FFCP PHASE1:Hg19::chr11:109898250..109898258,+: Difference between revisions
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|id=chr11:109898250..109898258,+
|short_description=p@chr11:109898250..109898258,+
|description=CAGE_peak_at_chr11:109898250..109898258,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:109898250..109898258,+ | |||
|coexpression_cluster_id=C293 | |||
|description=CAGE_peak_at_chr11:109898250..109898258,+ | |||
|id=chr11:109898250..109898258,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.97e-49!42;CL:0000860!2.62e-45!45;CL:0002009!1.77e-40!65;CL:0000766!1.24e-37!76;CL:0000557!9.90e-37!71;CL:0000738!3.79e-36!140;CL:0002194!3.64e-34!63;CL:0000576!3.64e-34!63;CL:0000040!3.64e-34!63;CL:0000559!3.64e-34!63;CL:0000839!2.18e-30!70;CL:0002087!4.01e-29!119;CL:0000763!4.03e-29!112;CL:0000049!4.03e-29!112;CL:0000037!1.88e-28!172;CL:0000566!1.88e-28!172;CL:0000988!1.35e-26!182;CL:0002031!1.68e-25!124;CL:0002393!3.32e-25!9;CL:0002397!3.32e-25!9;CL:0002032!1.28e-23!165;CL:0000837!1.28e-23!165;CL:0000767!1.23e-19!3;CL:0000842!1.63e-18!3;CL:0000224!4.95e-14!4;CL:0001014!2.34e-13!2;CL:0001016!2.34e-13!2;CL:0000134!8.74e-11!358;CL:0002320!1.81e-10!365;CL:0000219!2.59e-10!390;CL:0000840!1.01e-09!5;CL:0001029!1.01e-09!5;CL:0000080!1.58e-09!6;CL:0000034!2.05e-08!444;CL:0000048!5.25e-08!430;CL:0000723!8.15e-08!436;CL:0000094!1.15e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002393;7.86e-75;6!CL:0002397;7.86e-75;6!CL:0000767;9.53e-38;3!CL:0000766;1.29e-15;69!CL:0000576;4.26e-15;48!CL:0000094;1.34e-14;8!CL:0000081;8.83e-11;11!CL:0001014;1.23e-07;2!CL:0001016;1.23e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,7.04e-50,9;CL:0002397,7.04e-50,9;CL:0000767,9.54e-38,3;CL:0000860,1.65e-28,42;CL:0002057,1.65e-28,42;CL:0000766,2.94e-27,72;CL:0000473,8.20e-25,48;CL:0000234,8.20e-25,48;CL:0002009,4.75e-23,61;CL:0000557,6.65e-21,67;CL:0000763,8.70e-21,108;CL:0000049,8.70e-21,108;CL:0002194,1.25e-19,59;CL:0000576,1.25e-19,59;CL:0000040,1.25e-19,59;CL:0000559,1.25e-19,59;CL:0000839,1.85e-17,66;CL:0000738,3.35e-16,136;CL:0000094,1.34e-14,8;CL:0002032,1.95e-13,161;CL:0000837,1.95e-13,161;CL:0000037,8.28e-13,168;CL:0000988,4.51e-12,177;CL:0002031,3.72e-11,120;CL:0000081,8.83e-11,11;CL:0002087,1.42e-09,115;CL:0001014,1.12e-07,2;CL:0001016,1.12e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.61e-19;42!CL:0000049;7.35e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.68e-32!102;UBERON:0003061!3.68e-32!102;UBERON:0002371!3.77e-32!80;UBERON:0001474!1.27e-29!86;UBERON:0002193!7.08e-29!112;UBERON:0004765!1.34e-24!101;UBERON:0001434!1.34e-24!101;UBERON:0002405!4.38e-21!115;UBERON:0002204!3.73e-13!167;UBERON:0003081!1.23e-12!216;UBERON:0002384!4.91e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.62e-18,76;UBERON:0001474,6.86e-17,82;UBERON:0004765,2.75e-15,90;UBERON:0002405,9.32e-15,93;UBERON:0002390,6.07e-14,98;UBERON:0003061,6.07e-14,98;UBERON:0001434,1.22e-13,100;UBERON:0002193,1.54e-12,108;UBERON:0002204,1.24e-07,167 | |||
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|short_description=p@chr11:109898250..109898258,+ | |||
}} | }} |
Latest revision as of 17:58, 23 July 2015
Short description: | p@chr11:109898250..109898258, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:109898250..109898258, + |
Coexpression cluster: | C293_CD14_CD14CD16_Basophils_Peripheral_immature_Eosinophils_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 7.04e-50 | 9 |
CD14-positive, CD16-positive monocyte | 7.04e-50 | 9 |
basophil | 9.54e-38 | 3 |
classical monocyte | 1.65e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.65e-28 | 42 |
myeloid leukocyte | 2.94e-27 | 72 |
defensive cell | 8.20e-25 | 48 |
phagocyte | 8.20e-25 | 48 |
macrophage dendritic cell progenitor | 4.75e-23 | 61 |
granulocyte monocyte progenitor cell | 6.65e-21 | 67 |
myeloid cell | 8.70e-21 | 108 |
common myeloid progenitor | 8.70e-21 | 108 |
monopoietic cell | 1.25e-19 | 59 |
monocyte | 1.25e-19 | 59 |
monoblast | 1.25e-19 | 59 |
promonocyte | 1.25e-19 | 59 |
myeloid lineage restricted progenitor cell | 1.85e-17 | 66 |
leukocyte | 3.35e-16 | 136 |
granulocyte | 1.34e-14 | 8 |
hematopoietic oligopotent progenitor cell | 1.95e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-13 | 161 |
hematopoietic stem cell | 8.28e-13 | 168 |
hematopoietic cell | 4.51e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 3.72e-11 | 120 |
blood cell | 8.83e-11 | 11 |
nongranular leukocyte | 1.42e-09 | 115 |
CD1a-positive Langerhans cell | 1.12e-07 | 2 |
immature CD1a-positive Langerhans cell | 1.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.62e-18 | 76 |
bone element | 6.86e-17 | 82 |
skeletal element | 2.75e-15 | 90 |
immune system | 9.32e-15 | 93 |
hematopoietic system | 6.07e-14 | 98 |
blood island | 6.07e-14 | 98 |
skeletal system | 1.22e-13 | 100 |
hemolymphoid system | 1.54e-12 | 108 |
musculoskeletal system | 1.24e-07 | 167 |