FFCP PHASE1:Hg19::chr10:91100385..91100400,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_AF026943_5end | |association_with_transcript=26bp_to_AF026943_5end | ||
|cluster_id=chr10:91100385..91100400,+ | |||
|coexpression_cluster_id=C174 | |||
|description=CAGE_peak_1_at_AF026943_5end | |description=CAGE_peak_1_at_AF026943_5end | ||
|id=chr10:91100385..91100400,+ | |id=chr10:91100385..91100400,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.89e-18!42;CL:0000860!1.54e-17!45;CL:0000766!8.42e-12!76;CL:0002009!2.83e-11!65;CL:0000557!3.76e-11!71;CL:0002194!7.94e-11!63;CL:0000576!7.94e-11!63;CL:0000040!7.94e-11!63;CL:0000559!7.94e-11!63;CL:0000839!1.97e-10!70;CL:0000763!8.86e-07!112;CL:0000049!8.86e-07!112 | |ontology_enrichment_celltype=CL:0002057!3.89e-18!42;CL:0000860!1.54e-17!45;CL:0000766!8.42e-12!76;CL:0002009!2.83e-11!65;CL:0000557!3.76e-11!71;CL:0002194!7.94e-11!63;CL:0000576!7.94e-11!63;CL:0000040!7.94e-11!63;CL:0000559!7.94e-11!63;CL:0000839!1.97e-10!70;CL:0000763!8.86e-07!112;CL:0000049!8.86e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-52;33!CL:0002057;1.13e-52;33!CL:0000473;1.80e-40;39!CL:0000234;1.80e-40;39!CL:0000576;9.39e-25;48!CL:0000766;1.03e-15;69!CL:0000763;1.42e-11;100!CL:0000775;2.23e-09;3!CL:0002379;1.18e-07;1!CL:0002087;1.30e-07;104!CL:0000511;2.17e-07;1!CL:0002625;2.17e-07;1!CL:0000216;2.17e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.25e-45,42;CL:0002057,1.25e-45,42;CL:0000473,4.64e-44,48;CL:0000234,4.64e-44,48;CL:0002194,1.80e-34,59;CL:0000576,1.80e-34,59;CL:0000040,1.80e-34,59;CL:0000559,1.80e-34,59;CL:0000766,2.98e-34,72;CL:0002009,3.12e-33,61;CL:0000839,1.84e-30,66;CL:0000557,5.91e-30,67;CL:0000763,1.59e-21,108;CL:0000049,1.59e-21,108;CL:0000738,3.02e-16,136;CL:0002087,6.18e-16,115;CL:0002031,4.09e-15,120;CL:0002032,4.48e-13,161;CL:0000837,4.48e-13,161;CL:0000037,2.35e-12,168;CL:0000988,1.63e-11,177;CL:0000775,1.89e-09,3;CL:0002379,1.30e-07,1;CL:0000511,1.58e-07,1;CL:0002625,1.58e-07,1;CL:0000216,1.58e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;6.92e-32;42!CL:0000049;2.52e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;1.18e-07;1!DOID:3565;1.18e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.30e-07,1;DOID:3565,1.30e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.02e-09!80;UBERON:0001474!1.98e-08!86;UBERON:0004765!2.32e-08!101;UBERON:0001434!2.32e-08!101;UBERON:0002390!1.74e-07!102;UBERON:0003061!1.74e-07!102 | |ontology_enrichment_uberon=UBERON:0002371!1.02e-09!80;UBERON:0001474!1.98e-08!86;UBERON:0004765!2.32e-08!101;UBERON:0001434!2.32e-08!101;UBERON:0002390!1.74e-07!102;UBERON:0003061!1.74e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.17e-07;1!UBERON:0001343;2.17e-07;1!UBERON:0004910;2.17e-07;1!UBERON:0004813;2.17e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.38e-26,76;UBERON:0001474,7.83e-24,82;UBERON:0004765,2.16e-21,90;UBERON:0002405,1.39e-20,93;UBERON:0002390,2.40e-19,98;UBERON:0003061,2.40e-19,98;UBERON:0001434,6.94e-19,100;UBERON:0002193,3.28e-17,108;UBERON:0002204,4.51e-11,167;UBERON:0003081,1.77e-09,203;UBERON:0001136,1.58e-07,1;UBERON:0001343,1.58e-07,1;UBERON:0004910,1.58e-07,1;UBERON:0005154,1.58e-07,1;UBERON:0005295,1.58e-07,1;UBERON:0004813,1.58e-07,1;UBERON:0005297,1.58e-07,1;UBERON:0005294,1.58e-07,1;UBERON:0010141,1.58e-07,1;UBERON:0005891,1.58e-07,1 | |||
|phase1_expression=0,0,0,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,3.74000110018796,1.0246428261164,1.89185783910868,1.37898272294647,0,0,0,0.272906150057846,0.224723484445085,8.87643287875617,0.641858054152187,3.19668562899521,5.27762080298746,4.3882004676759,6.39337125799041,17.1223450790865,1.13477044938228,6.85104473895132,4.01997864410789,5.21482918420201,2.38907729175628,19.3727840842678,2.94622108790052,15.1901945971625,0,0,0.419317291016752,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384273959177026,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.591534000199219,0.168584690078102,0,0,0,0.474541238222193,0.404493924480493,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,1.2162378064119,0,0,0,0,0,0.289562613335158,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,2.99602809578873,2.99161459204025,0.414415513436035,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.384417447767103,0,0,0,0.308419387605311,0,0.164254312027618,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92456187557541,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0.295547618953547,0,0.10893846351899,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,1.20258735531594,0,0,0.330991955875499,0,0,0.284609546029793,0.138674673013139,0.347119476670262,0,0,0,0,0,0.0730893170861856,0,0,0,0.225980740780532,0,0,0,0.586654148204409,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,0,0.0524545881349981,0.105600336519406,0,0,0.714695326373367,0,0,1.08599920350743,0.864221491201268,0,0,0.164185041498678,0,0,0.293104467356165,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0.151649117541648,0,2.58792401667989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,4.16052397660995,0,0,0,0.176689145945881,0,1.52048196587765,0,0,1.21543982470953,0.414775308455192,0,0,0,1.31043939538565,0.245772908753719,0,0,0.213383459388282,0.344429959321631,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0.733714394086716,0.115525666150338,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0.118193840883968,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.299823467774787,0,0,0.0802413666891683,0.730336388246517,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0.112131862580613,0,0,0,0,0,0.215166616178029,0,0,0.320182037633146,0,0.179650404213174,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,3.74000110018796,1.0246428261164,1.89185783910868,1.37898272294647,0,0,0,0.272906150057846,0.224723484445085,8.87643287875617,0.641858054152187,3.19668562899521,5.27762080298746,4.3882004676759,6.39337125799041,17.1223450790865,1.13477044938228,6.85104473895132,4.01997864410789,5.21482918420201,2.38907729175628,19.3727840842678,2.94622108790052,15.1901945971625,0,0,0.419317291016752,0.112328631146495,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384273959177026,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.591534000199219,0.168584690078102,0,0,0,0.474541238222193,0.404493924480493,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,1.2162378064119,0,0,0,0,0,0.289562613335158,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,2.99602809578873,2.99161459204025,0.414415513436035,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.384417447767103,0,0,0,0.308419387605311,0,0.164254312027618,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92456187557541,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0.295547618953547,0,0.10893846351899,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,1.20258735531594,0,0,0.330991955875499,0,0,0.284609546029793,0.138674673013139,0.347119476670262,0,0,0,0,0,0.0730893170861856,0,0,0,0.225980740780532,0,0,0,0.586654148204409,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,0,0.0524545881349981,0.105600336519406,0,0,0.714695326373367,0,0,1.08599920350743,0.864221491201268,0,0,0.164185041498678,0,0,0.293104467356165,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0.151649117541648,0,2.58792401667989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,4.16052397660995,0,0,0,0.176689145945881,0,1.52048196587765,0,0,1.21543982470953,0.414775308455192,0,0,0,1.31043939538565,0.245772908753719,0,0,0.213383459388282,0.344429959321631,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0.733714394086716,0.115525666150338,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0.118193840883968,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.299823467774787,0,0,0.0802413666891683,0.730336388246517,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0.112131862580613,0,0,0,0,0,0.215166616178029,0,0,0.320182037633146,0,0.179650404213174,0,0,0,0,0.201273793591026,0 | ||
|short_description=p1@AF026943 | |short_description=p1@AF026943 | ||
}} | }} |
Latest revision as of 16:38, 23 July 2015
Short description: | p1@AF026943 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AF026943_5end |
Coexpression cluster: | C174_CD14_Neutrophils_Smooth_mesothelioma_embryonic_Monocytederived_Eosinophils |
Association with transcript: | 26bp_to_AF026943_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.25e-45 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-45 | 42 |
defensive cell | 4.64e-44 | 48 |
phagocyte | 4.64e-44 | 48 |
monopoietic cell | 1.80e-34 | 59 |
monocyte | 1.80e-34 | 59 |
monoblast | 1.80e-34 | 59 |
promonocyte | 1.80e-34 | 59 |
myeloid leukocyte | 2.98e-34 | 72 |
macrophage dendritic cell progenitor | 3.12e-33 | 61 |
myeloid lineage restricted progenitor cell | 1.84e-30 | 66 |
granulocyte monocyte progenitor cell | 5.91e-30 | 67 |
myeloid cell | 1.59e-21 | 108 |
common myeloid progenitor | 1.59e-21 | 108 |
leukocyte | 3.02e-16 | 136 |
nongranular leukocyte | 6.18e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 4.09e-15 | 120 |
hematopoietic oligopotent progenitor cell | 4.48e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.48e-13 | 161 |
hematopoietic stem cell | 2.35e-12 | 168 |
hematopoietic cell | 1.63e-11 | 177 |
neutrophil | 1.89e-09 | 3 |
meningothelial cell | 1.30e-07 | 1 |
androgen binding protein secreting cell | 1.58e-07 | 1 |
seminiferous tubule epithelial cell | 1.58e-07 | 1 |
Sertoli cell | 1.58e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.38e-26 | 76 |
bone element | 7.83e-24 | 82 |
skeletal element | 2.16e-21 | 90 |
immune system | 1.39e-20 | 93 |
hematopoietic system | 2.40e-19 | 98 |
blood island | 2.40e-19 | 98 |
skeletal system | 6.94e-19 | 100 |
hemolymphoid system | 3.28e-17 | 108 |
musculoskeletal system | 4.51e-11 | 167 |
lateral plate mesoderm | 1.77e-09 | 203 |
mesothelium | 1.58e-07 | 1 |
seminiferous tubule of testis | 1.58e-07 | 1 |
epithelium of male gonad | 1.58e-07 | 1 |
epithelial cord | 1.58e-07 | 1 |
sex cord | 1.58e-07 | 1 |
seminiferous tubule epithelium | 1.58e-07 | 1 |
testis sex cord | 1.58e-07 | 1 |
genital ridge | 1.58e-07 | 1 |
primitive sex cord of indifferent gonad | 1.58e-07 | 1 |
coelomic epithelium | 1.58e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.30e-07 | 1 |
meningioma | 1.30e-07 | 1 |