FFCP PHASE1:Hg19::chr10:99600200..99600213,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:99600200..99600213,+ | |||
|description=CAGE_peak_at_chr10:99600200..99600213,+ | |description=CAGE_peak_at_chr10:99600200..99600213,+ | ||
|id=chr10:99600200..99600213,+ | |id=chr10:99600200..99600213,+ | ||
|ontology_enrichment_celltype=CL:0000147!2.56e-12!14;CL:0000149!7.38e-10!4;CL:0002057!1.37e-08!42;CL:0000148!3.27e-08!10;CL:0000541!3.27e-08!10;CL:0000860!8.92e-08!45;CL:0002586!1.06e-07!3 | |ontology_enrichment_celltype=CL:0000147!2.56e-12!14;CL:0000149!7.38e-10!4;CL:0002057!1.37e-08!42;CL:0000148!3.27e-08!10;CL:0000541!3.27e-08!10;CL:0000860!8.92e-08!45;CL:0002586!1.06e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.23e-17;3!CL:0000322;2.29e-17;3!CL:0000167;4.53e-14;1!CL:0000164;4.53e-14;1!CL:0000502;4.53e-14;1!CL:0000172;4.53e-14;1!CL:0002566;4.53e-14;1!CL:0000173;4.53e-14;1!CL:0000148;6.37e-12;10!CL:0000147;1.13e-08;14 | |ontology_enrichment_celltype_v019=CL:0002567;1.23e-17;3!CL:0000322;2.29e-17;3!CL:0000167;4.53e-14;1!CL:0000164;4.53e-14;1!CL:0000502;4.53e-14;1!CL:0000172;4.53e-14;1!CL:0002566;4.53e-14;1!CL:0000173;4.53e-14;1!CL:0000148;6.37e-12;10!CL:0000147;1.13e-08;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0002567,9.94e-18,3;CL:0000322,1.94e-17,3;CL:0000167,5.15e-14,1;CL:0000164,5.15e-14,1;CL:0000502,5.15e-14,1;CL:0000172,5.15e-14,1;CL:0000173,5.15e-14,1;CL:0002351,5.15e-14,1;CL:0002566,5.85e-14,1;CL:0000148,6.26e-12,10;CL:0000541,6.26e-12,10;CL:0000147,1.12e-08,14 | |||
|ontology_enrichment_development_v019=CL:0002351;4.53e-14;1!UBERON:0007297;1.81e-07;2 | |ontology_enrichment_development_v019=CL:0002351;4.53e-14;1!UBERON:0007297;1.81e-07;2 | ||
|ontology_enrichment_disease=DOID:305!9.62e-08!106;DOID:0050687!3.49e-07!143 | |ontology_enrichment_disease=DOID:305!9.62e-08!106;DOID:0050687!3.49e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1909;4.34e-26;2!DOID:3910;1.63e-25;2!DOID:4430;4.53e-14;1!DOID:3908;8.29e-11;5!DOID:1325;5.66e-08;7!DOID:3904;5.66e-08;7!DOID:4074;1.12e-07;2!DOID:4905;1.12e-07;2!DOID:3498;1.12e-07;2 | |ontology_enrichment_disease_v019=DOID:1909;4.34e-26;2!DOID:3910;1.63e-25;2!DOID:4430;4.53e-14;1!DOID:3908;8.29e-11;5!DOID:1325;5.66e-08;7!DOID:3904;5.66e-08;7!DOID:4074;1.12e-07;2!DOID:4905;1.12e-07;2!DOID:3498;1.12e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,2.45e-26,2;DOID:3910,1.27e-25,2;DOID:4430,5.15e-14,1;DOID:3908,7.51e-11,5;DOID:1325,5.28e-08,7;DOID:3904,5.28e-08,7;DOID:4074,1.05e-07,2;DOID:4905,1.05e-07,2;DOID:3498,1.05e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001781!1.06e-07!3;UBERON:0001782!1.06e-07!3;UBERON:0005424!1.06e-07!3 | |ontology_enrichment_uberon=UBERON:0001781!1.06e-07!3;UBERON:0001782!1.06e-07!3;UBERON:0005424!1.06e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.63e-25;2!UBERON:0002173;1.63e-25;2!UBERON:0002186;1.63e-25;2!UBERON:0004821;2.29e-17;3!UBERON:0007499;2.29e-17;3!UBERON:0003215;2.29e-17;3!UBERON:0010368;2.29e-17;3!UBERON:0009911;2.29e-17;3!UBERON:0002299;2.29e-17;3!UBERON:0006524;2.29e-17;3!UBERON:0008874;2.29e-17;3!UBERON:0002169;2.29e-17;3!UBERON:0004894;2.29e-17;3!UBERON:0001301;1.18e-13;1!UBERON:0000997;1.18e-13;1!UBERON:0005056;1.18e-13;1!UBERON:0004176;1.18e-13;1!UBERON:0009856;2.84e-13;4!UBERON:0000058;1.11e-11;10!UBERON:0001905;1.81e-07;2!UBERON:0002757;1.81e-07;2!UBERON:0010134;1.81e-07;2!UBERON:0005408;1.81e-07;2!UBERON:0001899;1.81e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0004903;1.63e-25;2!UBERON:0002173;1.63e-25;2!UBERON:0002186;1.63e-25;2!UBERON:0004821;2.29e-17;3!UBERON:0007499;2.29e-17;3!UBERON:0003215;2.29e-17;3!UBERON:0010368;2.29e-17;3!UBERON:0009911;2.29e-17;3!UBERON:0002299;2.29e-17;3!UBERON:0006524;2.29e-17;3!UBERON:0008874;2.29e-17;3!UBERON:0002169;2.29e-17;3!UBERON:0004894;2.29e-17;3!UBERON:0001301;1.18e-13;1!UBERON:0000997;1.18e-13;1!UBERON:0005056;1.18e-13;1!UBERON:0004176;1.18e-13;1!UBERON:0009856;2.84e-13;4!UBERON:0000058;1.11e-11;10!UBERON:0001905;1.81e-07;2!UBERON:0002757;1.81e-07;2!UBERON:0010134;1.81e-07;2!UBERON:0005408;1.81e-07;2!UBERON:0001899;1.81e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.27e-25,2;UBERON:0002173,1.27e-25,2;UBERON:0002186,1.27e-25,2;UBERON:0004821,1.94e-17,3;UBERON:0003215,1.94e-17,3;UBERON:0010368,1.94e-17,3;UBERON:0009911,1.94e-17,3;UBERON:0002299,1.94e-17,3;UBERON:0006524,1.94e-17,3;UBERON:0008874,1.94e-17,3;UBERON:0002169,1.94e-17,3;UBERON:0004894,1.94e-17,3;UBERON:0001301,7.55e-14,1;UBERON:0000997,1.83e-13,1;UBERON:0005056,1.83e-13,1;UBERON:0001905,2.40e-07,2;UBERON:0002757,2.40e-07,2;UBERON:0010134,2.40e-07,2;UBERON:0005408,2.40e-07,2;UBERON:0001899,2.40e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0.755751887377619,0,0,0.411167888021826,0.929119112685311,0.28769239232215,0.512321413058201,0,0.689491361473237,1.29096936716765,0,0.376484679085209,0,0,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,2.03193261734941,2.29193055334967,0,1.71072446022705,0.308482478109971,0.901029173531752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0.293016358543788,0,0,1.42068073403207,0,0,0,0,0,0.111308705022906,0,0,0,0,0,1.22722419002586,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,1.2517279311405,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34797542718508,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,1.07791637155815,0.261177619741208,1.7472666824203,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950403028674658,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97143852804142,3.71104933608458,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0.366857197043358,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,1.07140367175657,0,0,0.455324382702595,0,0,0.171488009437418,0.0679697329768317,0,0.118193840883968,0.111231401892069,0,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0.233939463462106,0,0,0,0,0,0,0,2.35158648180761,0,2.12108892391463,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0.755751887377619,0,0,0.411167888021826,0.929119112685311,0.28769239232215,0.512321413058201,0,0.689491361473237,1.29096936716765,0,0.376484679085209,0,0,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,2.03193261734941,2.29193055334967,0,1.71072446022705,0.308482478109971,0.901029173531752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0.293016358543788,0,0,1.42068073403207,0,0,0,0,0,0.111308705022906,0,0,0,0,0,1.22722419002586,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,1.2517279311405,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34797542718508,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,1.07791637155815,0.261177619741208,1.7472666824203,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950403028674658,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97143852804142,3.71104933608458,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0.366857197043358,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,1.07140367175657,0,0,0.455324382702595,0,0,0.171488009437418,0.0679697329768317,0,0.118193840883968,0.111231401892069,0,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0.233939463462106,0,0,0,0,0,0,0,2.35158648180761,0,2.12108892391463,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p@chr10:99600200..99600213,+ | |short_description=p@chr10:99600200..99600213,+ | ||
}} | }} |
Latest revision as of 17:18, 23 July 2015
Short description: | p@chr10:99600200..99600213, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:99600200..99600213, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 9.94e-18 | 3 |
pneumocyte | 1.94e-17 | 3 |
peptide hormone secreting cell | 5.15e-14 | 1 |
enteroendocrine cell | 5.15e-14 | 1 |
type D enteroendocrine cell | 5.15e-14 | 1 |
somatostatin secreting cell | 5.15e-14 | 1 |
pancreatic D cell | 5.15e-14 | 1 |
progenitor cell of endocrine pancreas | 5.15e-14 | 1 |
dark melanocyte | 5.85e-14 | 1 |
melanocyte | 6.26e-12 | 10 |
melanoblast | 6.26e-12 | 10 |
pigment cell | 1.12e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.27e-25 | 2 |
alveolar duct | 1.27e-25 | 2 |
bronchiole | 1.27e-25 | 2 |
pulmonary alveolus epithelium | 1.94e-17 | 3 |
alveolus | 1.94e-17 | 3 |
pulmonary lobule | 1.94e-17 | 3 |
lobule | 1.94e-17 | 3 |
alveolus of lung | 1.94e-17 | 3 |
alveolar system | 1.94e-17 | 3 |
pulmonary acinus | 1.94e-17 | 3 |
alveolar sac | 1.94e-17 | 3 |
alveolar wall | 1.94e-17 | 3 |
epididymis | 7.55e-14 | 1 |
mammalian vulva | 1.83e-13 | 1 |
external female genitalia | 1.83e-13 | 1 |
pineal body | 2.40e-07 | 2 |
regional part of epithalamus | 2.40e-07 | 2 |
secretory circumventricular organ | 2.40e-07 | 2 |
circumventricular organ | 2.40e-07 | 2 |
epithalamus | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.45e-26 | 2 |
lung adenocarcinoma | 1.27e-25 | 2 |
somatostatinoma | 5.15e-14 | 1 |
non-small cell lung carcinoma | 7.51e-11 | 5 |
bronchus cancer | 5.28e-08 | 7 |
bronchogenic carcinoma | 5.28e-08 | 7 |
pancreas adenocarcinoma | 1.05e-07 | 2 |
pancreatic carcinoma | 1.05e-07 | 2 |
pancreatic ductal adenocarcinoma | 1.05e-07 | 2 |