FFCP PHASE1:Hg19::chr10:90988088..90988122,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:90988088..90988122,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_at_chr10:90988088..90988122,- | |description=CAGE_peak_at_chr10:90988088..90988122,- | ||
|id=chr10:90988088..90988122,- | |id=chr10:90988088..90988122,- | ||
|ontology_enrichment_celltype=CL:0002194!1.22e-13!63;CL:0000576!1.22e-13!63;CL:0000040!1.22e-13!63;CL:0000559!1.22e-13!63;CL:0002009!8.85e-13!65;CL:0000839!1.07e-12!70;CL:0000557!2.60e-12!71;CL:0000766!2.22e-11!76;CL:0002057!5.56e-09!42;CL:0000860!8.57e-08!45;CL:0002087!2.51e-07!119;CL:0002031!4.59e-07!124;CL:0000763!6.92e-07!112;CL:0000049!6.92e-07!112 | |ontology_enrichment_celltype=CL:0002194!1.22e-13!63;CL:0000576!1.22e-13!63;CL:0000040!1.22e-13!63;CL:0000559!1.22e-13!63;CL:0002009!8.85e-13!65;CL:0000839!1.07e-12!70;CL:0000557!2.60e-12!71;CL:0000766!2.22e-11!76;CL:0002057!5.56e-09!42;CL:0000860!8.57e-08!45;CL:0002087!2.51e-07!119;CL:0002031!4.59e-07!124;CL:0000763!6.92e-07!112;CL:0000049!6.92e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000235;2.25e-40;6!CL:0000840;2.03e-15;5!CL:0000990;1.84e-10;8!CL:0000451;1.20e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.25e-40,6;CL:0000840,2.03e-15,5;CL:0001029,2.03e-15,5;CL:0002194,6.59e-12,59;CL:0000576,6.59e-12,59;CL:0000040,6.59e-12,59;CL:0000559,6.59e-12,59;CL:0002009,1.75e-11,61;CL:0000839,1.56e-10,66;CL:0000990,1.84e-10,8;CL:0000557,2.33e-10,67;CL:0000766,1.46e-09,72;CL:0000451,1.20e-08,10;CL:0000763,2.14e-07,108;CL:0000049,2.14e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.21e-10;1!UBERON:0005795;4.38e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;6.90e-29;3!DOID:127;6.90e-29;3!DOID:0060072;7.64e-22;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.28e-29,3;DOID:127,6.28e-29,3;DOID:0060072,7.12e-22,4 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.83e-11!80;UBERON:0004765!1.09e-09!101;UBERON:0001434!1.09e-09!101;UBERON:0001474!1.22e-09!86;UBERON:0002390!3.70e-08!102;UBERON:0003061!3.70e-08!102;UBERON:0002204!5.85e-08!167;UBERON:0002405!1.12e-07!115 | |ontology_enrichment_uberon=UBERON:0002371!1.83e-11!80;UBERON:0004765!1.09e-09!101;UBERON:0001434!1.09e-09!101;UBERON:0001474!1.22e-09!86;UBERON:0002390!3.70e-08!102;UBERON:0003061!3.70e-08!102;UBERON:0002204!5.85e-08!167;UBERON:0002405!1.12e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.21e-10;1!UBERON:0001785;1.21e-10;1!UBERON:0002464;1.21e-10;1!UBERON:0004904;1.21e-10;1!UBERON:0001021;1.21e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.10e-10,1;UBERON:0001785,1.10e-10,1;UBERON:0002464,1.10e-10,1;UBERON:0004904,1.10e-10,1;UBERON:0001021,1.10e-10,1;UBERON:0003902,1.10e-10,1;UBERON:0005425,1.10e-10,1;UBERON:0002371,5.32e-09,76;UBERON:0001474,2.94e-08,82;UBERON:0004765,2.02e-07,90;UBERON:0002405,3.83e-07,93 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0.0787107813136792,0.393364276848904,0,0,0,0.30120591877825,0.369754010166788,0.154934401160603,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0.895661896959697,1.6194683300949,0.515151135268373,0.145398238779565,0.377875943688809,0.485168122375632,0,0,0,0.28769239232215,0.768482119587302,0.47296445977717,0,0.645484683583826,0,0.376484679085209,0.272906150057846,0.449446968890169,0,0,0,0.329851300186716,0.199463657621632,0.426224750532694,0.580418477257168,0.56738522469114,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0,0.316462387440884,0.633765858935825,0.212604299965044,0,0.112328631146495,0.300353785683013,0,0.285012743741249,0.59675003159727,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.25618263945135,0,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0,0.267440195783507,0,2.43806866313962,0,0,0,0,0.289693037921647,0,0,0.189069634328136,0,0.175669571386252,0.0654895377488563,0,0.370784442784429,11.6837061715686,11.1443031871531,15.5560813807072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0.354668382198357,0.560677600142307,0,0,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0,0.624320153660641,0,0,0.23486899728753,0.323745888736263,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,1.44375896333917,0.473227200159376,0.337169380156203,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0.492434012174795,3.7440682422278,3.26988557035202,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,3.4214489204541,0.205654985406647,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.199945982364114,7.29742683847143,6.52934218861764,12.6500363689819,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24900292158013,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0.215714200818617,0,0,0,0.30239029332968,0,0.153461973288062,0.280660094433074,0.384417447767103,0,0,0,0,0,0.0821271560138091,0,0.348631135379878,0.120859449591622,0.200506470303285,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0.255679882248303,0.0890320356467374,0.165284915360978,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0.54907405947211,0.117812402345686,0.202182481573316,1.58510321173008,0,0,0.731140468893853,0,0.136499911407986,0.141405431953713,0,0,0,0.876901770507525,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.0711418433484141,0,0.199579371432817,0.383010740264733,0,0.324621940274555,0.842391534340376,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,1.23087398947712,0,0,0,0.18714054040822,0.439524537815682,0,0,0,0,0,0.307160702099232,0.994147647766298,0.140669416410513,0,0.16480387422676,0.844501632511974,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0.176915129006678,1.22206028986725,0,0,0.104421949505455,0,0,0,0,0,0.971121518136371,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0.160317640503067,0,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0.236349546921671,0,0.0674035438541849,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.236417121897595,0,0,0.537862017998534,0,0,0,0.25426853765475,2.71499800876856,2.5926644736038,1.30634944043764,0,0,0,0,0.293104467356165,0,0.517131825446202,0.13223260174269,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0,0,0.138348634936231,0,0.151649117541648,0,0,0.468334905806882,0.144921028610825,0,0,0.554805861502613,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0.406870733204662,0.181848659202559,0,0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| ||
|short_description=p@chr10:90988088..90988122,- | |short_description=p@chr10:90988088..90988122,- | ||
}} | }} |
Latest revision as of 16:34, 23 July 2015
Short description: | p@chr10:90988088..90988122, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:90988088..90988122, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.25e-40 | 6 |
immature conventional dendritic cell | 2.03e-15 | 5 |
common dendritic progenitor | 2.03e-15 | 5 |
monopoietic cell | 6.59e-12 | 59 |
monocyte | 6.59e-12 | 59 |
monoblast | 6.59e-12 | 59 |
promonocyte | 6.59e-12 | 59 |
macrophage dendritic cell progenitor | 1.75e-11 | 61 |
myeloid lineage restricted progenitor cell | 1.56e-10 | 66 |
conventional dendritic cell | 1.84e-10 | 8 |
granulocyte monocyte progenitor cell | 2.33e-10 | 67 |
myeloid leukocyte | 1.46e-09 | 72 |
dendritic cell | 1.20e-08 | 10 |
myeloid cell | 2.14e-07 | 108 |
common myeloid progenitor | 2.14e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.10e-10 | 1 |
cranial nerve | 1.10e-10 | 1 |
nerve trunk | 1.10e-10 | 1 |
nerve connecting eye with brain | 1.10e-10 | 1 |
nerve | 1.10e-10 | 1 |
retinal neural layer | 1.10e-10 | 1 |
presumptive neural retina | 1.10e-10 | 1 |
bone marrow | 5.32e-09 | 76 |
bone element | 2.94e-08 | 82 |
skeletal element | 2.02e-07 | 90 |
immune system | 3.83e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.28e-29 | 3 |
leiomyoma | 6.28e-29 | 3 |
benign neoplasm | 7.12e-22 | 4 |