FFCP PHASE1:Hg19::chr10:97023912..97023930,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:97023912..97023930,- | |||
|description=CAGE_peak_at_chr10:97023912..97023930,- | |description=CAGE_peak_at_chr10:97023912..97023930,- | ||
|id=chr10:97023912..97023930,- | |id=chr10:97023912..97023930,- | ||
|ontology_enrichment_celltype=CL:0000066!3.18e-27!254;CL:0002076!3.08e-18!43;CL:0000223!4.88e-14!59;CL:0002159!1.34e-11!13;CL:0000076!2.17e-11!62;CL:0002251!1.54e-09!21;CL:0002368!1.50e-08!13;CL:0000349!8.37e-08!3;CL:0002577!8.37e-08!3;CL:0002166!1.06e-07!3;CL:0002621!1.31e-07!3;CL:0000322!3.67e-07!3 | |ontology_enrichment_celltype=CL:0000066!3.18e-27!254;CL:0002076!3.08e-18!43;CL:0000223!4.88e-14!59;CL:0002159!1.34e-11!13;CL:0000076!2.17e-11!62;CL:0002251!1.54e-09!21;CL:0002368!1.50e-08!13;CL:0000349!8.37e-08!3;CL:0002577!8.37e-08!3;CL:0002166!1.06e-07!3;CL:0002621!1.31e-07!3;CL:0000322!3.67e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.20e-24;19!CL:0002577;7.31e-16;3!CL:0002166;1.09e-15;3!CL:0002621;2.16e-15;3!CL:0002159;6.40e-12;14!CL:0002536;2.52e-11;2!CL:0000317;1.81e-10;2!CL:1000448;1.81e-10;2!CL:0002308;1.81e-10;2!CL:0002140;1.81e-10;2!CL:0002537;8.74e-10;5!CL:0000322;9.72e-08;3!CL:0002541;2.30e-07;3 | |ontology_enrichment_celltype_v019=CL:0000349;1.20e-24;19!CL:0002577;7.31e-16;3!CL:0002166;1.09e-15;3!CL:0002621;2.16e-15;3!CL:0002159;6.40e-12;14!CL:0002536;2.52e-11;2!CL:0000317;1.81e-10;2!CL:1000448;1.81e-10;2!CL:0002308;1.81e-10;2!CL:0002140;1.81e-10;2!CL:0002537;8.74e-10;5!CL:0000322;9.72e-08;3!CL:0002541;2.30e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.99e-25,19;CL:0002577,5.71e-16,3;CL:0002166,9.85e-16,3;CL:0002621,1.61e-15,3;CL:0000066,1.16e-12,253;CL:0002159,4.76e-12,14;CL:0002536,2.59e-11,2;CL:0000317,1.14e-10,2;CL:1000448,1.14e-10,2;CL:0002308,1.14e-10,2;CL:0002140,1.14e-10,2;CL:0002537,9.41e-10,5;CL:0002076,8.83e-08,42;CL:0000322,1.00e-07,3;CL:0002541,1.93e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!1.64e-17!14;DOID:305!2.31e-08!106 | |ontology_enrichment_disease=DOID:1749!1.64e-17!14;DOID:305!2.31e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr10:97023912..97023930,- | |short_description=p@chr10:97023912..97023930,- | ||
}} | }} |
Latest revision as of 16:58, 23 July 2015
Short description: | p@chr10:97023912..97023930, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:97023912..97023930, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.99e-25 | 19 |
placental epithelial cell | 5.71e-16 | 3 |
epithelial cell of Malassez | 9.85e-16 | 3 |
gingival epithelial cell | 1.61e-15 | 3 |
epithelial cell | 1.16e-12 | 253 |
general ecto-epithelial cell | 4.76e-12 | 14 |
amniotic epithelial cell | 2.59e-11 | 2 |
sebum secreting cell | 1.14e-10 | 2 |
epithelial cell of sweat gland | 1.14e-10 | 2 |
epithelial cell of skin gland | 1.14e-10 | 2 |
acinar cell of sebaceous gland | 1.14e-10 | 2 |
amnion mesenchymal stem cell | 9.41e-10 | 5 |
endo-epithelial cell | 8.83e-08 | 42 |
pneumocyte | 1.00e-07 | 3 |
chorionic membrane mesenchymal stem cell | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.96e-34 | 14 |
membranous layer | 2.96e-34 | 14 |
extraembryonic structure | 3.63e-19 | 24 |
amnion | 3.83e-18 | 7 |
chorion | 9.15e-18 | 7 |
somatic layer of lateral plate mesoderm | 7.65e-16 | 8 |
gingival epithelium | 1.61e-15 | 3 |
organ component layer | 1.80e-15 | 66 |
placenta | 4.25e-12 | 4 |
allantois | 4.25e-12 | 4 |
jaw skeleton | 6.38e-12 | 4 |
splanchnocranium | 6.38e-12 | 4 |
skin gland | 1.14e-10 | 2 |
epidermis gland | 1.14e-10 | 2 |
gland of integumental system | 1.14e-10 | 2 |
sebaceous gland | 1.14e-10 | 2 |
skin sebaceous gland | 1.14e-10 | 2 |
sweat gland | 1.14e-10 | 2 |
sweat gland placode | 1.14e-10 | 2 |
sebaceous gland placode | 1.14e-10 | 2 |
epithelium of mucosa | 7.16e-10 | 8 |
primary subdivision of cranial skeletal system | 1.26e-09 | 5 |
protuberance | 4.33e-08 | 6 |
pharyngeal arch | 4.33e-08 | 6 |
embryonic head | 4.33e-08 | 6 |
mucosa | 5.18e-08 | 20 |
pulmonary alveolus epithelium | 1.00e-07 | 3 |
alveolus | 1.00e-07 | 3 |
pulmonary lobule | 1.00e-07 | 3 |
lobule | 1.00e-07 | 3 |
alveolus of lung | 1.00e-07 | 3 |
alveolar system | 1.00e-07 | 3 |
pulmonary acinus | 1.00e-07 | 3 |
alveolar sac | 1.00e-07 | 3 |
alveolar wall | 1.00e-07 | 3 |
respiratory system epithelium | 1.13e-07 | 28 |
egg chorion | 1.93e-07 | 3 |