FFCP PHASE1:Hg19::chr11:103720267..103720289,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:103720267..103720289,- | |||
|coexpression_cluster_id=C731 | |coexpression_cluster_id=C731 | ||
|description=CAGE_peak_at_chr11:103720267..103720289,- | |description=CAGE_peak_at_chr11:103720267..103720289,- | ||
|id=chr11:103720267..103720289,- | |id=chr11:103720267..103720289,- | ||
|ontology_enrichment_celltype=CL:0000136!3.44e-16!15;CL:0002334!3.75e-10!12;CL:0002615!2.18e-09!3;CL:0002580!6.61e-09!3;CL:0002579!1.43e-08!3;CL:0002617!7.73e-07!2 | |ontology_enrichment_celltype=CL:0000136!3.44e-16!15;CL:0002334!3.75e-10!12;CL:0002615!2.18e-09!3;CL:0002580!6.61e-09!3;CL:0002579!1.43e-08!3;CL:0002617!7.73e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002615;6.24e-24;3!CL:0002580;3.61e-22;3!CL:0002334;1.60e-21;12!CL:0000136;4.45e-21;13!CL:0002617;1.22e-16;2!CL:0002623;7.48e-11;3!CL:0002579;8.06e-11;3!CL:0002616;3.72e-09;1!CL:0002581;4.89e-09;1!CL:0000622;7.59e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,6.25e-24,3;CL:0002580,1.49e-22,3;CL:0002334,1.03e-21,12;CL:0000136,3.33e-18,15;CL:0002617,1.18e-16,2;CL:0002579,8.06e-11,3;CL:0002623,8.47e-11,3;CL:0002616,3.87e-09,1;CL:0002581,4.89e-09,1;CL:0000622,8.17e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.53e-08;1!UBERON:0004874;1.53e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.98e-16!6;UBERON:0002358!2.98e-16!6;UBERON:0003684!2.98e-16!6;UBERON:0001178!2.98e-16!6;UBERON:0007023!6.57e-15!115;UBERON:0009569!2.85e-13!113;UBERON:0004457!3.88e-13!12;UBERON:0000042!3.88e-13!12;UBERON:0002417!2.19e-11!61;UBERON:0000916!2.19e-11!61;UBERON:0002100!3.57e-10!216;UBERON:0000310!1.59e-09!10;UBERON:0000466!4.75e-09!126;UBERON:0006947!9.99e-09!3;UBERON:0004054!9.99e-09!3;UBERON:0001443!1.41e-08!11;UBERON:0002323!1.20e-07!46;UBERON:0002553!2.13e-07!70;UBERON:0004458!5.53e-07!49;UBERON:0000464!6.22e-07!104;UBERON:0005406!9.09e-07!2 | |ontology_enrichment_uberon=UBERON:0003688!2.98e-16!6;UBERON:0002358!2.98e-16!6;UBERON:0003684!2.98e-16!6;UBERON:0001178!2.98e-16!6;UBERON:0007023!6.57e-15!115;UBERON:0009569!2.85e-13!113;UBERON:0004457!3.88e-13!12;UBERON:0000042!3.88e-13!12;UBERON:0002417!2.19e-11!61;UBERON:0000916!2.19e-11!61;UBERON:0002100!3.57e-10!216;UBERON:0000310!1.59e-09!10;UBERON:0000466!4.75e-09!126;UBERON:0006947!9.99e-09!3;UBERON:0004054!9.99e-09!3;UBERON:0001443!1.41e-08!11;UBERON:0002323!1.20e-07!46;UBERON:0002553!2.13e-07!70;UBERON:0004458!5.53e-07!49;UBERON:0000464!6.22e-07!104;UBERON:0005406!9.09e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.47e-31;6!UBERON:0002358;1.47e-31;6!UBERON:0003684;1.47e-31;6!UBERON:0001178;1.47e-31;6!UBERON:0000310;2.87e-26;10!UBERON:0001443;7.61e-24;11!UBERON:0004457;5.13e-21;9!UBERON:0000042;5.13e-21;9!UBERON:0005406;1.79e-16;2!UBERON:0006947;8.68e-11;3!UBERON:0004054;8.68e-11;3!UBERON:0001301;6.91e-09;1!UBERON:0000996;8.68e-09;1!UBERON:0001000;1.53e-08;1!UBERON:0000989;1.53e-08;1!UBERON:0008811;1.53e-08;1!UBERON:0005352;1.53e-08;1!UBERON:0005904;2.63e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.47e-31,6;UBERON:0002358,1.47e-31,6;UBERON:0003684,1.47e-31,6;UBERON:0001178,1.47e-31,6;UBERON:0000310,1.76e-26,10;UBERON:0001443,4.90e-24,11;UBERON:0005406,1.87e-16,2;UBERON:0004457,9.91e-16,12;UBERON:0000042,9.91e-16,12;UBERON:0006947,9.82e-11,3;UBERON:0004054,9.82e-11,3;UBERON:0009569,5.99e-09,112;UBERON:0001301,6.65e-09,1;UBERON:0000996,8.36e-09,1;UBERON:0002100,1.02e-08,199;UBERON:0002553,1.30e-08,61;UBERON:0000989,1.65e-08,1;UBERON:0008811,1.65e-08,1;UBERON:0006258,1.65e-08,1;UBERON:0005876,1.65e-08,1;UBERON:0004874,1.65e-08,1;UBERON:0001000,1.91e-08,1;UBERON:0005352,1.91e-08,1;UBERON:0005904,2.88e-08,4 | |||
|phase1_expression=21.0746919953846,13.4883330051319,36.0843274485686,11.0080628188443,12.5149106439641,13.0850778615055,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,1.55605517699883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.857867961948885,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98486246255021,1.84154367945675,1.68396056659844,4.86928767171664,1.53512174720011,0.321707842287215,7.42090332224955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88588442577902,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0.611030144933625,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,3.4945333648406,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0.446342914883745,1.5452198671947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.943225830597996,0,0,0,0,0,0,0.5013797880454,0.919036730290385,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,3.12605604493237,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,1.48863353516788,0,0,0,0,0,0.455324382702595,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0.116241425368125,0,0,0,1.19502933965765,6.22133695632683,0,0,0,0.846774100381858,0,0,0,0,0,0,0,1.02662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.751871343838829,0.515663103788617,0,0,0,0,2.19100916473955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0.869046000142011,0,0.445530107947154,0.606351566874658,0,0,0,0.286888821570705,0.665320713092027,0,0,0,0,0,0,0.813792356631477,2.66302709674205,0,0 | |phase1_expression=21.0746919953846,13.4883330051319,36.0843274485686,11.0080628188443,12.5149106439641,13.0850778615055,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,1.55605517699883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.857867961948885,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98486246255021,1.84154367945675,1.68396056659844,4.86928767171664,1.53512174720011,0.321707842287215,7.42090332224955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88588442577902,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0.611030144933625,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,3.4945333648406,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0.446342914883745,1.5452198671947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.943225830597996,0,0,0,0,0,0,0.5013797880454,0.919036730290385,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,3.12605604493237,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,1.48863353516788,0,0,0,0,0,0.455324382702595,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0.116241425368125,0,0,0,1.19502933965765,6.22133695632683,0,0,0,0.846774100381858,0,0,0,0,0,0,0,1.02662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.751871343838829,0.515663103788617,0,0,0,0,2.19100916473955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0.869046000142011,0,0.445530107947154,0.606351566874658,0,0,0,0.286888821570705,0.665320713092027,0,0,0,0,0,0,0.813792356631477,2.66302709674205,0,0 | ||
|short_description=p@chr11:103720267..103720289,- | |short_description=p@chr11:103720267..103720289,- | ||
}} | }} |
Latest revision as of 17:37, 23 July 2015
Short description: | p@chr11:103720267..103720289, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:103720267..103720289, - |
Coexpression cluster: | C731_Adipocyte_Preadipocyte_adipose_Wilms_salivary_Mesenchymal_epididymis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 6.25e-24 | 3 |
preadipocyte of the breast | 1.49e-22 | 3 |
preadipocyte | 1.03e-21 | 12 |
fat cell | 3.33e-18 | 15 |
adipocyte of breast | 1.18e-16 | 2 |
omentum preadipocyte | 8.06e-11 | 3 |
acinar cell of salivary gland | 8.47e-11 | 3 |
perirenal adipocyte cell | 3.87e-09 | 1 |
perirenal preadipocyte | 4.89e-09 | 1 |
acinar cell | 8.17e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.47e-31 | 6 |
peritoneum | 1.47e-31 | 6 |
abdominal cavity | 1.47e-31 | 6 |
visceral peritoneum | 1.47e-31 | 6 |
breast | 1.76e-26 | 10 |
chest | 4.90e-24 | 11 |
perirenal fat | 1.87e-16 | 2 |
cavity lining | 9.91e-16 | 12 |
serous membrane | 9.91e-16 | 12 |
male genital duct | 9.82e-11 | 3 |
internal male genitalia | 9.82e-11 | 3 |
subdivision of trunk | 5.99e-09 | 112 |
epididymis | 6.65e-09 | 1 |
vagina | 8.36e-09 | 1 |
trunk | 1.02e-08 | 199 |
anatomical cavity | 1.30e-08 | 61 |
penis | 1.65e-08 | 1 |
intromittent organ | 1.65e-08 | 1 |
lateral plate mesenchyme | 1.65e-08 | 1 |
undifferentiated genital tubercle | 1.65e-08 | 1 |
somatopleure | 1.65e-08 | 1 |
vas deferens | 1.91e-08 | 1 |
spermatic cord | 1.91e-08 | 1 |
duct of male reproductive system | 2.88e-08 | 4 |