FFCP PHASE1:Hg19::chr10:90988013..90988023,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:90988013..90988023,- to FFCP PHASE1:Hg19::chr10:90988013..90988023,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:90988013..90988023,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_at_chr10:90988013..90988023,- | |||
|id=chr10:90988013..90988023,- | |||
|ontology_enrichment_celltype=CL:0002194!1.04e-09!63;CL:0000576!1.04e-09!63;CL:0000040!1.04e-09!63;CL:0000559!1.04e-09!63;CL:0002009!3.04e-09!65;CL:0000839!3.31e-08!70;CL:0000557!5.11e-08!71;CL:0000235!8.71e-08!10;CL:0000766!3.73e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000840;1.13e-30;5!CL:0000235;2.28e-30;6!CL:0000990;1.02e-20;8!CL:0000451;4.34e-17;10!CL:0002615;7.25e-08;3!CL:0002592;7.25e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,1.25e-30,5;CL:0001029,1.25e-30,5;CL:0000235,1.86e-30,6;CL:0000990,1.09e-20,8;CL:0000451,4.59e-17,10;CL:0002194,6.16e-12,59;CL:0000576,6.16e-12,59;CL:0000040,6.16e-12,59;CL:0000559,6.16e-12,59;CL:0002009,1.50e-11,61;CL:0000839,1.11e-10,66;CL:0000557,1.60e-10,67;CL:0000766,8.56e-10,72;CL:0002592,6.34e-08,3;CL:0002615,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.31e-21;1!UBERON:0003056;7.25e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.39e-07!80;UBERON:0004765!2.50e-07!101;UBERON:0001434!2.50e-07!101;UBERON:0002405!6.02e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.31e-21;1!UBERON:0001785;6.31e-21;1!UBERON:0002464;6.31e-21;1!UBERON:0004904;6.31e-21;1!UBERON:0001021;6.31e-21;1!UBERON:0003714;3.70e-11;2!UBERON:0005162;3.70e-11;2!UBERON:0000122;3.70e-11;2!UBERON:0003498;7.25e-08;3!UBERON:0005985;7.25e-08;3!UBERON:0001621;7.25e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.31e-21,1;UBERON:0001785,6.31e-21,1;UBERON:0002464,6.31e-21,1;UBERON:0004904,6.31e-21,1;UBERON:0001021,6.31e-21,1;UBERON:0003902,6.31e-21,1;UBERON:0005425,6.31e-21,1;UBERON:0003714,3.70e-11,2;UBERON:0005162,3.70e-11,2;UBERON:0000122,3.70e-11,2;UBERON:0002371,2.80e-09,76;UBERON:0001474,1.34e-08,82;UBERON:0001621,6.34e-08,3;UBERON:0004765,7.91e-08,90;UBERON:0002405,1.42e-07,93;UBERON:0002390,3.51e-07,98;UBERON:0003061,3.51e-07,98;UBERON:0001434,4.91e-07,100 | |||
|phase1_expression=0,0.642301571672949,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0.77272670290256,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,2.27183175558278,2.08955684759121,5.05240249971688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.891786973732369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.50677127429638,2.10833939483032,0,0,0,0.144781306667579,0,0,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0.117812402345686,0.202182481573316,1.58510321173008,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0.138348634936231,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0.342976018874837,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.642301571672949,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0.77272670290256,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,2.27183175558278,2.08955684759121,5.05240249971688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.891786973732369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.50677127429638,2.10833939483032,0,0,0,0.144781306667579,0,0,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0.117812402345686,0.202182481573316,1.58510321173008,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0.138348634936231,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0.342976018874837,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:90988013..90988023,- | |||
}} | }} |
Latest revision as of 16:34, 23 July 2015
Short description: | p@chr10:90988013..90988023, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:90988013..90988023, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 1.25e-30 | 5 |
common dendritic progenitor | 1.25e-30 | 5 |
macrophage | 1.86e-30 | 6 |
conventional dendritic cell | 1.09e-20 | 8 |
dendritic cell | 4.59e-17 | 10 |
monopoietic cell | 6.16e-12 | 59 |
monocyte | 6.16e-12 | 59 |
monoblast | 6.16e-12 | 59 |
promonocyte | 6.16e-12 | 59 |
macrophage dendritic cell progenitor | 1.50e-11 | 61 |
myeloid lineage restricted progenitor cell | 1.11e-10 | 66 |
granulocyte monocyte progenitor cell | 1.60e-10 | 67 |
myeloid leukocyte | 8.56e-10 | 72 |
smooth muscle cell of the coronary artery | 6.34e-08 | 3 |
adipocyte of omentum tissue | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.31e-21 | 1 |
cranial nerve | 6.31e-21 | 1 |
nerve trunk | 6.31e-21 | 1 |
nerve connecting eye with brain | 6.31e-21 | 1 |
nerve | 6.31e-21 | 1 |
retinal neural layer | 6.31e-21 | 1 |
presumptive neural retina | 6.31e-21 | 1 |
neural tissue | 3.70e-11 | 2 |
multi cell component structure | 3.70e-11 | 2 |
neuron projection bundle | 3.70e-11 | 2 |
bone marrow | 2.80e-09 | 76 |
bone element | 1.34e-08 | 82 |
coronary artery | 6.34e-08 | 3 |
skeletal element | 7.91e-08 | 90 |
immune system | 1.42e-07 | 93 |
hematopoietic system | 3.51e-07 | 98 |
blood island | 3.51e-07 | 98 |
skeletal system | 4.91e-07 | 100 |