.12e-36,10;DOID:2531,8.35e-15,51;DOID:0060083,8.35e-15,51;DOID:0060073,8.62e-12,1;DOID:8675,8.62e-12,1;DOID:630,1.45e-11,1;DOID:0050177,1.45e-11,1;DOID:0050427,1.45e-11,1;DOID:4960,2.42e-11,1;DOID:0070004,2.42e-11,1;DOID:12603,2.68e-11,1;DOID:2355,2.96e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.17e-08!7 | |ontology_enrichment_uberon=UBERON:0004177!1.17e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;4.44e-11;1!UBERON:0001153;4.44e-11;1!UBERON:0009854;4.44e-11;1 | |ontology_enrichment_uberon_v019=UBERON:0001154;4.44e-11;1!UBERON:0001153;4.44e-11;1!UBERON:0009854;4.44e-11;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.43e-11,1;UBERON:0001153,5.43e-11,1;UBERON:0001045,5.43e-11,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91033514369878,1.23150884174919,1.57421562627358,0,0,0,0,0,0,3.79589282843478,2.41687695228617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.800791974072025,0.574752439954483,0.661044872784862,0,0,1.76171156811282,2.29363936875137,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.822724546172388,0,0,0,0,0,0,2.22963810150862,1.15415370381156,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,2.95403533106567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,8.39292030392064,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0,0,2.2015066337104,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,2.37133958277533,7.91651889475823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2387947355906,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.68748760178494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603851374266694,0,0,0,0,0,0,0,0,0,0.563903507879121,0,2.49852889812322,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0.0636471582781649,0,0,0,0.5388164241167,0.215166616178029,0,0,0,0,0,0,0,0,0,1.00636896795513,2.8851164307291 | ||
|short_description=p@chr11:111225030..111225046,- | |short_description=p@chr11:111225030..111225046,- | ||
}} | }} |
Latest revision as of 18:04, 23 July 2015
Short description: | p@chr11:111225030..111225046, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:111225030..111225046, - |
Coexpression cluster: | C442_diffuse_xeroderma_lymphoma_Burkitt_plasma_b_lymphangiectasia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.07e-91 | 24 |
pro-B cell | 4.07e-91 | 24 |
lymphocyte | 7.91e-46 | 53 |
common lymphoid progenitor | 7.91e-46 | 53 |
lymphoid lineage restricted progenitor cell | 5.89e-41 | 52 |
precursor B cell | 6.66e-31 | 3 |
mature B cell | 1.12e-21 | 2 |
pre-B-II cell | 1.12e-21 | 2 |
transitional stage B cell | 1.12e-21 | 2 |
small pre-B-II cell | 1.12e-21 | 2 |
immature B cell | 1.12e-21 | 2 |
nongranular leukocyte | 1.09e-19 | 115 |
B cell | 7.86e-18 | 14 |
hematopoietic lineage restricted progenitor cell | 2.46e-16 | 120 |
leukocyte | 2.65e-16 | 136 |
hematopoietic oligopotent progenitor cell | 2.08e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.08e-13 | 161 |
hematopoietic stem cell | 9.44e-13 | 168 |
hematopoietic cell | 5.57e-12 | 177 |
B-1 B cell | 8.62e-12 | 1 |
antibody secreting cell | 1.18e-11 | 1 |
plasma cell | 1.18e-11 | 1 |
plasmablast | 1.18e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.43e-11 | 1 |
caecum | 5.43e-11 | 1 |
midgut | 5.43e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.12e-36 | 10 |
hematologic cancer | 8.35e-15 | 51 |
immune system cancer | 8.35e-15 | 51 |
lymphatic system cancer | 8.62e-12 | 1 |
lymphosarcoma | 8.62e-12 | 1 |
genetic disease | 1.45e-11 | 1 |
monogenic disease | 1.45e-11 | 1 |
xeroderma pigmentosum | 1.45e-11 | 1 |
bone marrow cancer | 2.42e-11 | 1 |
myeloma | 2.42e-11 | 1 |
acute leukemia | 2.68e-11 | 1 |
anemia | 2.96e-11 | 1 |