FFCP PHASE1:Hg19::chr11:10935473..10935492,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:10935473..10935492,+ | |||
|description=CAGE_peak_at_chr11:10935473..10935492,+ | |||
|id=chr11:10935473..10935492,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.51e-81!42;CL:0000860!9.00e-75!45;CL:0002194!8.28e-53!63;CL:0000576!8.28e-53!63;CL:0000040!8.28e-53!63;CL:0000559!8.28e-53!63;CL:0002009!6.50e-51!65;CL:0000766!1.02e-50!76;CL:0000839!1.20e-46!70;CL:0000557!7.29e-46!71;CL:0000763!3.55e-33!112;CL:0000049!3.55e-33!112;CL:0002393!2.99e-28!9;CL:0002397!2.99e-28!9;CL:0002087!6.32e-27!119;CL:0000738!4.93e-26!140;CL:0002031!2.20e-22!124;CL:0000037!1.58e-20!172;CL:0000566!1.58e-20!172;CL:0002032!2.60e-19!165;CL:0000837!2.60e-19!165;CL:0000988!7.82e-19!182;CL:0000875!4.79e-11!3;CL:0002396!4.79e-11!3;CL:0000134!1.15e-10!358;CL:0000048!1.35e-10!430;CL:0000723!2.85e-10!436;CL:0002320!3.11e-10!365;CL:0000767!5.32e-10!3;CL:0000034!7.49e-10!444;CL:0000219!1.02e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000875;3.26e-38;3!CL:0002396;3.26e-38;3!CL:0000576;1.43e-32;48!CL:0000860;3.85e-27;33!CL:0002057;3.85e-27;33!CL:0000473;9.00e-21;39!CL:0000234;9.00e-21;39!CL:0002393;3.62e-19;6!CL:0002397;3.62e-19;6!CL:0000766;1.59e-14;69!CL:0000763;1.61e-11;100!CL:0002087;1.16e-08;104!CL:0000738;1.21e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.70e-64,42;CL:0002057,1.70e-64,42;CL:0000473,2.94e-56,48;CL:0000234,2.94e-56,48;CL:0002393,4.46e-49,9;CL:0002397,4.46e-49,9;CL:0002194,1.02e-44,59;CL:0000576,1.02e-44,59;CL:0000040,1.02e-44,59;CL:0000559,1.02e-44,59;CL:0002009,3.16e-43,61;CL:0000839,6.88e-40,66;CL:0000557,2.79e-39,67;CL:0000875,3.48e-38,3;CL:0002396,3.48e-38,3;CL:0000766,1.74e-36,72;CL:0000763,6.51e-24,108;CL:0000049,6.51e-24,108;CL:0002087,2.27e-22,115;CL:0002031,2.23e-21,120;CL:0000738,1.10e-18,136;CL:0002032,1.55e-15,161;CL:0000837,1.55e-15,161;CL:0000037,8.07e-15,168;CL:0000988,5.57e-14,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.62e-46;42!UBERON:0000358;5.15e-14;1!CL:0000049;7.17e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.39e-42!80;UBERON:0001474!9.54e-39!86;UBERON:0002390!3.58e-35!102;UBERON:0003061!3.58e-35!102;UBERON:0004765!1.30e-33!101;UBERON:0001434!1.30e-33!101;UBERON:0002193!3.70e-31!112;UBERON:0002405!2.41e-28!115;UBERON:0002204!4.49e-24!167;UBERON:0003081!3.03e-16!216;UBERON:0002384!2.62e-10!375;UBERON:0000926!2.49e-08!448;UBERON:0004120!2.49e-08!448;UBERON:0006603!2.49e-08!448;UBERON:0003127!7.56e-07!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.64e-34,76;UBERON:0001474,6.64e-32,82;UBERON:0004765,5.83e-29,90;UBERON:0002405,5.50e-28,93;UBERON:0002390,1.72e-26,98;UBERON:0003061,1.72e-26,98;UBERON:0001434,6.18e-26,100;UBERON:0002193,6.51e-24,108;UBERON:0002204,6.43e-15,167;UBERON:0003081,7.27e-14,203;UBERON:0000926,2.79e-08,315;UBERON:0004120,2.79e-08,315;UBERON:0006603,2.79e-08,315 | |||
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| ||
|short_description=p@chr11:10935473..10935492,+ | |||
}} | }} |
Latest revision as of 17:58, 23 July 2015
Short description: | p@chr11:10935473..10935492, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:10935473..10935492, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.70e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.70e-64 | 42 |
defensive cell | 2.94e-56 | 48 |
phagocyte | 2.94e-56 | 48 |
intermediate monocyte | 4.46e-49 | 9 |
CD14-positive, CD16-positive monocyte | 4.46e-49 | 9 |
monopoietic cell | 1.02e-44 | 59 |
monocyte | 1.02e-44 | 59 |
monoblast | 1.02e-44 | 59 |
promonocyte | 1.02e-44 | 59 |
macrophage dendritic cell progenitor | 3.16e-43 | 61 |
myeloid lineage restricted progenitor cell | 6.88e-40 | 66 |
granulocyte monocyte progenitor cell | 2.79e-39 | 67 |
non-classical monocyte | 3.48e-38 | 3 |
CD14-low, CD16-positive monocyte | 3.48e-38 | 3 |
myeloid leukocyte | 1.74e-36 | 72 |
myeloid cell | 6.51e-24 | 108 |
common myeloid progenitor | 6.51e-24 | 108 |
nongranular leukocyte | 2.27e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 2.23e-21 | 120 |
leukocyte | 1.10e-18 | 136 |
hematopoietic oligopotent progenitor cell | 1.55e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.55e-15 | 161 |
hematopoietic stem cell | 8.07e-15 | 168 |
hematopoietic cell | 5.57e-14 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.64e-34 | 76 |
bone element | 6.64e-32 | 82 |
skeletal element | 5.83e-29 | 90 |
immune system | 5.50e-28 | 93 |
hematopoietic system | 1.72e-26 | 98 |
blood island | 1.72e-26 | 98 |
skeletal system | 6.18e-26 | 100 |
hemolymphoid system | 6.51e-24 | 108 |
musculoskeletal system | 6.43e-15 | 167 |
lateral plate mesoderm | 7.27e-14 | 203 |
mesoderm | 2.79e-08 | 315 |
mesoderm-derived structure | 2.79e-08 | 315 |
presumptive mesoderm | 2.79e-08 | 315 |