FFCP PHASE1:Hg19::chr10:90974591..90974623,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:90974591..90974623,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_at_chr10:90974591..90974623,- | |description=CAGE_peak_at_chr10:90974591..90974623,- | ||
|id=chr10:90974591..90974623,- | |id=chr10:90974591..90974623,- | ||
|ontology_enrichment_celltype=CL:0002009!2.77e-09!65;CL:0002194!3.81e-09!63;CL:0000576!3.81e-09!63;CL:0000040!3.81e-09!63;CL:0000559!3.81e-09!63;CL:0000557!2.92e-08!71;CL:0000839!7.44e-08!70 | |ontology_enrichment_celltype=CL:0002009!2.77e-09!65;CL:0002194!3.81e-09!63;CL:0000576!3.81e-09!63;CL:0000040!3.81e-09!63;CL:0000559!3.81e-09!63;CL:0000557!2.92e-08!71;CL:0000839!7.44e-08!70 | ||
|ontology_enrichment_celltype_v019=CL:0000235;7.23e-63;6!CL:0000840;6.23e-17;5!CL:0000990;1.77e-11;8!CL:0000451;1.74e-09;10!CL:0000473;3.03e-08;39!CL:0000234;3.03e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.26e-63,6;CL:0000840,6.23e-17,5;CL:0001029,6.23e-17,5;CL:0002194,2.80e-13,59;CL:0000576,2.80e-13,59;CL:0000040,2.80e-13,59;CL:0000559,2.80e-13,59;CL:0002009,8.20e-13,61;CL:0000839,9.07e-12,66;CL:0000557,1.41e-11,67;CL:0000990,1.77e-11,8;CL:0000766,1.05e-10,72;CL:0000451,1.74e-09,10;CL:0000473,1.42e-07,48;CL:0000234,1.42e-07,48;CL:0000763,9.00e-07,108;CL:0000049,9.00e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.03e-07!80;UBERON:0001474!2.39e-07!86;UBERON:0000062!9.99e-07!511 | |ontology_enrichment_uberon=UBERON:0002371!2.03e-07!80;UBERON:0001474!2.39e-07!86;UBERON:0000062!9.99e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;5.62e-12;1!UBERON:0006518;5.62e-12;1!UBERON:0008949;5.62e-12;1!UBERON:0000101;5.62e-12;1!UBERON:0002167;5.62e-12;1!UBERON:0007195;1.19e-11;1!UBERON:0002426;1.19e-11;1!UBERON:0003831;1.19e-11;1!UBERON:0003898;1.19e-11;1!UBERON:0004830;1.19e-11;1!UBERON:0003830;1.19e-11;1!UBERON:0005175;1.19e-11;1!UBERON:0001774;1.19e-11;1!UBERON:0001103;1.19e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,1.66e-12,90;UBERON:0002371,1.91e-12,76;UBERON:0002171,6.97e-12,1;UBERON:0006518,6.97e-12,1;UBERON:0008949,6.97e-12,1;UBERON:0000101,6.97e-12,1;UBERON:0002167,6.97e-12,1;UBERON:0002426,7.76e-12,1;UBERON:0003831,7.76e-12,1;UBERON:0003898,7.76e-12,1;UBERON:0004830,7.76e-12,1;UBERON:0003830,7.76e-12,1;UBERON:0005175,7.76e-12,1;UBERON:0001774,7.76e-12,1;UBERON:0001103,7.76e-12,1;UBERON:0010084,7.76e-12,1;UBERON:0007195,1.32e-11,1;UBERON:0001474,1.91e-11,82;UBERON:0001434,4.13e-11,100;UBERON:0002405,6.09e-10,93;UBERON:0002390,2.28e-09,98;UBERON:0003061,2.28e-09,98;UBERON:0002204,1.11e-08,167;UBERON:0002193,2.23e-08,108 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0.895661896959697,0.32389366601898,0.515151135268373,0,0.377875943688809,0.242584061187816,0.232429036905685,0,0.619412741790207,0.28769239232215,0,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0.422510572623884,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0.32592226663359,0,0,0,0,0,0,0,0.390178042679635,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,14.2800853208061,10.2736545006568,9.83888907839602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0,0.169560592310488,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,1.23108503043699,3.04205544681009,2.37809859661965,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,1.06617584622764,0,0,0,0,2.43247561282381,5.52482800575339,2.10833939483032,0,0,0,0.289562613335158,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0.229628896329213,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0.192190067365106,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0.37428108081644,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0,0,0.844501632511974,0.398495976502139,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0.969332746095218,0.185536196323703,0,0,0,0,0.341380344856499,0.254253650292766,0,0.344743373241465,0,0.173624994933292,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0.067401132980677,1.60515529459758,0.468528891450678,0,0,1.21390189767046,0.394584402849391,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0.195984794828755,0,0,0.171986032471617,0,0.146178634172371,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0,0.271808412147228,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0,0.558564802544508,0,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0,0.275078873194468,0,0.2249738915515,0,0,0.335434687599266,0.0788057072991982,0,0.105600336519406,0,0,0,0.662091970365432,0,0,2.5926644736038,0,0,0,0.170388021785422,0.113312091520126,0.293104467356165,0,0.387848869084652,0.26446520348538,0,0,0.213574825135389,0,2.07119527673598,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0,0.0620964029413835,0,0.124980407962107,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,0,0,0.353378291891762,0.38582807654183,0,0,0,0,0,0,0,0,0,0.491545817507439,0.211312123358627,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0.705351887381368,0,0,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0.196295437002051,0.11796972334774,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0.992422356778588,0,0.127762427639595,0.535701835878287,0,0,0.227662191351298,0.0887023701626388,0,0.171488009437418,0,0,0.118193840883968,0.222462803784138,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0.347716544605159,0.801711364730253,0,0,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0,0.118920090777569,0.11294608203896,0,0,0.231522474323834,0.437119121007915,0,0,0.235676547101626,0,0,0,0.339854229375634,0.563903507879121,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,1.11598505450025,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.103432995861895,0,0,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0.404234377916439,0,0.342233301085281,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0.895661896959697,0.32389366601898,0.515151135268373,0,0.377875943688809,0.242584061187816,0.232429036905685,0,0.619412741790207,0.28769239232215,0,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0.422510572623884,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0.32592226663359,0,0,0,0,0,0,0,0.390178042679635,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,14.2800853208061,10.2736545006568,9.83888907839602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0,0.169560592310488,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,1.23108503043699,3.04205544681009,2.37809859661965,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,1.06617584622764,0,0,0,0,2.43247561282381,5.52482800575339,2.10833939483032,0,0,0,0.289562613335158,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0.229628896329213,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0.192190067365106,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0.37428108081644,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0,0,0.844501632511974,0.398495976502139,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0.969332746095218,0.185536196323703,0,0,0,0,0.341380344856499,0.254253650292766,0,0.344743373241465,0,0.173624994933292,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0.067401132980677,1.60515529459758,0.468528891450678,0,0,1.21390189767046,0.394584402849391,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0.195984794828755,0,0,0.171986032471617,0,0.146178634172371,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0,0.271808412147228,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0,0.558564802544508,0,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0,0.275078873194468,0,0.2249738915515,0,0,0.335434687599266,0.0788057072991982,0,0.105600336519406,0,0,0,0.662091970365432,0,0,2.5926644736038,0,0,0,0.170388021785422,0.113312091520126,0.293104467356165,0,0.387848869084652,0.26446520348538,0,0,0.213574825135389,0,2.07119527673598,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0,0.0620964029413835,0,0.124980407962107,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,0,0,0.353378291891762,0.38582807654183,0,0,0,0,0,0,0,0,0,0.491545817507439,0.211312123358627,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0.705351887381368,0,0,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0.196295437002051,0.11796972334774,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0.992422356778588,0,0.127762427639595,0.535701835878287,0,0,0.227662191351298,0.0887023701626388,0,0.171488009437418,0,0,0.118193840883968,0.222462803784138,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0.347716544605159,0.801711364730253,0,0,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0,0.118920090777569,0.11294608203896,0,0,0.231522474323834,0.437119121007915,0,0,0.235676547101626,0,0,0,0.339854229375634,0.563903507879121,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,1.11598505450025,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.103432995861895,0,0,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0.404234377916439,0,0.342233301085281,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:90974591..90974623,- | |short_description=p@chr10:90974591..90974623,- | ||
}} | }} |
Latest revision as of 16:34, 23 July 2015
Short description: | p@chr10:90974591..90974623, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:90974591..90974623, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.26e-63 | 6 |
immature conventional dendritic cell | 6.23e-17 | 5 |
common dendritic progenitor | 6.23e-17 | 5 |
monopoietic cell | 2.80e-13 | 59 |
monocyte | 2.80e-13 | 59 |
monoblast | 2.80e-13 | 59 |
promonocyte | 2.80e-13 | 59 |
macrophage dendritic cell progenitor | 8.20e-13 | 61 |
myeloid lineage restricted progenitor cell | 9.07e-12 | 66 |
granulocyte monocyte progenitor cell | 1.41e-11 | 67 |
conventional dendritic cell | 1.77e-11 | 8 |
myeloid leukocyte | 1.05e-10 | 72 |
dendritic cell | 1.74e-09 | 10 |
defensive cell | 1.42e-07 | 48 |
phagocyte | 1.42e-07 | 48 |
myeloid cell | 9.00e-07 | 108 |
common myeloid progenitor | 9.00e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 1.66e-12 | 90 |
bone marrow | 1.91e-12 | 76 |
lower lobe of right lung | 6.97e-12 | 1 |
right lung lobe | 6.97e-12 | 1 |
lower lobe of lung | 6.97e-12 | 1 |
lobe of lung | 6.97e-12 | 1 |
right lung | 6.97e-12 | 1 |
chest muscle | 7.76e-12 | 1 |
respiratory system muscle | 7.76e-12 | 1 |
skeletal muscle of trunk | 7.76e-12 | 1 |
respiratory system skeletal muscle | 7.76e-12 | 1 |
thoracic segment muscle | 7.76e-12 | 1 |
chest organ | 7.76e-12 | 1 |
muscle of trunk | 7.76e-12 | 1 |
diaphragm | 7.76e-12 | 1 |
future diaphragm | 7.76e-12 | 1 |
stroma of bone marrow | 1.32e-11 | 1 |
bone element | 1.91e-11 | 82 |
skeletal system | 4.13e-11 | 100 |
immune system | 6.09e-10 | 93 |
hematopoietic system | 2.28e-09 | 98 |
blood island | 2.28e-09 | 98 |
musculoskeletal system | 1.11e-08 | 167 |
hemolymphoid system | 2.23e-08 | 108 |