FFCP PHASE1:Hg19::chr11:111224843..111224854,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:111224843..111224854,- | |||
|coexpression_cluster_id=C442 | |||
|description=CAGE_peak_at_chr11:111224843..111224854,- | |||
|id=chr11:111224843..111224854,- | |||
|ontology_enrichment_celltype=CL:0000945!4.05e-55!24;CL:0000826!4.05e-55!24;CL:0000542!6.57e-32!53;CL:0000051!6.57e-32!53;CL:0000838!3.20e-29!52;CL:0000236!4.28e-16!14;CL:0000817!4.75e-15!3;CL:0002087!1.74e-11!119;CL:0000785!6.24e-11!2;CL:0000955!6.24e-11!2;CL:0000818!6.24e-11!2;CL:0000954!6.24e-11!2;CL:0000816!6.24e-11!2;CL:0002031!1.36e-09!124;CL:0000738!4.15e-09!140;CL:0002032!4.40e-07!165;CL:0000837!4.40e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000945;8.53e-55;24!CL:0000785;2.66e-18;1!CL:0000819;2.66e-18;1!CL:0000542;8.30e-14;53!CL:0000236;3.80e-12;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.65e-55,24;CL:0000826,6.65e-55,24;CL:0000838,4.36e-25,52;CL:0000542,1.33e-24,53;CL:0000051,1.33e-24,53;CL:0000819,2.66e-18,1;CL:0000236,3.02e-11,14;CL:0002087,6.96e-11,115;CL:0002031,2.11e-10,120;CL:0000785,7.98e-10,2;CL:0000955,7.98e-10,2;CL:0000818,7.98e-10,2;CL:0000954,7.98e-10,2;CL:0000816,7.98e-10,2;CL:0000738,4.25e-09,136;CL:0002032,1.44e-07,161;CL:0000837,1.44e-07,161;CL:0000037,3.20e-07,168;CL:0000817,5.80e-07,3;CL:0000988,8.19e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0001045;8.72e-18;1!CL:0000051;8.30e-14;53!CL:0000954;7.97e-10;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.15e-17!10;DOID:2531!2.93e-09!51;DOID:0060083!2.93e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.99e-41;10!DOID:0060073;2.66e-18;1!DOID:8675;2.66e-18;1!DOID:630;8.72e-18;1!DOID:0050177;8.72e-18;1!DOID:0050427;8.72e-18;1!DOID:2355;8.72e-18;1!DOID:74;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.21e-41,10;DOID:0060073,2.66e-18,1;DOID:8675,2.66e-18,1;DOID:2355,4.44e-18,1;DOID:630,5.26e-18,1;DOID:0050177,5.26e-18,1;DOID:0050427,5.26e-18,1;DOID:74,1.03e-09,2;DOID:2531,3.04e-08,51;DOID:0060083,3.04e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.11e-07!3;UBERON:0004854!2.11e-07!3;UBERON:0009034!2.11e-07!3;UBERON:0002095!2.11e-07!3;UBERON:0004782!2.11e-07!3;UBERON:0003281!2.11e-07!3;UBERON:0009664!2.11e-07!3;UBERON:0002296!2.11e-07!3;UBERON:0005602!2.11e-07!3;UBERON:0001179!2.11e-07!3;UBERON:0006293!2.11e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;8.72e-18;1!UBERON:0001153;8.72e-18;1!UBERON:0009854;8.72e-18;1!UBERON:0002106;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.70e-17,1;UBERON:0001153,1.70e-17,1;UBERON:0001045,1.70e-17,1;UBERON:0002106,8.62e-07,3;UBERON:0004854,8.62e-07,3;UBERON:0009034,8.62e-07,3;UBERON:0002095,8.62e-07,3;UBERON:0004782,8.62e-07,3;UBERON:0003281,8.62e-07,3;UBERON:0009664,8.62e-07,3;UBERON:0002296,8.62e-07,3;UBERON:0005602,8.62e-07,3;UBERON:0001179,8.62e-07,3;UBERON:0006293,8.62e-07,3 | |||
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|short_description=p@chr11:111224843..111224854,- | |||
}} | }} |
Latest revision as of 18:04, 23 July 2015
Short description: | p@chr11:111224843..111224854, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:111224843..111224854, - |
Coexpression cluster: | C442_diffuse_xeroderma_lymphoma_Burkitt_plasma_b_lymphangiectasia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.65e-55 | 24 |
pro-B cell | 6.65e-55 | 24 |
lymphoid lineage restricted progenitor cell | 4.36e-25 | 52 |
lymphocyte | 1.33e-24 | 53 |
common lymphoid progenitor | 1.33e-24 | 53 |
B-1 B cell | 2.66e-18 | 1 |
B cell | 3.02e-11 | 14 |
nongranular leukocyte | 6.96e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 2.11e-10 | 120 |
mature B cell | 7.98e-10 | 2 |
pre-B-II cell | 7.98e-10 | 2 |
transitional stage B cell | 7.98e-10 | 2 |
small pre-B-II cell | 7.98e-10 | 2 |
immature B cell | 7.98e-10 | 2 |
leukocyte | 4.25e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.44e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.44e-07 | 161 |
hematopoietic stem cell | 3.20e-07 | 168 |
precursor B cell | 5.80e-07 | 3 |
hematopoietic cell | 8.19e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.70e-17 | 1 |
caecum | 1.70e-17 | 1 |
midgut | 1.70e-17 | 1 |
spleen | 8.62e-07 | 3 |
gastrointestinal system mesentery | 8.62e-07 | 3 |
stomach region | 8.62e-07 | 3 |
mesentery | 8.62e-07 | 3 |
gastrointestinal system serosa | 8.62e-07 | 3 |
mesentery of stomach | 8.62e-07 | 3 |
gut mesentery | 8.62e-07 | 3 |
dorsal mesentery | 8.62e-07 | 3 |
dorsal mesogastrium | 8.62e-07 | 3 |
peritoneal cavity | 8.62e-07 | 3 |
spleen primordium | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.21e-41 | 10 |
lymphatic system cancer | 2.66e-18 | 1 |
lymphosarcoma | 2.66e-18 | 1 |
anemia | 4.44e-18 | 1 |
genetic disease | 5.26e-18 | 1 |
monogenic disease | 5.26e-18 | 1 |
xeroderma pigmentosum | 5.26e-18 | 1 |
hematopoietic system disease | 1.03e-09 | 2 |
hematologic cancer | 3.04e-08 | 51 |
immune system cancer | 3.04e-08 | 51 |